Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G6970 Aethionema arabicum HOM05D007426 ORTHO05D009167 3.0e-121 440.3 235 100.0
THA.LOC104821759 Tarenaya hassleriana HOM05D007426 ORTHO05D009167 1.7e-68 265.0 215 64.7
CARHR023340 Cardamine hirsuta HOM05D007426 ORTHO05D009167 1.2e-66 258.8 224 67.4
AT1G22960 Arabidopsis thaliana HOM05D007426 ORTHO05D009167 6.8e-65 253.1 220 67.3
Carub.0001s2246 Capsella rubella HOM05D007426 ORTHO05D009167 1.2e-64 252.3 222 65.8
AL1G36520 Arabidopsis lyrata HOM05D007426 ORTHO05D009167 1.5e-64 251.9 217 66.8
Thhalv10006897m.g Eutrema salsugineum HOM05D007426 ORTHO05D009167 7.5e-64 249.6 220 65.9
Sp1g20420 Schrenkiella parvula HOM05D007426 ORTHO05D009167 1.2e-58 232.3 216 61.6
Cpa.g.sc65.89 Carica papaya HOM05D007426 ORTHO05D009167 1.5e-51 208.8 215 51.2
C05p22170 Brassica napus HOM05D007426 ORTHO05D009167 4.2e-51 207.2 218 55.0
BraA09t39664Z Brassica rapa HOM05D007426 ORTHO05D009167 7.2e-51 206.5 210 56.7
BcaC05g26208 Brassica carinata HOM05D007426 ORTHO05D009167 9.5e-51 206.1 218 55.0
BolC5t30917H Brassica oleracea HOM05D007426 ORTHO05D009167 9.5e-51 206.1 220 56.4
Manes.06G063200 Manihot esculenta HOM05D007426 ORTHO05D009167 9.5e-51 206.1 214 48.6
BcaB07g32294 Brassica carinata HOM05D007426 ORTHO05D009167 6.8e-49 199.9 222 55.4
A01p19900 Brassica napus HOM05D007426 ORTHO05D009167 3.4e-48 197.6 207 56.0
A09p41750 Brassica napus HOM05D007426 ORTHO05D009167 3.4e-48 197.6 205 55.6
QL01p003061 Quercus lobata HOM05D007426 ORTHO05D009167 3.4e-48 197.6 221 47.5
TAR629G2850 Trochodendron aralioides HOM05D007426 ORTHO05D009167 9.8e-48 196.1 215 49.3
MD13G1032800 Malus domestica HOM05D007426 ORTHO05D009167 2.7e-45 188.0 221 48.0
CiPaw.05G245100 Carya illinoinensis HOM05D007426 ORTHO05D009167 1.0e-44 186.0 215 47.4
Dinv04907 Davidia involucrata HOM05D007426 ORTHO05D009167 1.0e-44 186.0 172 52.3
MELO3C012287.2 Cucumis melo HOM05D007426 ORTHO05D009167 1.3e-44 185.7 220 45.5
ClCG04G001050 Citrullus lanatus HOM05D007426 ORTHO05D009167 3.9e-44 184.1 223 45.7
MD16G1034800 Malus domestica HOM05D007426 ORTHO05D009167 6.6e-44 183.3 221 45.2
Ciclev10017504m.g Citrus clementina HOM05D007426 ORTHO05D009167 8.6e-44 183.0 220 46.8
GSVIVG01011807001 Vitis vinifera HOM05D000798 ORTHO05D000659 1.9e-43 181.8 211 45.5
RcHm_v2.0_Chr4g0434041 Rosa chinensis HOM05D007426 ORTHO05D009167 3.3e-43 181.0 214 47.7
COL.COLO4_35570 Corchorus olitorius HOM05D002230 ORTHO05D002441 1.6e-42 178.7 182 46.7
Haze_00680 Corylus avellana HOM05D007426 ORTHO05D009167 1.6e-42 178.7 210 46.7
Duzib248G0356 Durio zibethinus HOM05D007426 ORTHO05D009167 2.1e-42 178.3 212 46.2
Aqoxy3G03989 Aquilegia oxysepala HOM05D007426 ORTHO05D009167 3.1e-41 174.5 215 43.3
CSS0006507 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 4.0e-41 174.1 227 44.5
Sed0007337 Sechium edule HOM05D007426 ORTHO05D009167 4.0e-41 174.1 212 44.8
CsaV3_5G034750 Cucumis sativus L. HOM05D007426 ORTHO05D009167 5.2e-41 173.7 224 43.3
Lj3A877T95 Lonicera japonica HOM05D007426 ORTHO05D009167 1.7e-39 168.7 235 41.3
Nn3g17999 Nelumbo nucifera HOM05D007426 ORTHO05D009167 2.9e-39 167.9 217 41.5
Eucgr.G00774 Eucalyptus grandis HOM05D007426 ORTHO05D009167 4.9e-39 167.2 220 43.2
