Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G7380 Aethionema arabicum HOM05D008070 ORTHO05D001888 3.5e-83 311.6 163 100.0
AL1G37150 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 8.2e-56 220.7 158 72.2
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 2.4e-55 219.2 158 71.5
Sp1g20800 Schrenkiella parvula HOM05D008070 ORTHO05D001888 2.4e-55 219.2 154 70.8
AT1G23350 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 4.1e-55 218.4 160 68.8
Thhalv10008931m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 6.5e-53 211.1 158 69.6
BcaC06g35034 Brassica carinata HOM05D008070 ORTHO05D001888 4.2e-52 208.4 162 68.5
BolC7t42570H Brassica oleracea HOM05D008070 ORTHO05D001888 9.4e-52 207.2 162 67.9
CARHR023800 Cardamine hirsuta HOM05D008070 ORTHO05D001888 1.2e-51 206.8 162 67.9
BcaB03g14151 Brassica carinata HOM05D008070 ORTHO05D001888 1.8e-50 203.0 161 66.5
BraA07t29145Z Brassica rapa HOM05D008070 ORTHO05D001888 2.3e-50 202.6 162 67.3
BcaB03g11935 Brassica carinata HOM05D008070 ORTHO05D001888 3.3e-49 198.7 154 67.5
BcaC07g39196 Brassica carinata HOM05D008070 ORTHO05D001888 2.2e-48 196.1 163 66.3
BolC8t49825H Brassica oleracea HOM05D008070 ORTHO05D001888 2.2e-48 196.1 163 66.3
A08p28210 Brassica napus HOM05D008070 ORTHO05D001888 2.8e-48 195.7 163 66.3
BraA08t34752Z Brassica rapa HOM05D008070 ORTHO05D001888 2.8e-48 195.7 163 66.3
C08p21860 Brassica napus HOM05D008070 ORTHO05D001888 9.1e-47 190.7 163 65.0
BcaC05g26248 Brassica carinata HOM05D008070 ORTHO05D001888 2.6e-46 189.1 161 64.6
C05p22620 Brassica napus HOM05D008070 ORTHO05D001888 2.6e-46 189.1 161 64.6
BolC5t30961H Brassica oleracea HOM05D008070 ORTHO05D001888 2.6e-46 189.1 161 64.6
BcaB07g32331 Brassica carinata HOM05D008070 ORTHO05D001888 3.6e-43 178.7 163 60.7
AL2G29930 Arabidopsis lyrata HOM05D008070 ORTHO05D001888 8.3e-40 167.5 134 61.9
AT1G70540 Arabidopsis thaliana HOM05D008070 ORTHO05D001888 1.4e-39 166.8 134 61.9
Carub.0002s1726 Capsella rubella HOM05D008070 ORTHO05D001888 3.1e-39 165.6 157 56.1
Thhalv10019249m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 4.5e-38 161.8 160 52.5
Sp5g25690 Schrenkiella parvula HOM05D008070 ORTHO05D001888 7.7e-38 161.0 134 60.4
BraA02t06717Z Brassica rapa HOM05D008070 ORTHO05D001888 1.3e-37 160.2 163 52.1
BcaC03g15202 Brassica carinata HOM05D008070 ORTHO05D001888 1.7e-37 159.8 163 52.1
C02p27870 Brassica napus HOM05D008070 ORTHO05D001888 1.7e-37 159.8 163 52.1
BolC2t08833H Brassica oleracea HOM05D008070 ORTHO05D001888 1.7e-37 159.8 163 52.1
A02p16620 Brassica napus HOM05D008070 ORTHO05D001888 3.8e-37 158.7 157 52.9
A09p41290 Brassica napus HOM05D008070 ORTHO05D001888 1.9e-36 156.4 129 63.6
CARHR063750 Cardamine hirsuta HOM05D008070 ORTHO05D001888 2.5e-36 156.0 134 59.7
BraA09t39622Z Brassica rapa HOM05D008070 ORTHO05D001888 4.2e-36 155.2 129 63.6
