Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 9.6e-195 683.3 349 100.0
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.1e-147 526.9 349 77.7
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 1.7e-146 523.1 350 78.0
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 4.1e-145 518.5 363 74.7
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 5.3e-145 518.1 369 73.4
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 2.5e-142 509.2 366 72.1
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 2.5e-142 509.2 366 72.1
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 1.2e-141 506.9 347 76.7
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 4.7e-141 505.0 367 71.9
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 1.0e-140 503.8 352 74.1
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 4.8e-138 495.0 367 71.1
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 4.5e-136 488.4 369 69.6
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.0e-135 487.3 369 69.4
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 2.4e-121 439.5 349 68.5
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 1.7e-111 406.8 240 84.6
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 9.5e-102 374.4 360 57.2
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 1.4e-100 370.5 353 57.2
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 6.8e-100 368.2 360 58.1
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 2.6e-99 366.3 362 58.3
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 6.0e-96 355.1 360 56.7
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 7.3e-94 348.2 309 57.9
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 9.5e-94 347.8 325 58.2
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 1.6e-93 347.1 359 53.5
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 4.7e-93 345.5 309 57.9
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 8.1e-93 344.7 331 58.3
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.1e-92 344.4 309 57.9
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 1.1e-92 344.4 278 64.4
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 2.3e-92 343.2 252 71.0
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 5.2e-92 342.0 307 60.3
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.0e-91 340.1 327 56.9
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 3.4e-91 339.3 355 54.9
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 5.8e-91 338.6 362 55.2
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 4.9e-90 335.5 321 57.9
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 8.4e-90 334.7 310 58.1
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 1.1e-89 334.3 356 53.9
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.4e-89 334.0 269 63.2
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 3.2e-89 332.8 326 56.4
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 3.5e-88 329.3 275 60.4
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 7.8e-88 328.2 318 56.6
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 1.0e-87 327.8 363 52.6
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 1.0e-87 327.8 302 58.6
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 2.3e-87 326.6 274 63.1
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 5.1e-87 325.5 302 58.9
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 8.6e-87 324.7 343 53.4
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 8.6e-87 324.7 294 60.9
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 1.9e-86 323.6 263 61.2
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 1.2e-85 320.9 316 56.0
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 4.7e-85 318.9 283 58.7
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 6.2e-85 318.5 301 57.8
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 2.4e-84 316.6 281 59.8
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 3.1e-84 316.2 289 61.2
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 5.2e-84 315.5 276 59.8
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 6.9e-84 315.1 359 50.1
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 6.9e-84 315.1 287 58.2
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 5.8e-83 312.0 280 57.9
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 7.6e-83 311.6 272 58.5
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 9.9e-83 311.2 258 62.8
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.3e-82 310.8 293 57.7
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.3e-82 310.8 272 59.6
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.3e-82 310.8 262 61.8
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 4.9e-82 308.9 237 65.0
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 6.4e-82 308.5 336 51.8
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 8.4e-82 308.1 299 57.2
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 1.1e-81 307.8 272 58.1
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 1.9e-81 307.0 270 58.9
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 1.9e-81 307.0 217 69.1
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 4.2e-81 305.8 292 55.8
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 7.1e-81 305.1 282 57.8
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 1.2e-80 304.3 300 54.3
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 1.2e-80 304.3 303 55.8
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 1.2e-80 304.3 294 57.5
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 1.6e-80 303.9 256 62.9
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 3.5e-80 302.8 288 56.9
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 3.5e-80 302.8 268 61.2
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 4.6e-80 302.4 344 50.6
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 7.8e-80 301.6 238 68.1
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 7.8e-80 301.6 259 60.6
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 7.8e-80 301.6 271 58.7
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.0e-79 299.7 331 51.7
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 6.6e-79 298.5 259 62.9
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 1.1e-78 297.7 275 58.2
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.9e-78 297.0 331 51.4
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.9e-78 297.0 259 61.8
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 3.3e-78 296.2 280 56.4
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 3.3e-78 296.2 307 53.7
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 5.6e-78 295.4 263 60.8
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 7.3e-78 295.0 328 52.1
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 7.3e-78 295.0 360 49.7
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 2.1e-77 293.5 294 54.4
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 2.8e-77 293.1 286 55.2
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 4.8e-77 292.4 222 67.6
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.5e-75 287.3 248 61.3
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.0e-75 287.0 263 57.0
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 2.0e-75 287.0 347 49.9
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 3.4e-75 286.2 263 59.7
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.7e-74 283.9 355 49.3
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 3.8e-74 282.7 250 59.6
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 1.1e-73 281.2 300 52.7
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 1.1e-73 281.2 228 63.2
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 1.1e-73 281.2 248 59.7
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 3.5e-72 276.2 193 72.0
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 6.0e-72 275.4 273 54.6
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 7.9e-72 275.0 202 67.3
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 3.1e-68 263.1 200 69.5
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 5.8e-67 258.8 189 68.3
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 3.1e-60 236.5 220 54.5
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 4.0e-60 236.1 237 55.3
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 9.0e-60 235.0 255 50.6
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 1.5e-59 234.2 261 48.7
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 2.6e-59 233.4 255 52.2
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 2.9e-58 229.9 155 73.5
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 2.5e-49 200.3 171 56.1
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 7.2e-49 198.7 230 47.8
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 2.1e-48 197.2 171 57.9
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 1.0e-47 194.9 121 75.2
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.1e-46 191.4 191 51.8
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.3e-45 188.0 186 51.6
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 4.8e-45 186.0 103 82.5
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 1.0e-31 141.7 79 79.7
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 9.7e-30 135.2 69 87.0
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 1.1e-17 95.1 135 43.7
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 3.6e-16 90.1 178 37.6
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 1.8e-15 87.8 57 70.2
BcaC07g39055 Brassica carinata HOM05D005712 ORTHO05D032168 2.0e-14 84.3 152 38.8
C08p20390 Brassica napus HOM05D005712 ORTHO05D032168 2.2e-13 80.9 161 36.6
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 2.8e-08 63.9 43 72.1
BcaB07g32077 Brassica carinata HOM05D005712 ORTHO05D007865 5.2e-07 59.7 67 55.2


User provided reference genes

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