Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G650 Aethionema arabicum HOM05D006171 ORTHO05D007294 5.4e-173 610.9 313 100.0
Carub.0001s1588 Capsella rubella HOM05D006171 ORTHO05D007294 6.2e-153 544.3 313 86.9
AT1G16080 Arabidopsis thaliana HOM05D006171 ORTHO05D007294 1.8e-152 542.7 314 87.3
Sp1g14390 Schrenkiella parvula HOM05D006171 ORTHO05D007294 4.0e-152 541.6 313 86.9
AL1G28240 Arabidopsis lyrata HOM05D006171 ORTHO05D007294 5.8e-151 537.7 314 86.6
Thhalv10008259m.g Eutrema salsugineum HOM05D006171 ORTHO05D007294 2.2e-150 535.8 313 86.9
THA.LOC104812426 Tarenaya hassleriana HOM05D006171 ORTHO05D007294 4.3e-146 521.5 313 83.4
A06p12100 Brassica napus HOM05D006171 ORTHO05D007294 1.4e-144 516.5 313 84.7
BraA06t24379Z Brassica rapa HOM05D006171 ORTHO05D007294 3.4e-143 511.9 313 83.7
BcaB02g06590 Brassica carinata HOM05D006171 ORTHO05D007294 1.0e-142 510.4 313 83.4
BcaC05g25605 Brassica carinata HOM05D006171 ORTHO05D007294 4.9e-142 508.1 313 82.7
BolC5t30159H Brassica oleracea HOM05D006171 ORTHO05D007294 6.5e-142 507.7 313 82.7
A09p61030 Brassica napus HOM05D000031 ORTHO05D007294 2.5e-141 505.8 313 82.4
C05p14280 Brassica napus HOM05D006171 ORTHO05D007294 9.3e-141 503.8 313 82.7
BraA09t41476Z Brassica rapa HOM05D000031 ORTHO05D007294 9.3e-141 503.8 314 82.5
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 3.5e-140 501.9 312 82.1
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 3.5e-140 501.9 312 82.1
BcaB03g14506 Brassica carinata HOM05D000031 ORTHO05D007294 6.9e-136 487.6 315 81.0
Cpa.g.sc95.67 Carica papaya HOM05D006171 ORTHO05D007294 1.8e-128 463.0 309 76.7
Manes.11G069800 Manihot esculenta HOM05D006171 ORTHO05D007294 2.6e-127 459.1 314 73.9
Nitab4.5_0002700g0080 Nicotiana tabacum HOM05D006171 ORTHO05D007294 5.9e-127 458.0 288 77.4
CiPaw.01G256900 Carya illinoinensis HOM05D006171 ORTHO05D007294 1.0e-126 457.2 302 76.5
Cfa001846 Carpinus fangiana HOM05D006171 ORTHO05D007294 3.8e-126 455.3 305 75.1
Potri.003G185754 Populus trichocarpa HOM05D006171 ORTHO05D007294 3.8e-126 455.3 281 79.0
Potri.001G040100 Populus trichocarpa HOM05D006171 ORTHO05D007294 6.5e-126 454.5 282 78.7
PGR102G1595 Punica granatum HOM05D006171 ORTHO05D007294 6.5e-126 454.5 312 74.0
Solyc03g117740.3 Solanum lycopersicum HOM05D006171 ORTHO05D007294 2.5e-125 452.6 284 77.1
Ah.09g231760 Amaranthus hybridus HOM05D006171 ORTHO05D007294 3.2e-125 452.2 279 78.5
Eucgr.F03988 Eucalyptus grandis HOM05D006171 ORTHO05D007294 3.2e-125 452.2 276 80.1
Sopen03g036650 Solanum pennellii HOM05D006171 ORTHO05D007294 5.5e-125 451.4 284 77.1
Ciclev10025944m.g Citrus clementina HOM05D006171 ORTHO05D007294 7.2e-125 451.1 272 80.5
Potri.003G185501 Populus trichocarpa HOM05D006171 ORTHO05D007294 9.4e-125 450.7 310 73.2
Thecc.06G048100 Theobroma cacao HOM05D006171 ORTHO05D007294 9.4e-125 450.7 311 72.0
