Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G5240 Aethionema arabicum HOM05D006151 ORTHO05D007487 8.1e-116 420.6 243 100.0
Sp1g18760 Schrenkiella parvula HOM05D006151 ORTHO05D007487 2.1e-76 289.7 237 69.6
CARHR021560 Cardamine hirsuta HOM05D006151 ORTHO05D007487 4.8e-76 288.5 245 66.9
AT1G21090 Arabidopsis thaliana HOM05D006151 ORTHO05D007487 2.6e-74 282.7 244 66.8
BcaB07g32102 Brassica carinata HOM05D006151 ORTHO05D007487 1.7e-73 280.0 237 67.5
AL1G34140 Arabidopsis lyrata HOM05D006151 ORTHO05D007487 6.5e-73 278.1 235 65.5
C05p19820 Brassica napus HOM05D006151 ORTHO05D007487 6.5e-73 278.1 234 67.1
BolC5t30681H Brassica oleracea HOM05D006151 ORTHO05D007487 6.5e-73 278.1 234 67.1
BraA06t24819Z Brassica rapa HOM05D006151 ORTHO05D007487 6.5e-73 278.1 235 66.8
A06p17160 Brassica napus HOM05D006151 ORTHO05D007487 3.2e-72 275.8 235 66.4
Carub.0001s2055 Capsella rubella HOM05D006151 ORTHO05D007487 4.2e-72 275.4 244 65.6
Thhalv10008611m.g Eutrema salsugineum HOM05D006151 ORTHO05D007487 1.6e-71 273.5 238 74.4
BcaB03g14281 Brassica carinata HOM05D006151 ORTHO05D007487 3.5e-71 272.3 237 65.0
A07p15290 Brassica napus HOM05D006151 ORTHO05D007487 5.3e-67 258.5 237 71.3
BraA07t29267Z Brassica rapa HOM05D006151 ORTHO05D007487 6.9e-67 258.1 237 71.3
C07p22470 Brassica napus HOM05D006151 ORTHO05D007487 1.2e-66 257.3 187 73.8
BolC7t42748H Brassica oleracea HOM05D006151 ORTHO05D007487 1.2e-66 257.3 241 70.5
BcaC06g34887 Brassica carinata HOM05D006151 ORTHO05D007487 2.0e-66 256.5 235 71.9
THA.LOC104813720 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 5.0e-65 251.9 175 69.7
THA.LOC104812035 Tarenaya hassleriana HOM05D006151 ORTHO05D007487 8.2e-60 234.6 186 66.7
BcaC05g26017 Brassica carinata HOM05D006151 ORTHO05D007487 6.5e-57 224.9 198 66.2
Cpa.g.sc21.206 Carica papaya HOM05D006151 ORTHO05D007487 1.2e-47 194.1 202 53.0
CSS0023884 Camellia sinensis var. sinensis HOM05D006151 ORTHO05D007487 1.4e-46 190.7 182 54.9
Ciclev10002306m.g Citrus clementina HOM05D006151 ORTHO05D007487 3.3e-45 186.0 181 55.2
Cfa018318 Carpinus fangiana HOM05D006151 ORTHO05D007487 5.7e-45 185.3 172 57.6
Duzib041G0750 Durio zibethinus HOM05D006151 ORTHO05D007487 7.4e-45 184.9 187 52.4
COL.COLO4_04528 Corchorus olitorius HOM05D006151 ORTHO05D007487 9.7e-45 184.5 193 54.4
Atru.chr13.2098 Acer truncatum HOM05D006151 ORTHO05D007487 1.3e-44 184.1 187 56.7
TWI60G0448 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 6.3e-44 181.8 177 57.6
CANSAT25G1414 Cannabis sativa HOM05D006151 ORTHO05D007487 8.2e-44 181.4 188 51.1
Potri.002G067600 Populus trichocarpa HOM05D006151 ORTHO05D007487 1.8e-43 180.3 189 52.4
Duzib116G0486 Durio zibethinus HOM05D006151 ORTHO05D007487 2.4e-43 179.9 186 53.8