THA.LOC104822979 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 8.3e-32 141.0 163 46.0
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 6.6e-29 131.3 133 53.4
C07p20460 Brassica napus HOM05D001342 ORTHO05D001286 3.7e-24 115.5 104 61.5
A07p13910 Brassica napus HOM05D001342 ORTHO05D001286 8.3e-24 114.4 104 62.5
Aa31LG4G10410 Aethionema arabicum HOM05D008070 ORTHO05D001888 2.4e-23 112.8 159 40.3
BcaB05g24587 Brassica carinata HOM05D008070 ORTHO05D001888 7.8e-22 107.8 103 53.4
Sed0022593 Sechium edule HOM05D008070 ORTHO05D001888 3.9e-21 105.5 132 41.7
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 4.3e-20 102.1 137 41.6
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 1.2e-19 100.5 131 42.0
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 2.1e-19 99.8 145 36.6
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 8.0e-19 97.8 154 36.4
MELO3C010682.2 Cucumis melo HOM05D008070 ORTHO05D001888 8.0e-19 97.8 145 36.6
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 3.7e-16 89.0 135 40.0
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 3.7e-16 89.0 135 40.0
CiPaw.05G184900 Carya illinoinensis HOM05D008070 ORTHO05D001888 3.7e-16 89.0 148 35.1
TWI36G0098 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 6.4e-16 88.2 145 35.2
CANSAT01G1404 Cannabis sativa HOM05D008070 ORTHO05D001888 8.3e-16 87.8 130 36.9
MELO3C011974.2 Cucumis melo HOM05D008070 ORTHO05D001888 4.1e-15 85.5 162 34.6
Duzib251G0841 Durio zibethinus HOM05D008070 ORTHO05D001888 6.0e-14 81.6 162 34.0
Sed0024894 Sechium edule HOM05D008070 ORTHO05D001888 7.8e-14 81.3 164 34.1
QL03p058723 Quercus lobata HOM05D010056 ORTHO05D001888 1.3e-13 80.5 151 33.8
TWI75G1444 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 1.3e-13 80.5 153 32.0
Sed0022116 Sechium edule HOM05D008070 ORTHO05D001888 1.7e-13 80.1 165 33.3
CsaV3_5G031330 Cucumis sativus L. HOM05D008070 ORTHO05D001888 3.0e-13 79.3 162 34.0
Manes.13G026900 Manihot esculenta HOM05D008070 ORTHO05D001888 5.0e-13 78.6 155 34.8
Aa31LG2G9780 Aethionema arabicum HOM05D009121 ORTHO05D001888 1.5e-12 77.0 156 33.3
QL03p058730 Quercus lobata HOM05D008070 ORTHO05D001888 3.3e-12 75.9 146 32.2
THA.LOC104809586 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 5.6e-12 75.1 141 33.3
BcaC09g47911 Brassica carinata HOM05D005742 ORTHO05D001888 9.5e-12 74.3 136 32.4
BolC1t05594H Brassica oleracea HOM05D005742 ORTHO05D001888 9.5e-12 74.3 136 32.4
BcaB08g37374 Brassica carinata HOM05D009121 ORTHO05D001888 1.6e-11 73.6 154 32.5
BNapus_Darmor_BZH_scaffold_118p00010 Brassica napus HOM05D005742 ORTHO05D001888 2.1e-11 73.2 136 32.4
BraA01t04423Z Brassica rapa HOM05D005742 ORTHO05D001888 2.1e-11 73.2 136 32.4
Ciclev10032926m.g Citrus clementina HOM05D008070 ORTHO05D001888 2.1e-11 73.2 159 32.1
C08p48520 Brassica napus HOM05D009121 ORTHO05D001888 2.8e-11 72.8 154 32.5