Peaxi162Scf00314g01040 Petunia axillaris HOM05D006171 ORTHO05D007294 1.2e-124 450.3 280 76.4
Potri.003G185901 Populus trichocarpa HOM05D006171 ORTHO05D007294 2.1e-124 449.5 265 80.8
PGSC0003DMG400014158 Solanum tuberosum HOM05D006171 ORTHO05D007294 2.1e-124 449.5 284 76.4
Aqoxy7G02339 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 6.1e-124 448.0 268 78.4
Nitab4.5_0004738g0050 Nicotiana tabacum HOM05D006171 ORTHO05D007294 1.0e-123 447.2 280 77.5
TWI12G1342 Tripterygium wilfordii HOM05D006171 ORTHO05D007294 1.0e-123 447.2 269 79.9
FAN09G0753 Fragaria x ananassa HOM05D006171 ORTHO05D007294 1.4e-123 446.8 272 80.5
Duzib235G0222 Durio zibethinus HOM05D006171 ORTHO05D007294 1.8e-123 446.4 317 72.9
Gohir.D05G117900 Gossypium hirsutum HOM05D006171 ORTHO05D007294 2.3e-123 446.0 255 81.6
Prupe.3G104600 Prunus persica HOM05D006171 ORTHO05D007294 2.3e-123 446.0 263 81.4
CAN.G1008.12 Capsicum annuum HOM05D006171 ORTHO05D007294 3.0e-123 445.7 282 77.0
Glyma.08G220900 Glycine max HOM05D006171 ORTHO05D007294 3.9e-123 445.3 289 73.7
SalBow1G2136 Salvia bowleyana HOM05D006171 ORTHO05D007294 3.9e-123 445.3 310 71.3
Atru.chr1.2816 Acer truncatum HOM05D006171 ORTHO05D007294 5.1e-123 444.9 272 79.4
Glyma.07G020900 Glycine max HOM05D006171 ORTHO05D007294 8.8e-123 444.1 300 73.3
Medtr4g007910 Medicago truncatula HOM05D006171 ORTHO05D007294 8.8e-123 444.1 272 77.9
FvH4_6g28180 Fragaria vesca HOM05D006171 ORTHO05D007294 1.1e-122 443.7 300 73.7
Sabra03G0135700 Salix brachista HOM05D006171 ORTHO05D007294 1.1e-122 443.7 321 71.7
Nn2g12468 Nelumbo nucifera HOM05D006171 ORTHO05D007294 1.5e-122 443.4 275 77.8
FAN14G3270 Fragaria x ananassa HOM05D006171 ORTHO05D007294 2.6e-122 442.6 300 73.3
Lj5C82T4 Lonicera japonica HOM05D006171 ORTHO05D007294 4.4e-122 441.8 270 78.9
Hund22405 Selenicereus undatus HOM05D006171 ORTHO05D007294 4.4e-122 441.8 323 72.1
Lj3g0005429 Lotus japonicus HOM05D006171 ORTHO05D007294 5.7e-122 441.4 278 78.8
COL.COLO4_26789 Corchorus olitorius HOM05D006171 ORTHO05D007294 7.4e-122 441.0 254 81.9
Sc10g0006500 Simmondsia chinensis HOM05D006171 ORTHO05D007294 2.2e-121 439.5 279 77.1
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea HOM05D006171 ORTHO05D007294 2.8e-121 439.1 306 72.2
CsaV3_7G031750 Cucumis sativus L. HOM05D006171 ORTHO05D007294 2.8e-121 439.1 278 77.3
TAR626G1848 Trochodendron aralioides HOM05D006171 ORTHO05D007294 2.8e-121 439.1 281 75.8
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea HOM05D006171 ORTHO05D007294 3.7e-121 438.7 306 72.2
CSS0034221 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 4.8e-121 438.3 279 77.1
RcHm_v2.0_Chr2g0132161 Rosa chinensis HOM05D006171 ORTHO05D007294 6.3e-121 438.0 262 80.2
VMungo1309G0227 Vigna mungo HOM05D006171 ORTHO05D007294 8.2e-121 437.6 284 73.6
Phvul.009G155700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 1.1e-120 437.2 284 72.9
Lalb_Chr25g0278721 Lupinus albus HOM05D006171 ORTHO05D007294 1.4e-120 436.8 284 75.7
