Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 6.7e-215 750.4 367 100.0
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 3.9e-146 521.9 354 73.4
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 4.7e-144 515.0 354 71.2
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 1.8e-143 513.1 354 71.5
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 4.0e-143 511.9 355 71.3
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 1.2e-142 510.4 356 71.9
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 1.6e-139 500.0 354 70.3
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 2.4e-135 486.1 355 69.3
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 5.3e-135 485.0 355 67.3
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 2.6e-134 482.6 347 68.9
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 1.7e-133 479.9 347 68.9
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 3.7e-128 462.2 300 73.7
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 1.3e-120 437.2 278 74.8
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 1.4e-108 397.1 349 57.0
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 1.8e-106 390.2 308 61.0
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 5.7e-105 385.2 359 54.9
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 1.6e-104 383.6 356 55.1
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 8.2e-104 381.3 343 56.9
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 1.4e-103 380.6 351 56.1
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 1.4e-103 380.6 313 59.7
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 5.3e-103 378.6 321 57.3
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 5.3e-103 378.6 325 58.5
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 6.9e-103 378.3 324 57.7
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 6.9e-103 378.3 331 56.5
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 9.1e-103 377.9 317 57.7
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 2.0e-102 376.7 314 57.0
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 3.4e-102 375.9 354 54.2
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 5.0e-101 372.1 350 54.3
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 8.5e-101 371.3 356 53.1
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 1.9e-100 370.2 323 57.0
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 5.5e-100 368.6 370 51.9
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 7.2e-100 368.2 353 53.5
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 1.2e-99 367.5 363 54.0
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 2.1e-99 366.7 362 53.9
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 7.9e-99 364.8 303 59.1
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 1.0e-98 364.4 311 56.6
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 1.0e-98 364.4 310 57.1
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 1.0e-98 364.4 357 52.7
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 1.4e-98 364.0 310 59.0
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 1.8e-98 363.6 354 52.0
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 6.7e-98 361.7 367 52.3
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 2.6e-97 359.8 349 52.4
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 2.6e-97 359.8 332 54.5
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 7.4e-97 358.2 306 58.8
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 2.8e-96 356.3 317 56.5
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 2.8e-96 356.3 338 53.8
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 4.8e-96 355.5 295 60.3
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 4.8e-96 355.5 352 50.6
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 1.1e-95 354.4 321 55.1
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 2.4e-95 353.2 306 57.2
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 2.4e-95 353.2 313 54.6
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 6.9e-95 351.7 294 57.5
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 1.5e-94 350.5 329 55.3
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 5.9e-94 348.6 357 51.5
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 7.7e-94 348.2 320 54.7
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 1.3e-93 347.4 372 49.7
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 1.7e-93 347.1 301 57.1
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 2.5e-92 343.2 306 58.2
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 2.5e-92 343.2 342 51.8
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 5.5e-92 342.0 299 57.2
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 7.2e-92 341.7 313 54.3
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 1.2e-91 340.9 301 54.5
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 1.6e-91 340.5 354 50.8
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 2.7e-91 339.7 300 54.0
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 2.7e-91 339.7 315 54.6
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 2.7e-91 339.7 328 51.5
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 1.0e-90 337.8 333 50.8
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 5.2e-90 335.5 308 55.2
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 5.2e-90 335.5 282 58.2
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 3.3e-89 332.8 302 54.0
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 3.3e-89 332.8 359 50.7
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 2.2e-88 330.1 308 54.2
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 3.7e-88 329.3 304 54.3
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 3.7e-88 329.3 314 53.5
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 1.8e-87 327.0 325 51.4
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 4.5e-86 322.4 341 51.0
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 2.9e-85 319.7 279 55.6
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 5.0e-85 318.9 303 52.8
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 1.1e-84 317.8 307 52.1
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 2.5e-84 316.6 302 52.3
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 2.7e-83 313.2 304 50.7
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 3.6e-83 312.8 285 52.6
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 8.0e-83 311.6 304 53.6
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.4e-82 310.8 302 50.7
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 4.4e-81 305.8 337 47.2
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 1.7e-80 303.9 304 52.0
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 4.8e-80 302.4 241 62.7
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 1.4e-79 300.8 247 58.7
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 5.3e-79 298.9 295 51.9
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 9.1e-79 298.1 306 49.7
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 1.2e-78 297.7 248 58.1
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 1.9e-76 290.4 331 46.8
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 6.8e-74 282.0 301 47.8
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 1.2e-73 281.2 391 40.7
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 1.6e-67 260.8 307 48.5
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 4.0e-66 256.1 341 42.2
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 4.3e-60 236.1 188 61.2
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 4.7e-59 232.6 311 42.8
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 1.5e-57 227.6 312 42.3
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 4.4e-57 226.1 296 42.2
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 1.7e-56 224.2 343 38.5
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 1.7e-53 214.2 219 50.2
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 1.9e-47 194.1 387 35.1
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 2.3e-45 187.2 286 38.8
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 2.5e-44 183.7 169 54.4
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 5.4e-39 166.0 394 31.0
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 9.2e-31 138.7 229 38.0
Actinidia22515 Actinidia chinensis HOM05D007079 ORTHO05D009006 2.5e-28 130.6 172 43.6
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 3.1e-26 123.6 330 29.7
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 4.0e-26 123.2 108 51.9
FAN20G1265 Fragaria x ananassa HOM05D007079 ORTHO05D009006 2.4e-23 114.0 129 45.7
Os01g0261500 Oryza sativa ssp. japonica HOM05D007079 ORTHO05D009006 1.0e-21 108.6 108 49.1
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 2.9e-16 90.5 118 42.4
CSS0043977 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 3.7e-11 73.6 63 54.0
COL.COLO4_19820 Corchorus olitorius HOM05D001041 ORTHO05D000846 6.0e-06 56.2 63 52.4


User provided reference genes

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