PGR119G0474 Punica granatum HOM05D007426 ORTHO05D009167 4.9e-39 167.2 213 46.0
Atru.chr11.331 Acer truncatum HOM05D007426 ORTHO05D009167 1.4e-38 165.6 182 44.0
SalBow8G0581 Salvia bowleyana HOM05D007426 ORTHO05D009167 2.4e-38 164.9 144 53.5
Gohir.D02G172600 Gossypium hirsutum HOM05D007426 ORTHO05D009167 4.1e-38 164.1 226 42.9
Gohir.A03G149700 Gossypium hirsutum HOM05D007426 ORTHO05D009167 9.2e-38 162.9 226 44.2
Gorai.005G194300 Gossypium raimondii HOM05D007426 ORTHO05D009167 9.2e-38 162.9 225 43.6
Sc11g0003960 Simmondsia chinensis HOM05D007426 ORTHO05D009167 9.2e-38 162.9 197 41.6
TWI79G0655 Tripterygium wilfordii HOM05D007426 ORTHO05D009167 1.6e-37 162.2 203 43.8
CANSAT01G1275 Cannabis sativa HOM05D007426 ORTHO05D009167 6.0e-37 160.2 194 45.9
FAN12G1804 Fragaria x ananassa HOM05D007426 ORTHO05D009167 7.8e-37 159.8 214 43.0
Hma1.2p1_0882F.1_g232200 Hydrangea macrophylla HOM05D007426 ORTHO05D009167 7.8e-37 159.8 218 43.1
MSTRG.13563 Avicennia marina HOM05D007426 ORTHO05D009167 1.3e-36 159.1 144 49.3
FAN12G0928 Fragaria x ananassa HOM05D007426 ORTHO05D009167 1.3e-36 159.1 215 42.8
DCAR_023623 Daucus carota HOM05D007426 ORTHO05D009167 3.9e-36 157.5 138 52.2
Cc11_g09290 Coffea canephora HOM05D007426 ORTHO05D009167 6.6e-36 156.8 171 45.0
Ca_12586_v3 Cicer arietinum L. HOM05D007426 ORTHO05D009167 5.6e-35 153.7 220 42.3
CDE04G0172 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 7.3e-35 153.3 144 52.1
Lalb_Chr10g0096341 Lupinus albus HOM05D007426 ORTHO05D009167 2.8e-34 151.4 223 41.7
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 1.4e-33 149.1 139 52.5
SGA_v2.0_scaffold376G50296 Striga asiatica HOM05D007426 ORTHO05D009167 6.8e-33 146.7 146 48.6
Psat6g044600 Pisum sativum HOM05D007426 ORTHO05D009167 2.6e-32 144.8 167 43.1
Glyma.14G156100 Glycine max HOM05D007426 ORTHO05D009167 5.8e-32 143.7 140 48.6
Nitab4.5_0000350g0090 Nicotiana tabacum HOM05D007426 ORTHO05D009167 7.5e-32 143.3 170 41.2
Glyma.13G034900 Glycine max HOM05D007426 ORTHO05D009167 1.3e-31 142.5 140 48.6
Sopen05g004400 Solanum pennellii HOM05D007426 ORTHO05D009167 1.3e-31 142.5 144 45.1
arahy.Tifrunner.gnm1.ann1.5H8JFW Arachis hypogaea HOM05D003289 ORTHO05D009167 1.7e-31 142.1 149 50.3
Rhsim09G0137400 Rhododendron simsii HOM05D007426 ORTHO05D009167 1.7e-31 142.1 227 39.2
Solyc05g008560.1 Solanum lycopersicum HOM05D007426 ORTHO05D009167 2.2e-31 141.7 144 44.4
PGSC0003DMG402030517 Solanum tuberosum HOM05D007426 ORTHO05D009167 2.2e-31 141.7 144 45.1
arahy.Tifrunner.gnm1.ann1.A3A4LS Arachis hypogaea HOM05D007426 ORTHO05D009167 2.9e-31 141.4 149 50.3
Nitab4.5_0003886g0020 Nicotiana tabacum HOM05D007426 ORTHO05D009167 3.7e-31 141.0 170 40.0
vmacro10360 Vaccinium macrocarpon HOM05D007426 ORTHO05D009167 6.4e-31 140.2 223 39.5
Phvul.003G029100 Phaseolus vulgaris HOM05D007426 ORTHO05D009167 1.4e-30 139.0 139 50.4
Lsat_1_v5_gn_4_15701 Lactuca sativa HOM05D007426 ORTHO05D009167 1.9e-30 138.7 145 46.2
Medtr1g031720 Medicago truncatula HOM05D007426 ORTHO05D009167 5.4e-30 137.1 146 43.8
HPP92_023011 Vanilla planifolia HOM05D007426 ORTHO05D009167 9.2e-30 136.3 139 47.5
VMungo1215G1392 Vigna mungo HOM05D007426 ORTHO05D009167 6.0e-29 133.7 142 48.6
Lj2g0001206 Lotus japonicus HOM05D007426 ORTHO05D009167 7.8e-29 133.3 201 41.3
