Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G4950 Aethionema arabicum HOM05D007494 ORTHO05D009621 8.2e-224 780.0 382 100.0
Aa31LG7G4960 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.9e-112 409.5 391 59.3
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.9e-83 313.2 310 57.7
Carub.0001s2024 Capsella rubella HOM05D007494 ORTHO05D009621 3.2e-74 283.1 396 41.4
AL1G33790 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 3.3e-71 273.1 399 40.9
Aa31LG8G15370 Aethionema arabicum HOM05D007494 ORTHO05D009621 4.3e-71 272.7 341 49.0
AT1G20790 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.1e-70 270.4 368 44.0
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 5.8e-68 262.3 398 39.9
Sp1g18490 Schrenkiella parvula HOM05D007494 ORTHO05D009621 1.2e-65 254.6 373 41.6
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.5e-63 247.7 383 40.2
BcaB01g00617 Brassica carinata HOM05D007494 ORTHO05D009621 2.1e-62 243.8 398 38.4
Thhalv10011090m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 3.6e-62 243.0 403 39.5
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 4.7e-62 242.7 384 37.5
A08p29250 Brassica napus HOM05D007494 ORTHO05D009621 8.1e-62 241.9 369 39.6
AT1G20795 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.8e-61 240.7 384 38.3
BraA08t34860Z Brassica rapa HOM05D007494 ORTHO05D009621 5.2e-61 239.2 369 39.3
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.3e-59 234.6 372 38.2
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.1e-58 231.5 381 39.9
BcaB03g12853 Brassica carinata HOM05D007494 ORTHO05D009621 1.2e-57 228.0 369 37.9
BraA09t39811Z Brassica rapa HOM05D007494 ORTHO05D009621 2.3e-56 223.8 399 36.8
BcaC07g39053 Brassica carinata HOM05D007494 ORTHO05D009621 8.6e-56 221.9 371 37.5
A09p43410 Brassica napus HOM05D007494 ORTHO05D009621 8.6e-56 221.9 395 38.2
C08p20370 Brassica napus HOM05D007494 ORTHO05D009621 8.6e-56 221.9 371 37.5
BolC8t49665H Brassica oleracea HOM05D007494 ORTHO05D009621 8.6e-56 221.9 371 37.5
BraA09t39810Z Brassica rapa HOM05D007494 ORTHO05D009621 1.5e-55 221.1 395 38.5
C08p25460 Brassica napus HOM05D007494 ORTHO05D009621 1.2e-54 218.0 375 38.9
AT1G57580 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.1e-54 217.2 402 35.3
THA.LOC104813247 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 3.6e-54 216.5 366 36.6
BcaC07g39504 Brassica carinata HOM05D007494 ORTHO05D009621 6.2e-54 215.7 374 37.2
C08p25490 Brassica napus HOM05D007494 ORTHO05D009621 6.2e-54 215.7 374 37.2
AL1G45220 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 6.8e-53 212.2 400 38.0
AT1G20735 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 6.8e-53 212.2 386 38.3
AL1G33230 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.6e-52 210.3 382 37.2
C08p21040 Brassica napus HOM05D007494 ORTHO05D009621 2.6e-52 210.3 364 39.0
C08p25440 Brassica napus HOM05D007494 ORTHO05D009621 1.7e-51 207.6 381 37.0
BolC8t49740H Brassica oleracea HOM05D007494 ORTHO05D009621 2.2e-51 207.2 369 37.9
Sp5g11780 Schrenkiella parvula HOM05D007494 ORTHO05D009621 6.4e-51 205.7 322 41.3
BcaB07g30752 Brassica carinata HOM05D007494 ORTHO05D009621 1.4e-50 204.5 377 35.8
BcaC07g39120 Brassica carinata HOM05D007494 ORTHO05D009621 1.9e-50 204.1 367 38.4
AT1G20940 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 5.4e-50 202.6 373 37.3
BcaC07g39499 Brassica carinata HOM05D007494 ORTHO05D009621 1.6e-49 201.1 370 37.0
BcaB03g12780 Brassica carinata HOM05D007494 ORTHO05D009621 2.7e-49 200.3 366 36.6
BcaB03g13899 Brassica carinata HOM05D007494 ORTHO05D009621 2.7e-49 200.3 369 36.6
BraA08t34811Z Brassica rapa HOM05D007494 ORTHO05D009621 2.7e-49 200.3 352 37.8