PGR044G2378 Punica granatum HOM05D006151 ORTHO05D007487 4.1e-43 179.1 191 52.9
PGR100G0011 Punica granatum HOM05D006151 ORTHO05D007487 4.1e-43 179.1 191 52.9
FAN27G2560 Fragaria x ananassa HOM05D006151 ORTHO05D007487 5.3e-43 178.7 187 51.9
FvH4_2g13650 Fragaria vesca HOM05D006151 ORTHO05D007487 7.0e-43 178.3 187 51.9
Gorai.009G254700 Gossypium raimondii HOM05D006151 ORTHO05D007487 7.0e-43 178.3 168 56.0
FAN15G1313 Fragaria x ananassa HOM05D006151 ORTHO05D007487 9.1e-43 177.9 187 51.9
FAN24G0867 Fragaria x ananassa HOM05D006151 ORTHO05D007487 9.1e-43 177.9 187 51.9
Manes.02G180000 Manihot esculenta HOM05D006151 ORTHO05D007487 1.6e-42 177.2 185 54.6
Gohir.D05G244900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 3.5e-42 176.0 173 53.8
Rhsim11G0083500 Rhododendron simsii HOM05D006151 ORTHO05D007487 3.5e-42 176.0 186 51.1
Thecc.08G153600 Theobroma cacao HOM05D006151 ORTHO05D007487 3.5e-42 176.0 187 51.9
Gohir.A05G243900 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.5e-42 175.6 173 54.3
FAN20G0746 Fragaria x ananassa HOM05D006151 ORTHO05D007487 5.9e-42 175.3 187 50.8
Dinv25871 Davidia involucrata HOM05D006151 ORTHO05D007487 1.0e-41 174.5 196 50.5
Lj5g0026688 Lotus japonicus HOM05D006151 ORTHO05D007487 1.0e-41 174.5 197 50.8
Actinidia04761 Actinidia chinensis HOM05D006151 ORTHO05D007487 1.3e-41 174.1 197 51.8
Eucgr.F04235 Eucalyptus grandis HOM05D006151 ORTHO05D007487 1.3e-41 174.1 189 50.3
Gorai.005G078700 Gossypium raimondii HOM05D006151 ORTHO05D007487 5.0e-41 172.2 180 52.2
GSVIVG01034539001 Vitis vinifera HOM05D006151 ORTHO05D007487 6.5e-41 171.8 184 51.1
Potri.005G192800 Populus trichocarpa HOM05D006151 ORTHO05D007487 8.5e-41 171.4 192 51.6
Gohir.A02G063800 Gossypium hirsutum HOM05D006151 ORTHO05D007487 1.9e-40 170.2 179 50.3
Sopen04g027470 Solanum pennellii HOM05D006151 ORTHO05D007487 3.2e-40 169.5 187 50.3
Gohir.D02G069400 Gossypium hirsutum HOM05D006151 ORTHO05D007487 4.2e-40 169.1 180 51.7
Solyc04g071500.4 Solanum lycopersicum HOM05D006151 ORTHO05D007487 4.2e-40 169.1 187 51.3
TAR628G1632 Trochodendron aralioides HOM05D006151 ORTHO05D007487 4.2e-40 169.1 186 48.9
RcHm_v2.0_Chr6g0275291 Rosa chinensis HOM05D006151 ORTHO05D007487 5.5e-40 168.7 186 48.9
PGR080G0005 Punica granatum HOM05D006151 ORTHO05D007487 1.2e-39 167.5 170 53.5
TWI34G1794 Tripterygium wilfordii HOM05D006151 ORTHO05D007487 1.2e-39 167.5 247 45.3
CAN.G268.27 Capsicum annuum HOM05D006151 ORTHO05D007487 2.1e-39 166.8 185 48.1
vmacro01457 Vaccinium macrocarpon HOM05D006151 ORTHO05D007487 2.7e-39 166.4 188 51.6
Cc10_g14430 Coffea canephora HOM05D006151 ORTHO05D007487 3.6e-39 166.0 183 50.8