VMungo0647G1588 Vigna mungo HOM05D006171 ORTHO05D007294 1.4e-120 436.8 290 73.4
AUR62002650 Chenopodium quinoa HOM05D006171 ORTHO05D007294 1.8e-120 436.4 262 77.5
unitig_62.g23820 Utricularia gibba HOM05D006171 ORTHO05D007294 1.8e-120 436.4 307 72.6
MELO3C023482.2 Cucumis melo HOM05D006171 ORTHO05D007294 2.4e-120 436.0 307 72.6
Lsat_1_v5_gn_4_84921 Lactuca sativa HOM05D006171 ORTHO05D007294 2.4e-120 436.0 293 73.0
HanXRQChr16g0499501 Helianthus annuus HOM05D006171 ORTHO05D007294 3.1e-120 435.6 265 79.2
Phvul.008G253700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 3.1e-120 435.6 263 79.1
Actinidia36860 Actinidia chinensis HOM05D006171 ORTHO05D007294 4.1e-120 435.3 268 77.2
ClCG09G003450 Citrullus lanatus HOM05D006171 ORTHO05D007294 5.3e-120 434.9 278 76.3
Rhsim12G0183500 Rhododendron simsii HOM05D006171 ORTHO05D007294 1.5e-119 433.3 255 79.2
MD09G1228700 Malus domestica HOM05D006171 ORTHO05D007294 2.0e-119 433.0 306 71.9
Migut.D01148 Erythranthe guttata HOM05D006171 ORTHO05D007294 2.6e-119 432.6 310 70.3
ECA232G3902 Erigeron canadensis HOM05D006171 ORTHO05D007294 4.5e-119 431.8 267 76.4
MSTRG.9390 Avicennia marina HOM05D006171 ORTHO05D007294 1.0e-118 430.6 280 73.9
Potri.001G041140 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.3e-118 430.3 282 76.2
Psat7g260440 Pisum sativum HOM05D006171 ORTHO05D007294 1.7e-118 429.9 271 74.9
CDE07G0158 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 3.8e-118 428.7 270 74.1
HPP92_021945 Vanilla planifolia HOM05D006171 ORTHO05D007294 1.4e-117 426.8 283 74.6
GSVIVG01016093001 Vitis vinifera HOM05D006171 ORTHO05D007294 3.2e-117 425.6 243 81.5
SGA_v2.0_scaffold74G24604 Striga asiatica HOM05D006171 ORTHO05D007294 9.4e-117 424.1 254 78.3
vmacro16838 Vaccinium macrocarpon HOM05D006171 ORTHO05D007294 1.8e-115 419.9 251 78.5
AUR62034059 Chenopodium quinoa HOM05D006171 ORTHO05D007294 5.2e-115 418.3 306 66.7
Oeu003115.1 Olea europaea HOM05D006171 ORTHO05D007294 2.0e-114 416.4 243 78.6
Oeu003116.1 Olea europaea HOM05D006171 ORTHO05D007294 2.0e-114 416.4 243 78.6
Cc04_g05360 Coffea canephora HOM05D006171 ORTHO05D007294 4.4e-114 415.2 243 79.4
Zm00001eb177930 Zea mays HOM05D006171 ORTHO05D007294 9.1e-112 407.5 312 68.6
CSS0033272 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 2.9e-110 402.5 279 71.7
MBI14_g16440_MAGBIO Magnolia biondii HOM05D006171 ORTHO05D007294 6.5e-110 401.4 252 75.8
CBR_g3722 Chara braunii HOM05D006171 ORTHO05D007294 8.2e-105 384.4 278 67.6
Pp3c1_40240 Physcomitrium patens HOM05D006171 ORTHO05D007294 1.8e-104 383.3 271 69.0
EL10Ac8g19420 Beta vulgaris HOM05D006171 ORTHO05D007294 3.1e-104 382.5 271 70.1
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 9.4e-101 370.9 273 65.9
SMO356G0223 Selaginella moellendorffii HOM05D006171 ORTHO05D007294 2.1e-100 369.8 259 67.2