A08p28830 Brassica napus HOM05D007494 ORTHO05D009621 2.3e-48 197.2 352 37.2
Carub.0001s2057 Capsella rubella HOM05D007494 ORTHO05D009621 5.6e-47 192.6 392 34.4
AL1G33970 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 9.6e-47 191.8 371 36.1
Carub.0005s1178 Capsella rubella HOM05D007494 ORTHO05D009621 2.8e-46 190.3 371 36.4
BcaB02g08200 Brassica carinata HOM05D007494 ORTHO05D009621 1.8e-45 187.6 371 35.3
BcaB03g11879 Brassica carinata HOM05D007494 ORTHO05D009621 4.0e-45 186.4 365 35.1
A03p18740 Brassica napus HOM05D007494 ORTHO05D009621 4.0e-45 186.4 366 38.0
AT1G20360 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 9.0e-45 185.3 309 40.5
BraA03t11134Z Brassica rapa HOM05D007494 ORTHO05D009621 1.5e-44 184.5 366 38.0
BolC8t49745H Brassica oleracea HOM05D007494 ORTHO05D009621 5.8e-44 182.6 322 39.1
AT1G20240 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.9e-43 180.3 296 38.9
C08p21030 Brassica napus HOM05D007494 ORTHO05D009621 3.5e-41 173.3 258 43.0
Carub.0001s1977 Capsella rubella HOM05D007494 ORTHO05D009621 1.9e-39 167.5 288 38.5
Thhalv10012024m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.3e-38 164.9 342 35.4
Thhalv10012172m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.1e-38 164.1 385 30.9
BolC8t50168H Brassica oleracea HOM05D007494 ORTHO05D009621 2.8e-38 163.7 371 32.9
Carub.0004s0895 Capsella rubella HOM05D007494 ORTHO05D009621 1.4e-37 161.4 382 33.8
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 1.5e-36 157.9 368 31.5
AT1G20800 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 3.4e-36 156.8 401 30.2
BolC8t50169H Brassica oleracea HOM05D007494 ORTHO05D009621 3.4e-36 156.8 256 41.0
Aa31LG8G15340 Aethionema arabicum HOM05D007494 ORTHO05D009621 4.5e-36 156.4 165 53.3
Carub.0001s2025 Capsella rubella HOM05D007494 ORTHO05D009621 6.4e-35 152.5 398 30.2
A09p43390 Brassica napus HOM05D007494 ORTHO05D009621 1.8e-32 144.4 232 36.6
AL1G33090 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.3e-30 138.3 274 35.4
CARHR020740 Cardamine hirsuta HOM05D007494 ORTHO05D009621 1.6e-30 137.9 254 35.8
BcaC07g39502 Brassica carinata HOM05D007494 ORTHO05D009621 5.8e-28 129.4 206 39.8
C08p25470 Brassica napus HOM05D007494 ORTHO05D009621 5.8e-28 129.4 206 39.8
AT1G57565 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 7.6e-28 129.0 187 37.4
BcaC07g39114 Brassica carinata HOM05D007494 ORTHO05D009621 1.3e-27 128.3 352 31.8
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 4.9e-27 126.3 352 28.4
BolC8t50166H Brassica oleracea HOM05D007494 ORTHO05D009621 3.2e-26 123.6 319 31.7
AT1G20690 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 1.2e-25 121.7 221 37.1
BcaC07g39500 Brassica carinata HOM05D007494 ORTHO05D009621 8.7e-24 115.5 159 40.3
Thhalv10011940m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.5e-23 114.0 330 28.8
Aa31LG8G15320 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.8e-22 110.5 88 59.1
Thhalv10012123m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 6.9e-21 105.9 289 32.2
BcaB01g00618 Brassica carinata HOM05D007494 ORTHO05D009621 2.0e-20 104.4 216 33.3
Thhalv10012236m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.0e-20 104.4 346 27.2
Duzib041G0294 Durio zibethinus HOM05D007494 ORTHO05D009621 2.2e-19 100.9 346 28.9
A09p43460 Brassica napus HOM05D007494 ORTHO05D009621 1.8e-16 91.3 308 27.6
Sp1g18390 Schrenkiella parvula HOM05D007494 ORTHO05D009621 6.7e-16 89.4 156 37.2
Potri.005G254500 Populus trichocarpa HOM05D000664 ORTHO05D010866 1.5e-15 88.2 363 28.1
Potri.005G254633 Populus trichocarpa HOM05D000664 ORTHO05D010866 1.5e-15 88.2 364 27.7
Oeu004534.1 Olea europaea HOM05D008697 ORTHO05D010866 1.5e-12 78.2 339 26.0