BolC8t52391H Brassica oleracea HOM05D009121 ORTHO05D001888 2.8e-11 72.8 154 32.5
Manes.12G025200 Manihot esculenta HOM05D008070 ORTHO05D001888 2.8e-11 72.8 153 28.1
BcaC05g30549 Brassica carinata HOM05D005742 ORTHO05D001888 3.6e-11 72.4 136 31.6
A09p64670 Brassica napus HOM05D009121 ORTHO05D001888 3.6e-11 72.4 154 32.5
BraA09t41825Z Brassica rapa HOM05D009121 ORTHO05D001888 3.6e-11 72.4 154 32.5
CiPaw.06G069400 Carya illinoinensis HOM05D008070 ORTHO05D001888 6.2e-11 71.6 164 31.7
Thhalv10022426m.g Eutrema salsugineum HOM05D005742 ORTHO05D001888 8.0e-11 71.2 153 32.0
THA.LOC104818886 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 8.0e-11 71.2 133 32.3
AL3G17770 Arabidopsis lyrata HOM05D005742 ORTHO05D001888 1.1e-10 70.9 136 31.6
THA.LOC104819351 Tarenaya hassleriana HOM05D009121 ORTHO05D001888 1.1e-10 70.9 152 29.6
AT3G36659 Arabidopsis thaliana HOM05D005742 ORTHO05D001888 1.4e-10 70.5 136 32.4
QL04p082607 Quercus lobata HOM05D010056 ORTHO05D001888 1.4e-10 70.5 120 35.0
Eucgr.H02532 Eucalyptus grandis HOM05D008070 ORTHO05D001888 1.8e-10 70.1 132 31.8
THA.LOC104802706 Tarenaya hassleriana HOM05D005742 ORTHO05D001888 1.8e-10 70.1 134 35.8
TAR622G1131 Trochodendron aralioides HOM05D008070 ORTHO05D001888 1.8e-10 70.1 169 32.0
Cpa.g.sc69.89 Carica papaya HOM05D008070 ORTHO05D001888 2.3e-10 69.7 158 31.6
BcaC07g38628 Brassica carinata HOM05D009121 ORTHO05D001888 3.1e-10 69.3 153 31.4
COL.COLO4_24233 Corchorus olitorius HOM05D008070 ORTHO05D001888 4.0e-10 68.9 151 31.1
TAR629G1731 Trochodendron aralioides HOM05D008070 ORTHO05D001888 5.2e-10 68.6 169 32.0
AT1G10770 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 6.8e-10 68.2 154 29.2
BcaC05g24955 Brassica carinata HOM05D009121 ORTHO05D001888 8.9e-10 67.8 154 29.9
Sp3g05640 Schrenkiella parvula HOM05D005742 ORTHO05D001888 1.2e-09 67.4 136 30.1
Aa31LG5G17240 Aethionema arabicum HOM05D005742 ORTHO05D001888 1.5e-09 67.0 136 31.6
MELO3C011973.2 Cucumis melo HOM05D008070 ORTHO05D001888 2.6e-09 66.2 138 31.9
Carub.0001s1032 Capsella rubella HOM05D009121 ORTHO05D001888 3.4e-09 65.9 153 30.1
Carub.0003s0617 Capsella rubella HOM05D005742 ORTHO05D001888 3.4e-09 65.9 154 30.5
AL1G21700 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 9.8e-09 64.3 154 27.9
BolC5t29657H Brassica oleracea HOM05D009121 ORTHO05D001888 1.3e-08 63.9 154 30.5
Sed0000802 Sechium edule HOM05D008070 ORTHO05D001888 1.3e-08 63.9 128 30.5
C05p09130 Brassica napus HOM05D009121 ORTHO05D001888 1.7e-08 63.5 154 30.5
CARHR081260 Cardamine hirsuta HOM05D005742 ORTHO05D001888 1.7e-08 63.5 136 30.1
CiPaw.02G075500 Carya illinoinensis HOM05D005742 ORTHO05D001888 2.9e-08 62.8 139 30.2
Sed0009222 Sechium edule HOM05D005742 ORTHO05D001888 2.9e-08 62.8 159 30.2
CDE02G2547 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 4.9e-08 62.0 166 27.1