Prupe.8G031400 Prunus persica HOM05D006151 ORTHO05D007487 8.0e-39 164.9 197 46.2
Nitab4.5_0001062g0090 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.4e-38 164.1 179 50.8
PGSC0003DMG400024091 Solanum tuberosum HOM05D006151 ORTHO05D007487 1.4e-38 164.1 169 49.7
ClCG08G007050 Citrullus lanatus HOM05D006151 ORTHO05D007487 1.8e-38 163.7 194 47.9
Peaxi162Scf00599g00048 Petunia axillaris HOM05D006151 ORTHO05D007487 3.0e-38 162.9 178 49.4
MELO3C008336.2 Cucumis melo HOM05D006151 ORTHO05D007487 4.0e-38 162.5 192 49.0
Nitab4.5_0009071g0020 Nicotiana tabacum HOM05D006151 ORTHO05D007487 6.8e-38 161.8 179 50.3
DCAR_001140 Daucus carota HOM05D006151 ORTHO05D007487 8.8e-38 161.4 182 48.9
Lalb_Chr06g0161651 Lupinus albus HOM05D006151 ORTHO05D007487 2.6e-37 159.8 194 46.9
MD10G1026200 Malus domestica HOM05D006151 ORTHO05D007487 2.6e-37 159.8 194 45.4
MD05G1026900 Malus domestica HOM05D006151 ORTHO05D007487 4.4e-37 159.1 194 46.9
Medtr1g098580 Medicago truncatula HOM05D006151 ORTHO05D007487 7.5e-37 158.3 186 52.2
Oeu046040.1 Olea europaea HOM05D006151 ORTHO05D007487 7.5e-37 158.3 188 48.9
Sed0016357 Sechium edule HOM05D006151 ORTHO05D007487 7.5e-37 158.3 192 44.8
TAR381G1121 Trochodendron aralioides HOM05D006151 ORTHO05D007487 7.5e-37 158.3 185 46.5
Phvul.007G081100 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 9.7e-37 157.9 186 49.5
VMungo0720G2232 Vigna mungo HOM05D006151 ORTHO05D007487 9.7e-37 157.9 185 51.4
Glyma.16G166000 Glycine max HOM05D006151 ORTHO05D007487 2.2e-36 156.8 181 48.6
SGA_v2.0_scaffold24G10349 Striga asiatica HOM05D000219 ORTHO05D000226 2.2e-36 156.8 165 52.1
Glyma.20G168200 Glycine max HOM05D006151 ORTHO05D007487 2.8e-36 156.4 183 51.4
Dinv41078 Davidia involucrata HOM05D006151 ORTHO05D007487 4.8e-36 155.6 205 47.8
AUR62013592 Chenopodium quinoa HOM05D006151 ORTHO05D007487 8.3e-36 154.8 181 45.9
QL02p039028 Quercus lobata HOM05D006151 ORTHO05D007487 1.1e-35 154.5 179 48.6
Glyma.10G223700 Glycine max HOM05D006151 ORTHO05D007487 1.8e-35 153.7 183 50.3
Duzib093G0584 Durio zibethinus HOM05D006151 ORTHO05D007487 3.1e-35 152.9 191 48.7
arahy.Tifrunner.gnm1.ann1.2F6CI2 Arachis hypogaea HOM05D006151 ORTHO05D007487 4.1e-35 152.5 189 48.1
MSTRG.1087 Avicennia marina HOM05D006151 ORTHO05D007487 7.0e-35 151.8 183 47.5
AUR62026702 Chenopodium quinoa HOM05D006151 ORTHO05D007487 1.2e-34 151.0 186 44.6
Migut.C00998 Erythranthe guttata HOM05D006151 ORTHO05D007487 1.6e-34 150.6 188 48.9
CiPaw.15G015800 Carya illinoinensis HOM05D006151 ORTHO05D007487 2.0e-34 150.2 195 47.7
Hma1.2p1_0105F.1_g050630 Hydrangea macrophylla HOM05D006151 ORTHO05D007487 1.3e-33 147.5 189 48.1
EL10Ac1g01556 Beta vulgaris HOM05D006151 ORTHO05D007487 1.7e-33 147.1 178 44.9
