Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 3.8e-48 194.5 99 100.0
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.7e-40 169.1 98 87.8
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.7e-40 169.1 98 87.8
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 2.3e-40 168.7 93 89.2
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 4.2e-39 164.5 99 84.8
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 9.5e-39 163.3 94 88.3
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 1.2e-38 162.9 101 83.2
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-38 161.8 99 83.8
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 2.8e-38 161.8 99 83.8
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 2.8e-38 161.8 99 83.8
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 6.1e-38 160.6 98 83.7
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 1.4e-37 159.5 98 82.7
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 2.3e-37 158.7 95 85.3
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 6.8e-37 157.1 101 81.2
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 8.8e-37 156.8 99 81.8
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 8.8e-37 156.8 99 81.8
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 8.8e-37 156.8 99 81.8
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 8.8e-37 156.8 99 81.8
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 2.0e-36 155.6 99 80.8
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 4.4e-36 154.5 100 82.0
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 7.5e-36 153.7 99 79.8
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 2.2e-35 152.1 79 92.4
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 2.8e-35 151.8 85 85.9
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 1.1e-34 149.8 93 77.4
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.8e-34 149.1 86 84.9
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.2e-33 146.4 96 75.0
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 1.6e-33 146.0 99 78.8
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 4.5e-33 144.4 94 78.7
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 4.5e-33 144.4 93 76.3
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 5.9e-33 144.1 84 83.3
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 5.9e-33 144.1 91 81.3
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 1.3e-32 142.9 94 73.4
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 1.7e-32 142.5 84 83.3
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 2.3e-32 142.1 94 76.6
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 3.8e-32 141.4 85 82.4
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 3.8e-32 141.4 94 74.5
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 5.0e-32 141.0 84 83.3
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 6.6e-32 140.6 94 71.3
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 8.6e-32 140.2 93 74.2
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 1.1e-31 139.8 98 72.4
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.9e-31 139.0 84 82.1
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 1.9e-31 139.0 94 76.6
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 2.5e-31 138.7 83 83.1
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 2.5e-31 138.7 83 83.1
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 2.5e-31 138.7 89 78.7
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 2.5e-31 138.7 83 79.5
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 3.3e-31 138.3 83 83.1
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 3.3e-31 138.3 84 75.0
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 3.3e-31 138.3 94 71.3
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 3.3e-31 138.3 90 72.2
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 3.3e-31 138.3 94 72.3
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.3e-31 137.9 83 81.9
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 4.3e-31 137.9 83 81.9
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 4.3e-31 137.9 80 83.8
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 5.6e-31 137.5 91 76.9
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 5.6e-31 137.5 81 80.2
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 7.3e-31 137.1 92 76.1
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 9.5e-31 136.7 94 70.2
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 9.5e-31 136.7 94 71.3
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 1.2e-30 136.3 84 81.0
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 1.2e-30 136.3 96 75.0
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 1.2e-30 136.3 87 71.3
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 1.6e-30 136.0 91 76.9
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.1e-30 135.6 99 74.7
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 2.8e-30 135.2 90 77.8
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 2.8e-30 135.2 97 76.3
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 2.8e-30 135.2 83 79.5
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 3.6e-30 134.8 92 75.0
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 4.7e-30 134.4 99 73.7
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 4.7e-30 134.4 94 70.2
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 6.1e-30 134.0 82 79.3
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 6.1e-30 134.0 99 73.7
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 6.1e-30 134.0 76 80.3
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 8.0e-30 133.7 89 77.5
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 8.0e-30 133.7 89 77.5
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 1.0e-29 133.3 82 79.3
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 1.4e-29 132.9 97 68.0
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 1.4e-29 132.9 93 77.4
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 1.8e-29 132.5 82 76.8
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 1.8e-29 132.5 94 73.4
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 2.3e-29 132.1 98 73.5
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 3.0e-29 131.7 94 71.3
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 3.0e-29 131.7 81 72.8
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 3.0e-29 131.7 80 78.8
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 4.0e-29 131.3 87 75.9
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 4.0e-29 131.3 78 78.2
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 4.0e-29 131.3 91 72.5
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 5.2e-29 131.0 85 75.3
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 6.8e-29 130.6 85 75.3
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 6.8e-29 130.6 84 76.2
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 6.8e-29 130.6 74 81.1
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 8.9e-29 130.2 89 76.4
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 8.9e-29 130.2 84 78.6
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 2.6e-28 128.6 77 83.1
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 3.4e-28 128.3 66 93.9
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 3.4e-28 128.3 99 70.7
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 1.7e-27 125.9 97 69.1
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.2e-27 125.6 97 71.1
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 2.9e-27 125.2 99 67.7
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 8.3e-27 123.6 87 71.3
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 1.4e-26 122.9 94 63.8
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 2.4e-26 122.1 113 59.3
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 2.4e-26 122.1 106 63.2
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.4e-26 122.1 70 81.4
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 5.4e-26 120.9 94 69.1
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 4.6e-25 117.9 78 75.6
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 1.0e-24 116.7 77 75.3
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 1.7e-24 115.9 78 73.1
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 2.3e-24 115.5 70 77.1
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 5.0e-24 114.4 68 83.8
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 6.6e-24 114.0 71 76.1
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 8.6e-24 113.6 70 78.6
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 2.5e-23 112.1 87 69.0
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 3.3e-23 111.7 76 77.6
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 4.3e-23 111.3 69 78.3
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.2e-22 109.8 72 70.8
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 2.1e-22 109.0 66 80.3
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 6.2e-22 107.5 82 68.3
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 2.2e-19 99.0 74 66.2
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 5.0e-16 87.8 86 57.0
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 6.6e-16 87.4 94 57.4
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 1.2e-14 83.2 70 55.7
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.8e-14 82.0 47 80.9
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 1.1e-13 80.1 64 56.2
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 1.4e-13 79.7 61 65.6
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-11 72.8 48 75.0
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-11 72.8 48 75.0
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 1.7e-11 72.8 48 75.0
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 4.9e-11 71.2 52 65.4
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 1.1e-10 70.1 75 46.7
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 4.6e-09 64.7 63 54.0
BcaB01g03422 Brassica carinata HOM05D037851 ORTHO05D006822 7.3e-07 57.4 104 45.2
BcaB02g06981 Brassica carinata HOM05D037851 ORTHO05D006822 7.3e-07 57.4 104 45.2
BcaB02g06986 Brassica carinata HOM05D037851 ORTHO05D006822 7.3e-07 57.4 104 45.2
AL2G37880 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 4.7e-06 54.7 37 75.7


User provided reference genes

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