CsaV3_4G001290 Cucumis sativus L. HOM05D005742 ORTHO05D001888 4.9e-08 62.0 157 31.2
AL2G15820 Arabidopsis lyrata HOM05D009121 ORTHO05D001888 1.1e-07 60.8 158 27.8
Thhalv10024081m.g Eutrema salsugineum HOM05D009121 ORTHO05D001888 1.4e-07 60.5 153 30.1
A06p07570 Brassica napus HOM05D009121 ORTHO05D001888 1.9e-07 60.1 154 29.9
BraA06t23959Z Brassica rapa HOM05D009121 ORTHO05D001888 1.9e-07 60.1 154 29.9
ClCG10G011490 Citrullus lanatus HOM05D005742 ORTHO05D001888 1.9e-07 60.1 155 28.4
QL04p082804 Quercus lobata HOM05D010056 ORTHO05D001888 2.4e-07 59.7 121 32.2
Rhsim02G0004500 Rhododendron simsii HOM05D005742 ORTHO05D001888 2.4e-07 59.7 163 28.8
CARHR051730 Cardamine hirsuta HOM05D009121 ORTHO05D001888 3.2e-07 59.3 156 26.9
Cpa.g.sc9.68 Carica papaya HOM05D005742 ORTHO05D001888 3.2e-07 59.3 139 30.9
Hma1.2p1_0013F.1_g008650 Hydrangea macrophylla HOM05D005742 ORTHO05D001888 3.2e-07 59.3 166 30.1
QL06p011856 Quercus lobata HOM05D005742 ORTHO05D001888 3.2e-07 59.3 155 31.0
Carub.0002s0459 Capsella rubella HOM05D009121 ORTHO05D001888 4.1e-07 58.9 158 27.8
LjContig00081g0023529 Lotus japonicus HOM05D005742 ORTHO05D001888 4.1e-07 58.9 142 25.4
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 5.4e-07 58.5 155 27.7
PSO478G3987 Papaver somniferum HOM05D020914 ORTHO05D001888 5.4e-07 58.5 166 25.9
Ah.04g157100 Amaranthus hybridus HOM05D005742 ORTHO05D001888 9.2e-07 57.8 142 28.2
CSS0018184 Camellia sinensis var. sinensis HOM05D005742 ORTHO05D001888 9.2e-07 57.8 151 29.8
CSS0026509 Camellia sinensis var. sinensis HOM05D005742 ORTHO05D001888 9.2e-07 57.8 151 29.8
MELO3C017910.2 Cucumis melo HOM05D005742 ORTHO05D001888 9.2e-07 57.8 157 28.0
BcaC07g38589 Brassica carinata HOM05D009121 ORTHO05D001888 1.2e-06 57.4 153 28.8
Duzib248G0935 Durio zibethinus HOM05D008070 ORTHO05D001888 1.6e-06 57.0 170 32.4
MBI19_g03227_MAGBIO Magnolia biondii HOM05D005742 ORTHO05D001888 1.6e-06 57.0 157 28.7
PSO017G3787 Papaver somniferum HOM05D020914 ORTHO05D023578 1.6e-06 57.0 166 25.3
Rhsim04G0235100 Rhododendron simsii HOM05D005742 ORTHO05D001888 2.1e-06 56.6 137 29.2
CDE06G2294 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 2.7e-06 56.2 145 29.7
Dinv44293 Davidia involucrata HOM05D005742 ORTHO05D001888 3.5e-06 55.8 161 27.3
Carub.0003s0619 Capsella rubella HOM05D005742 ORTHO05D001888 4.6e-06 55.5 147 32.7
Haze_01291 Corylus avellana HOM05D005742 ORTHO05D001888 4.6e-06 55.5 138 32.6
AT1G60760 Arabidopsis thaliana HOM05D009121 ORTHO05D001888 6.0e-06 55.1 158 27.2
CDE07G0112 Ceratophyllum demersum HOM05D005742 ORTHO05D001888 7.8e-06 54.7 140 30.0
Oeu012697.1 Olea europaea HOM05D009745 ORTHO05D011350 7.8e-06 54.7 164 28.7
TAR362G0759 Trochodendron aralioides HOM05D005742 ORTHO05D001888 7.8e-06 54.7 142 28.9


User provided reference genes

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