Psat6g192320 Pisum sativum HOM05D006151 ORTHO05D007487 1.7e-33 147.1 185 48.6
PSO447G0272 Papaver somniferum HOM05D006151 ORTHO05D007487 2.9e-33 146.4 189 47.6
arahy.Tifrunner.gnm1.ann1.5IW37T Arachis hypogaea HOM05D006151 ORTHO05D007487 5.0e-33 145.6 190 46.8
Hund26694 Selenicereus undatus HOM05D006151 ORTHO05D007487 5.0e-33 145.6 192 45.8
VMungo0464G0684 Vigna mungo HOM05D006151 ORTHO05D007487 8.5e-33 144.8 179 45.3
Phvul.004G093600 Phaseolus vulgaris HOM05D006151 ORTHO05D007487 1.9e-32 143.7 175 43.4
Actinidia29533 Actinidia chinensis HOM05D006151 ORTHO05D007487 4.2e-32 142.5 185 49.2
PSO210G3290 Papaver somniferum HOM05D006151 ORTHO05D007487 5.5e-32 142.1 189 47.1
Manes.18G092600 Manihot esculenta HOM05D006151 ORTHO05D007487 7.2e-32 141.7 182 45.1
Nitab4.5_0002487g0030 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.6e-31 140.6 182 45.6
Nn5g28758 Nelumbo nucifera HOM05D006151 ORTHO05D007487 4.0e-30 136.0 182 43.4
Ca_10677_v3 Cicer arietinum L. HOM05D006151 ORTHO05D007487 8.8e-30 134.8 188 45.2
CsaV3_6G005160 Cucumis sativus L. HOM05D006151 ORTHO05D007487 8.8e-30 134.8 136 52.2
Peaxi162Scf01294g00115 Petunia axillaris HOM05D006151 ORTHO05D007487 1.5e-29 134.0 164 49.4
Aqoxy5G02075 Aquilegia oxysepala HOM05D006151 ORTHO05D007487 2.0e-29 133.7 186 46.2
MBI09_g40713_MAGBIO Magnolia biondii HOM05D006151 ORTHO05D007487 7.5e-29 131.7 166 44.6
Nn1g06074 Nelumbo nucifera HOM05D006151 ORTHO05D007487 3.7e-28 129.4 187 41.2
TPR.G17045 Trifolium pratense HOM05D006151 ORTHO05D007487 3.7e-28 129.4 188 45.7
HanXRQChr05g0161971 Helianthus annuus HOM05D006151 ORTHO05D007487 8.3e-28 128.3 218 40.4
Hund17438 Selenicereus undatus HOM05D006151 ORTHO05D007487 5.4e-27 125.6 238 34.0
Sed0009804 Sechium edule HOM05D006151 ORTHO05D007487 3.5e-26 122.9 183 45.9
Lsat_1_v5_gn_6_100560 Lactuca sativa HOM05D006151 ORTHO05D007487 5.9e-26 122.1 213 38.5
unitig_748.g7705 Utricularia gibba HOM05D006151 ORTHO05D007487 3.8e-25 119.4 181 41.4
ECA246G2194 Erigeron canadensis HOM05D006151 ORTHO05D007487 4.2e-24 115.9 211 37.0
Ah.05g167920 Amaranthus hybridus HOM05D006151 ORTHO05D007487 8.3e-20 101.7 181 38.1
HPP92_004418 Vanilla planifolia HOM05D006151 ORTHO05D007487 1.6e-15 87.4 145 38.6
CDE08G0602 Ceratophyllum demersum HOM05D006151 ORTHO05D007487 2.3e-14 83.6 174 36.8
Nitab4.5_0010143g0010 Nicotiana tabacum HOM05D006151 ORTHO05D007487 1.2e-13 81.3 176 37.5
Lj7C374T8 Lonicera japonica HOM05D006151 ORTHO05D007487 4.9e-12 75.9 108 45.4
AagrBONN_evm.TU.Sc2ySwM_295.7 Anthoceros agrestis HOM05D024008 ORTHO05D007487 8.9e-06 55.1 99 34.3


User provided reference genes

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