Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 1.2e-143 513.1 254 100.0
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 3.4e-125 451.8 254 87.8
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 1.0e-121 440.3 254 86.2
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 3.9e-121 438.3 254 85.4
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 1.9e-120 436.0 254 85.0
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 3.3e-120 435.3 254 85.4
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 2.6e-117 425.6 254 82.3
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 3.2e-115 418.7 254 81.5
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 7.1e-115 417.5 255 81.6
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 4.6e-114 414.8 254 81.5
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 2.3e-113 412.5 254 81.1
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 1.1e-112 410.2 254 79.5
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 1.7e-108 396.4 254 78.3
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 1.1e-104 383.6 240 80.4
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.7e-100 369.8 254 75.2
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 5.0e-100 368.2 251 74.1
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 2.1e-98 362.8 254 73.6
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 3.6e-98 362.1 252 72.2
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 4.6e-98 361.7 254 72.4
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 6.1e-98 361.3 221 79.6
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 1.0e-97 360.5 196 84.7
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 1.8e-97 359.8 196 84.7
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 2.3e-97 359.4 252 72.2
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 3.9e-97 358.6 248 70.6
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 3.9e-97 358.6 198 83.3
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 8.8e-97 357.5 253 72.3
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 1.1e-96 357.1 241 75.1
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 2.0e-96 356.3 227 77.1
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 2.0e-96 356.3 229 76.9
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 2.0e-96 356.3 242 73.6
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 2.0e-96 356.3 258 70.9
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 2.5e-96 355.9 195 85.1
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 2.5e-96 355.9 204 83.8
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 3.3e-96 355.5 226 76.1
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 4.3e-96 355.1 247 74.9
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 7.4e-96 354.4 257 68.9
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 9.7e-96 354.0 197 84.3
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 1.7e-95 353.2 250 72.4
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 1.7e-95 353.2 250 71.2
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 2.2e-95 352.8 250 72.0
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 2.2e-95 352.8 201 83.6
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.8e-95 352.4 251 72.1
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 8.2e-95 350.9 250 70.8
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 8.2e-95 350.9 255 72.2
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 1.4e-94 350.1 212 79.7
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.4e-94 350.1 224 76.8
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 1.4e-94 350.1 209 81.3
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 1.8e-94 349.7 217 77.0
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 1.8e-94 349.7 211 79.1
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 1.8e-94 349.7 251 71.3
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 1.8e-94 349.7 205 81.5
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 3.1e-94 349.0 224 75.9
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 4.1e-94 348.6 248 72.2
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 6.9e-94 347.8 203 82.3
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 9.1e-94 347.4 238 72.3
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 1.5e-93 346.7 226 76.1
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 1.5e-93 346.7 253 70.4
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 2.6e-93 345.9 213 78.4
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 3.4e-93 345.5 249 69.9
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 3.4e-93 345.5 255 68.6
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 3.4e-93 345.5 206 79.1
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 1.3e-92 343.6 284 64.4
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 5.0e-92 341.7 249 68.7
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 6.5e-92 341.3 215 77.7
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 1.1e-91 340.5 197 80.7
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 1.1e-91 340.5 198 78.3
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 1.4e-91 340.1 253 68.8
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 3.2e-91 339.0 253 68.8
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 1.2e-90 337.0 233 70.0
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 2.0e-88 329.7 203 77.8
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 2.2e-87 326.2 187 81.8
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 2.8e-87 325.9 256 66.8
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 4.8e-87 325.1 224 71.4
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 4.1e-86 322.0 243 69.1
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 9.1e-86 320.9 249 64.3
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 1.6e-85 320.1 191 78.5
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 2.0e-85 319.7 216 74.5
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 2.0e-85 319.7 251 66.9
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 7.2e-83 311.2 252 65.1
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 8.8e-81 304.3 211 72.5
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.6e-80 302.8 197 70.6
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 5.7e-80 301.6 185 74.1
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 5.7e-80 301.6 214 73.4
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 9.7e-80 300.8 165 84.2
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 1.1e-78 297.4 197 73.6
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.4e-78 297.0 206 71.8
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 2.0e-77 293.1 199 69.3
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.1e-75 287.3 199 71.4
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 4.7e-74 282.0 176 71.0
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 4.7e-74 282.0 188 74.5
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 9.8e-72 274.2 198 65.2
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 1.0e-68 264.2 252 60.3
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 5.0e-68 261.9 211 65.9
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 8.0e-66 254.6 249 57.4
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 2.6e-64 249.6 136 86.0
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.2e-63 246.5 147 78.2
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 4.7e-58 228.8 137 81.0
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 6.1e-58 228.4 172 62.2
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 6.4e-55 218.4 192 60.4
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 8.3e-55 218.0 192 59.9
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 7.8e-53 211.5 219 55.3
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 1.9e-51 206.8 200 51.5
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 1.3e-47 194.1 200 54.0
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 1.3e-44 184.1 163 63.2
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 9.5e-43 177.9 103 77.7
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 3.6e-42 176.0 149 53.0
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 5.2e-41 172.2 105 77.1
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 5.6e-27 125.6 71 84.5
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 1.6e-21 107.5 70 68.6
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 2.1e-21 107.1 175 38.3
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 1.4e-09 67.8 72 50.0


User provided reference genes

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