Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 1.8e-257 892.1 465 100.0
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 1.4e-156 557.0 493 66.1
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 1.5e-150 537.0 490 64.5
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 6.9e-140 501.5 494 61.9
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 1.2e-139 500.7 493 62.3
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 7.6e-139 498.0 494 61.9
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 1.9e-137 493.4 498 60.8
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 1.9e-137 493.4 492 62.0
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 3.0e-135 486.1 492 61.0
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 6.7e-135 485.0 493 60.4
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 1.2e-123 447.6 497 57.7
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 5.0e-114 415.6 520 52.5
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 3.8e-82 309.7 505 46.7
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 4.3e-73 279.6 509 43.4
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 7.5e-70 268.9 514 41.8
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 5.4e-68 262.7 487 42.7
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 7.0e-68 262.3 509 41.3
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 6.6e-66 255.8 494 38.5
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 5.6e-65 252.7 514 39.7
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 2.8e-64 250.4 493 38.3
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 2.8e-64 250.4 540 39.3
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 8.0e-64 248.8 497 38.4
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 4.0e-63 246.5 496 37.7
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 8.9e-63 245.4 491 39.3
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 3.7e-61 240.0 484 39.0
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.3e-61 238.8 531 36.9
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 1.1e-60 238.4 482 39.0
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 3.2e-60 236.9 520 37.5
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 4.1e-60 236.5 496 37.7
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 5.4e-60 236.1 483 39.5
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 9.2e-60 235.3 510 37.1
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 2.7e-59 233.8 502 36.9
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.0e-58 231.9 497 37.2
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 7.3e-57 225.7 551 35.6
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 3.6e-56 223.4 546 35.7
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 6.2e-56 222.6 338 47.6
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 1.1e-55 221.9 474 36.1
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 4.4e-54 216.5 514 38.3
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.4e-52 210.7 494 36.6
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 1.3e-50 204.9 410 38.0
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 1.5e-46 191.4 443 35.4
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 9.9e-46 188.7 400 36.8
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 3.8e-45 186.8 409 36.4
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 5.4e-44 183.0 401 36.7
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 3.5e-43 180.3 487 33.1
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 4.6e-43 179.9 403 36.5
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 2.3e-42 177.6 504 33.9
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 1.5e-41 174.9 494 33.6
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 3.3e-41 173.7 604 31.6
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 1.6e-40 171.4 348 37.6
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 3.6e-40 170.2 489 33.7
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 6.2e-40 169.5 493 33.5
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 1.1e-39 168.7 496 32.7
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 1.8e-39 167.9 510 33.7
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 3.1e-39 167.2 503 34.0
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 3.4e-38 163.7 346 35.8
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 4.4e-38 163.3 291 42.6
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 9.9e-38 162.2 475 33.7
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 3.8e-37 160.2 500 31.2
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 7.1e-36 156.0 472 31.8
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 1.3e-34 151.8 556 30.9
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 8.7e-34 149.1 517 32.3
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 1.5e-33 148.3 481 31.4
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 1.6e-32 144.8 333 36.6
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 1.6e-32 144.8 333 36.6
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 4.8e-32 143.3 391 34.3
BcaC05g25849 Brassica carinata HOM05D005512 ORTHO05D006716 3.1e-31 140.6 152 58.6
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 6.9e-31 139.4 332 38.0
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 6.9e-31 139.4 455 33.6
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 1.5e-30 138.3 466 32.4
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 9.9e-30 135.6 348 33.3
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 3.8e-29 133.7 496 31.0
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 1.1e-28 132.1 466 29.4
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 3.2e-28 130.6 378 31.5
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 1.2e-27 128.6 383 33.2
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 1.3e-26 125.2 346 34.7
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 3.9e-26 123.6 342 35.1
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 6.7e-26 122.9 370 33.0
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 1.1e-25 122.1 432 33.3
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 1.9e-25 121.3 245 38.8
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 4.3e-25 120.2 384 29.4
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 1.3e-24 118.6 473 29.4
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.1e-24 117.9 365 31.5
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 1.1e-23 115.5 516 27.7
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 2.4e-23 114.4 213 39.4
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 2.4e-23 114.4 465 28.4
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 6.9e-23 112.8 385 31.2
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 1.2e-22 112.1 449 30.3
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 5.8e-22 109.8 376 31.4
ATR0820G165 Amborella trichopoda HOM05D005512 ORTHO05D006716 7.6e-22 109.4 330 30.6
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 9.9e-22 109.0 244 36.9
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 1.7e-21 108.2 504 27.2
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 3.8e-21 107.1 321 33.6
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 4.9e-21 106.7 332 34.0
Psat3g034880 Pisum sativum HOM05D005512 ORTHO05D006716 1.4e-20 105.1 511 27.6
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 1.9e-20 104.8 353 30.9
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 4.2e-20 103.6 353 32.0
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 1.2e-19 102.1 327 28.7
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 1.6e-19 101.7 227 38.8
Eucgr.K02060 Eucalyptus grandis HOM05D005512 ORTHO05D006716 2.3e-18 97.8 312 29.5
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 9.6e-17 92.4 234 34.6
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 1.1e-15 89.0 475 28.0
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 4.0e-15 87.0 113 46.9
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 5.3e-15 86.7 126 44.4
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 1.2e-14 85.5 185 36.2
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 2.0e-14 84.7 360 30.8
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 2.0e-14 84.7 158 40.5
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 2.0e-14 84.7 177 39.0
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 2.2e-13 81.3 316 28.5
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 3.8e-13 80.5 113 45.1
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 4.9e-13 80.1 82 53.7
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 1.1e-12 79.0 385 27.0
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 1.9e-12 78.2 71 57.7
C07p23930 Brassica napus HOM05D005512 ORTHO05D006716 2.5e-12 77.8 77 58.4
BolC7t42915H Brassica oleracea HOM05D005512 ORTHO05D006716 2.5e-12 77.8 77 58.4
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 2.5e-12 77.8 368 28.5
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 7.1e-12 76.3 152 38.2
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 9.3e-12 75.9 317 29.7
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 1.8e-10 71.6 165 38.2
QL07p039646 Quercus lobata HOM05D005512 ORTHO05D006716 2.3e-10 71.2 291 26.1
BolC7t42914H Brassica oleracea HOM05D005512 ORTHO05D006716 3.9e-10 70.5 91 47.3
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 8.7e-10 69.3 190 33.7
unitig_22.g5122 Utricularia gibba HOM05D005512 ORTHO05D006716 2.5e-09 67.8 76 53.9
C07p23920 Brassica napus HOM05D005512 ORTHO05D006716 3.3e-09 67.4 90 50.0
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 2.8e-08 64.3 326 27.9
Atru.chr8.1591 Acer truncatum HOM05D005512 ORTHO05D006716 4.8e-08 63.5 46 71.7
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 6.3e-08 63.2 181 35.9
Ca_08983_v3 Cicer arietinum L. HOM05D005512 ORTHO05D006716 1.2e-06 58.9 173 31.2
SMO351G0354 Selaginella moellendorffii HOM05D005512 ORTHO05D006716 1.2e-06 58.9 93 41.9
CiPaw.11G098900 Carya illinoinensis HOM05D001459 ORTHO05D001359 1.5e-06 58.5 97 42.3
Mapoly0016s0098 Marchantia polymorpha HOM05D005512 ORTHO05D006716 1.5e-06 58.5 180 32.2
Zm00001eb303220 Zea mays HOM05D001459 ORTHO05D001359 1.0e-05 55.8 66 53.0


User provided reference genes

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