Thhalv10012136m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 8.5e-11 72.4 322 27.3
C08p21080 Brassica napus HOM05D007494 ORTHO05D009621 2.5e-10 70.9 117 41.9
Nitab4.5_0000430g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 3.2e-10 70.5 236 31.8
Nitab4.5_0003309g0040 Nicotiana tabacum HOM05D008697 ORTHO05D010866 2.1e-09 67.8 236 30.1
AT1G20290 Arabidopsis thaliana HOM05D007494 ORTHO05D009621 2.7e-09 67.4 149 35.6
EL10As6g23638 Beta vulgaris HOM05D000007 ORTHO05D000017 6.1e-09 66.2 266 29.3
AL1G32830 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 7.9e-09 65.9 67 50.7
AUR62014647 Chenopodium quinoa HOM05D000007 ORTHO05D000017 7.9e-09 65.9 287 26.8
Thecc.08G063600 Theobroma cacao HOM05D007494 ORTHO05D009621 1.4e-08 65.1 131 32.1
Nitab4.5_0005200g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.8e-08 64.7 232 28.9
Medtr6g053260 Medicago truncatula HOM05D000007 ORTHO05D003103 5.1e-08 63.2 322 26.7
CAN.G1631.3 Capsicum annuum HOM05D008697 ORTHO05D010866 6.7e-08 62.8 240 27.1
PGSC0003DMG400025634 Solanum tuberosum HOM05D008697 ORTHO05D010866 6.7e-08 62.8 234 26.9
BraA09t39808Z Brassica rapa HOM05D007494 ORTHO05D009621 8.8e-08 62.4 112 42.0
Peaxi162Scf00001g00056 Petunia axillaris HOM05D008697 ORTHO05D010866 8.8e-08 62.4 242 23.1
CAN.G1631.2 Capsicum annuum HOM05D008697 ORTHO05D010866 1.1e-07 62.0 247 25.1
HanXRQChr13g0419551 Helianthus annuus HOM05D000007 ORTHO05D003666 1.1e-07 62.0 332 26.5
GSVIVG01026445001 Vitis vinifera HOM05D002420 ORTHO05D002422 1.5e-07 61.6 297 24.2
BraA09t39809Z Brassica rapa HOM05D007494 ORTHO05D009621 2.0e-07 61.2 100 35.0
CiPaw.01G036200 Carya illinoinensis HOM05D002420 ORTHO05D002422 2.5e-07 60.8 175 32.6
Peaxi162Scf00171g00817 Petunia axillaris HOM05D008697 ORTHO05D010866 2.5e-07 60.8 209 27.8
PGSC0003DMG400019444 Solanum tuberosum HOM05D002420 ORTHO05D002422 3.3e-07 60.5 173 28.9
SalBow7G0422 Salvia bowleyana HOM05D000007 ORTHO05D000017 4.3e-07 60.1 293 25.6
Sopen03g029630 Solanum pennellii HOM05D008697 ORTHO05D010923 4.3e-07 60.1 167 28.1
TAR376G1077 Trochodendron aralioides HOM05D002420 ORTHO05D002422 4.3e-07 60.1 242 27.7
A09p43420 Brassica napus HOM05D007494 ORTHO05D009621 5.7e-07 59.7 94 29.8
BraA08t34812Z Brassica rapa HOM05D007494 ORTHO05D009621 5.7e-07 59.7 66 47.0
Peaxi162Scf00048g00194 Petunia axillaris HOM05D000007 ORTHO05D000017 7.4e-07 59.3 265 26.8
AL1G33800 Arabidopsis lyrata HOM05D013746 ORTHO05D015945 9.7e-07 58.9 45 53.3
Lalb_Chr05g0225771 Lupinus albus HOM05D002420 ORTHO05D002422 1.7e-06 58.2 312 23.4
RcHm_v2.0_Chr2g0101881 Rosa chinensis HOM05D002420 ORTHO05D002422 1.7e-06 58.2 176 33.0
vmacro20419 Vaccinium macrocarpon HOM05D002420 ORTHO05D002422 1.7e-06 58.2 307 22.5
COL.COLO4_37366 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.8e-06 57.4 256 27.3
DCAR_011704 Daucus carota HOM05D000007 ORTHO05D000017 2.8e-06 57.4 274 24.5
Rhsim10G0188800 Rhododendron simsii HOM05D002420 ORTHO05D002422 2.8e-06 57.4 160 25.0
Sopen03g029650 Solanum pennellii HOM05D008697 ORTHO05D010866 2.8e-06 57.4 168 26.8
CiPaw.01G036300 Carya illinoinensis HOM05D002420 ORTHO05D002422 4.8e-06 56.6 208 28.4
AL8G44280 Arabidopsis lyrata HOM05D000015 ORTHO05D000734 6.3e-06 56.2 102 36.3
CAN.G1631.9 Capsicum annuum HOM05D008697 ORTHO05D010866 6.3e-06 56.2 243 26.7
MD15G1264700 Malus domestica HOM05D002420 ORTHO05D002422 6.3e-06 56.2 171 33.9
PSO081G0128 Papaver somniferum HOM05D000007 ORTHO05D000676 6.3e-06 56.2 256 23.0
Peaxi162Scf00251g00041 Petunia axillaris HOM05D008697 ORTHO05D010866 6.3e-06 56.2 224 22.8
Ah.09g231660 Amaranthus hybridus HOM05D002420 ORTHO05D002422 8.2e-06 55.8 139 29.5


User provided reference genes

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