Actinidia34749 Actinidia chinensis HOM05D007426 ORTHO05D009167 1.0e-28 132.9 215 38.1
BcaB03g11918 Brassica carinata HOM05D007426 ORTHO05D009167 5.1e-28 130.6 212 42.0
CAN.G1489.16 Capsicum annuum HOM05D007426 ORTHO05D009167 6.6e-28 130.2 139 48.2
ECA234G2171 Erigeron canadensis HOM05D007426 ORTHO05D009167 8.1e-26 123.2 146 39.0
ATR0579G149 Amborella trichopoda HOM05D007426 ORTHO05D009167 1.9e-22 112.1 139 39.6
CSS0028756 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 3.2e-22 111.3 85 56.5
Oeu048376.1 Olea europaea HOM05D007426 ORTHO05D009167 9.2e-22 109.8 162 38.9
Cfa015816 Carpinus fangiana HOM05D007426 ORTHO05D009167 2.1e-21 108.6 75 61.3
Migut.E00390 Erythranthe guttata HOM05D007426 ORTHO05D009167 2.7e-21 108.2 214 31.3
TPR.G36966 Trifolium pratense HOM05D007426 ORTHO05D009167 1.8e-17 95.5 139 41.0
FvH4_4g26410 Fragaria vesca HOM05D007426 ORTHO05D009167 1.2e-16 92.8 95 46.3
CDE07G1153 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 4.2e-14 84.3 71 54.9
FAN17G2923 Fragaria x ananassa HOM05D007426 ORTHO05D009167 7.8e-13 80.1 86 44.2
SEGI_36761 Sequoiadendron giganteum HOM05D007426 ORTHO05D009167 6.6e-12 77.0 133 33.1
FAN07G1506 Fragaria x ananassa HOM05D007426 ORTHO05D009167 2.0e-08 65.5 66 45.5
EL10Ac6g15406 Beta vulgaris HOM05D007496 ORTHO05D009479 2.2e-07 62.0 144 27.8
SEGI_39034 Sequoiadendron giganteum HOM05D007675 ORTHO05D009699 2.9e-07 61.6 137 25.5
FAN12G1126 Fragaria x ananassa HOM05D007426 ORTHO05D009167 3.8e-07 61.2 38 63.2
Lalb_Chr02g0145411 Lupinus albus HOM05D000424 ORTHO05D000355 8.4e-07 60.1 153 28.1
Lalb_Chr02g0145461 Lupinus albus HOM05D000424 ORTHO05D000355 8.4e-07 60.1 153 28.1
GSVIVG01009638001 Vitis vinifera HOM05D007639 ORTHO05D009509 8.4e-07 60.1 133 27.8
MBI16_g36318_MAGBIO Magnolia biondii HOM05D002460 ORTHO05D002716 1.4e-06 59.3 133 25.6
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 1.9e-06 58.9 156 29.5
Glyma.10G264500 Glycine max HOM05D000424 ORTHO05D000355 1.9e-06 58.9 134 29.1
ATR0733G078 Amborella trichopoda HOM05D007639 ORTHO05D009509 2.4e-06 58.5 133 27.1
SEGI_21882 Sequoiadendron giganteum HOM05D007750 ORTHO05D009431 2.4e-06 58.5 131 25.2
Ciclev10003562m.g Citrus clementina HOM05D007639 ORTHO05D009509 3.2e-06 58.2 137 29.2
CsaV3_1G001090 Cucumis sativus L. HOM05D002460 ORTHO05D002716 3.2e-06 58.2 156 24.4
arahy.Tifrunner.gnm1.ann1.TA9010 Arachis hypogaea HOM05D000424 ORTHO05D000355 4.2e-06 57.8 134 28.4
TAR626G0036 Trochodendron aralioides HOM05D007390 ORTHO05D009114 5.4e-06 57.4 114 31.6
ATR0824G150 Amborella trichopoda HOM05D002460 ORTHO05D002716 7.1e-06 57.0 192 25.0
CiPaw.15G071600 Carya illinoinensis HOM05D007639 ORTHO05D009509 7.1e-06 57.0 137 27.0
TPR.G30149 Trifolium pratense HOM05D000424 ORTHO05D000355 7.1e-06 57.0 163 27.0
Aqoxy3G01152 Aquilegia oxysepala HOM05D007358 ORTHO05D009117 9.3e-06 56.6 165 29.7
ECA247G0350 Erigeron canadensis HOM05D002460 ORTHO05D002716 9.3e-06 56.6 134 26.1
SEGI_12665 Sequoiadendron giganteum HOM05D007455 ORTHO05D009431 9.3e-06 56.6 131 26.7
VMungo1215G0531 Vigna mungo HOM05D002460 ORTHO05D002716 9.3e-06 56.6 138 27.5


User provided reference genes

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