Gorai.009G121800 Gossypium raimondii HOM05D006171 ORTHO05D007294 3.6e-100 369.0 219 80.8
Mapoly0047s0137 Marchantia polymorpha HOM05D006171 ORTHO05D007294 8.0e-100 367.9 314 58.9
Os08g0266300 Oryza sativa ssp. japonica HOM05D006171 ORTHO05D007294 1.6e-92 343.6 284 66.9
FAN05G3051 Fragaria x ananassa HOM05D006171 ORTHO05D007294 1.5e-90 337.0 275 65.8
PSO017G5952 Papaver somniferum HOM05D006171 ORTHO05D007294 7.5e-90 334.7 192 81.2
CANSAT64G1829 Cannabis sativa HOM05D006171 ORTHO05D007294 1.7e-89 333.6 192 83.3
Dinv21434 Davidia involucrata HOM05D006171 ORTHO05D007294 2.2e-89 333.2 198 81.3
PSO170G6342 Papaver somniferum HOM05D006171 ORTHO05D007294 1.4e-88 330.5 192 79.7
HanXRQChr16g0499491 Helianthus annuus HOM05D006171 ORTHO05D007294 3.5e-87 325.9 312 54.5
MD17G1227100 Malus domestica HOM05D006171 ORTHO05D007294 1.7e-86 323.6 190 81.6
ATR0580G215 Amborella trichopoda HOM05D006171 ORTHO05D007294 6.6e-86 321.6 190 80.0
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis HOM05D006171 ORTHO05D007294 2.5e-85 319.7 224 71.4
MCO15G666 Micromonas commoda HOM05D006171 ORTHO05D007294 2.1e-84 316.6 266 58.6
Cre10.g435850 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 2.3e-83 313.2 256 60.9
QL05p037111 Quercus lobata HOM05D006171 ORTHO05D007294 1.5e-82 310.5 187 80.2
Gohir.A05G117000 Gossypium hirsutum HOM05D006171 ORTHO05D007294 3.4e-82 309.3 173 82.7
PRCOL_00006061 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 2.4e-80 303.1 243 57.6
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla HOM05D006171 ORTHO05D007294 2.5e-69 266.5 209 65.1
Aqoxy6G02563 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 2.3e-67 260.0 256 52.7
RcHm_v2.0_Chr2g0132191 Rosa chinensis HOM05D006171 ORTHO05D007294 3.1e-59 233.0 188 63.8
Sed0008158 Sechium edule HOM05D006171 ORTHO05D007294 4.4e-58 229.2 143 77.6
Rhsim12G0183600 Rhododendron simsii HOM05D006171 ORTHO05D007294 1.1e-56 224.6 256 50.8
CDE04G3654 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 4.3e-37 159.5 128 60.9
AagrBONN_evm.TU.Sc2ySwM_344.1199 Anthoceros agrestis HOM05D006171 ORTHO05D007294 6.2e-36 155.6 277 36.8
QL05p037113 Quercus lobata HOM05D006171 ORTHO05D007294 2.7e-31 140.2 85 75.3
Cre03.g167050 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 9.3e-24 115.2 319 29.5
SEGI_00638 Sequoiadendron giganteum HOM05D006171 ORTHO05D007294 1.5e-21 107.8 65 76.9
PRCOL_00003410 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 1.6e-20 104.4 274 32.5
RcHm_v2.0_Chr2g0132221 Rosa chinensis HOM05D006171 ORTHO05D007294 1.1e-19 101.7 69 68.1
CARHR016590 Cardamine hirsuta HOM05D006171 ORTHO05D007294 7.7e-18 95.5 82 75.6
arahy.Tifrunner.gnm1.ann1.VYJR5C Arachis hypogaea HOM05D006171 ORTHO05D007294 2.5e-13 80.5 104 48.1
Nn5g31109 Nelumbo nucifera HOM05D006171 ORTHO05D007294 6.9e-11 72.4 80 55.0


User provided reference genes

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