Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G430 Aethionema arabicum HOM05D012449 ORTHO05D010672 6.3e-85 318.2 273 100.0
Carub.0001s1564 Capsella rubella HOM05D012449 ORTHO05D010672 7.4e-25 118.6 285 58.6
BolC8t52019H Brassica oleracea HOM05D012449 ORTHO05D010672 4.8e-24 115.9 101 60.4
A09p61130 Brassica napus HOM05D012449 ORTHO05D010672 6.2e-24 115.5 98 61.2
BraA09t41487Z Brassica rapa HOM05D012449 ORTHO05D010672 6.2e-24 115.5 98 61.2
BcaB03g14516 Brassica carinata HOM05D012449 ORTHO05D010672 1.4e-20 104.4 83 63.9
C08p44730 Brassica napus HOM05D012449 ORTHO05D010672 1.1e-17 94.7 100 52.0
BcaC07g41475 Brassica carinata HOM05D012449 ORTHO05D010672 5.7e-17 92.4 52 82.7
AL1G27990 Arabidopsis lyrata HOM05D012449 ORTHO05D010672 1.3e-13 81.3 293 54.3
THA.LOC104813310 Tarenaya hassleriana HOM05D010060 ORTHO05D010672 1.4e-12 77.8 98 48.0
Prupe.3G095500 Prunus persica HOM05D010060 ORTHO05D010672 2.7e-11 73.6 51 68.6
FvH4_1g03660 Fragaria vesca HOM05D036469 ORTHO05D010672 1.0e-10 71.6 121 38.8
FAN19G1720 Fragaria x ananassa HOM05D036469 ORTHO05D010672 1.0e-10 71.6 121 38.8
Thecc.06G037600 Theobroma cacao HOM05D010060 ORTHO05D010672 2.3e-10 70.5 97 45.4
Nn8g39734 Nelumbo nucifera HOM05D010060 ORTHO05D010672 6.7e-10 68.9 46 65.2
MELO3C017856.2 Cucumis melo HOM05D010060 ORTHO05D010672 2.5e-09 67.0 93 41.9
Potri.003G179301 Populus trichocarpa HOM05D010060 ORTHO05D010672 2.5e-09 67.0 112 38.4
CiPaw.02G160700 Carya illinoinensis HOM05D010060 ORTHO05D010672 1.3e-08 64.7 44 61.4
Sabra03G0131400 Salix brachista HOM05D010060 ORTHO05D010672 1.6e-08 64.3 96 42.7
PSO832G3355 Papaver somniferum HOM05D010060 ORTHO05D010672 2.8e-08 63.5 40 67.5
COL.COLO4_26651 Corchorus olitorius HOM05D010060 ORTHO05D010672 3.7e-08 63.2 36 72.2
FAN05G1812 Fragaria x ananassa HOM05D036469 ORTHO05D010672 4.8e-08 62.8 118 37.3
ClCG07G012370 Citrullus lanatus HOM05D010060 ORTHO05D010672 1.1e-07 61.6 93 39.8
EL10Ac8g19448 Beta vulgaris HOM05D010060 ORTHO05D010672 1.4e-07 61.2 44 61.4
Gohir.A05G121000 Gossypium hirsutum HOM05D010060 ORTHO05D010672 3.1e-07 60.1 40 65.0
Gohir.D05G122000 Gossypium hirsutum HOM05D010060 ORTHO05D010672 4.1e-07 59.7 40 65.0
Gorai.009G125500 Gossypium raimondii HOM05D010060 ORTHO05D010672 4.1e-07 59.7 40 65.0
CANSAT56G0640 Cannabis sativa HOM05D010060 ORTHO05D010672 5.3e-07 59.3 96 39.6
Phvul.010G159300 Phaseolus vulgaris HOM05D012449 ORTHO05D010672 3.4e-06 56.6 98 35.7


User provided reference genes

Program Settings