Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 0.0e+00 1625.9 867 100.0
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 0.0e+00 1276.5 887 80.0
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 0.0e+00 1273.8 887 79.0
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 0.0e+00 1266.9 885 79.4
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 0.0e+00 1261.5 879 79.0
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 0.0e+00 1252.3 880 78.4
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 0.0e+00 1243.4 885 77.9
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 0.0e+00 1234.9 880 78.1
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 0.0e+00 1216.1 887 76.1
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 0.0e+00 1204.5 886 75.4
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 0.0e+00 1203.7 889 75.7
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 0.0e+00 1202.6 887 75.5
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 0.0e+00 1201.8 887 75.6
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 2.5e-300 1035.4 874 66.2
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 8.3e-256 887.5 800 62.4
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 9.2e-255 884.0 777 62.2
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 3.0e-253 879.0 798 61.5
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 1.5e-252 876.7 812 60.1
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 3.6e-251 872.1 779 61.4
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 4.0e-250 868.6 818 59.8
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 5.2e-250 868.2 820 59.1
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 1.2e-249 867.1 841 58.5
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 4.4e-249 865.1 854 58.5
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 7.5e-249 864.4 856 58.4
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 1.3e-248 863.6 814 60.2
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 4.1e-247 858.6 825 59.0
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 4.1e-247 858.6 814 59.8
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 2.1e-246 856.3 804 59.3
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 6.0e-246 854.7 819 59.6
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 2.8e-243 845.9 782 59.3
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.6e-243 845.5 795 59.4
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 3.6e-243 845.5 783 60.2
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 8.1e-243 844.3 820 58.3
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 1.4e-242 843.6 798 59.4
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 4.0e-242 842.0 762 60.2
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.4e-241 839.0 844 57.6
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 4.9e-240 835.1 797 57.3
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 3.5e-238 828.9 840 57.3
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 2.3e-237 826.2 814 56.5
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 2.1e-235 819.7 844 55.2
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 5.2e-234 815.1 802 57.7
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 8.9e-234 814.3 802 56.9
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.2e-233 813.9 769 58.3
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 8.4e-232 807.7 769 58.4
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 2.4e-231 806.2 784 57.8
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.2e-230 803.9 838 55.8
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 3.9e-229 798.9 834 55.4
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 6.6e-229 798.1 814 56.1
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 2.5e-228 796.2 811 56.8
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 4.3e-228 795.4 811 56.7
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 1.6e-227 793.5 804 55.3
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 2.0e-225 786.6 726 60.9
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.9e-223 780.0 778 57.1
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 5.4e-223 778.5 779 55.8
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 7.1e-223 778.1 807 55.4
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 4.6e-222 775.4 820 54.3
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 4.8e-219 765.4 816 54.7
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 5.3e-218 761.9 815 53.3
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 5.8e-217 758.4 768 57.2
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 8.4e-216 754.6 784 53.8
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 8.4e-216 754.6 813 53.3
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.2e-214 750.7 798 54.3
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 1.5e-212 743.8 827 51.4
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.5e-212 743.8 798 54.3
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.8e-211 739.6 794 52.5
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 3.7e-211 739.2 840 53.2
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 1.8e-210 736.9 837 52.0
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 9.0e-210 734.6 818 52.7
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 2.0e-209 733.4 794 53.4
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 7.1e-207 724.9 764 54.5
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 2.7e-206 723.0 775 53.5
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 6.0e-206 721.8 844 50.9
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 2.3e-205 719.9 816 52.2
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 6.7e-205 718.4 813 51.5
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 3.3e-204 716.1 828 50.5
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 9.6e-204 714.5 815 51.8
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 1.1e-199 701.0 813 51.3
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.0e-197 694.5 794 52.1
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 1.8e-197 693.7 673 59.6
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 5.1e-197 692.2 771 53.7
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 2.0e-188 663.7 798 49.5
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 2.8e-187 659.8 707 53.0
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 3.8e-184 649.4 724 52.2
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 1.5e-177 627.5 801 45.6
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.8e-171 606.7 851 44.9
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 4.8e-171 605.9 783 46.4
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 2.9e-168 596.7 542 60.5
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.2e-164 584.7 467 66.2
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.5e-159 567.8 487 63.4
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 2.0e-156 557.4 593 54.5
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 2.8e-155 553.5 784 45.8
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.3e-149 533.9 806 42.9
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 9.2e-146 521.9 713 46.3
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 1.0e-144 518.5 590 51.0
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 8.0e-142 508.8 604 51.0
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 4.0e-141 506.5 510 54.7
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 4.4e-140 503.1 634 48.7
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 2.1e-134 484.2 597 49.9
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.5e-132 478.0 477 56.4
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 6.4e-131 472.6 507 54.0
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 5.2e-117 426.4 865 37.7
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 8.1e-102 375.9 789 33.1
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 3.4e-84 317.4 799 31.9
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 2.2e-83 314.7 399 43.9
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 3.3e-79 300.8 280 58.6
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.9e-74 285.0 241 63.1
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 3.3e-71 274.2 284 55.6
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 1.2e-65 255.8 624 32.1
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.0e-64 252.7 193 64.2
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 2.0e-60 238.4 202 60.9
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.9e-58 231.9 242 55.8
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 6.3e-54 216.9 229 53.7
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 9.1e-53 213.0 915 25.2
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 6.8e-16 90.5 145 41.4
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 2.1e-12 79.0 68 55.9
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 6.0e-12 77.4 155 36.1
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 1.6e-09 69.3 91 46.2
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 2.8e-09 68.6 91 46.2
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 8.1e-09 67.0 115 36.5


User provided reference genes

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