Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 1.3e-76 289.7 142 100.0
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 8.0e-31 137.5 140 58.6
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 2.3e-30 136.0 151 55.6
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 8.8e-30 134.0 142 54.9
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 1.5e-29 133.3 152 53.3
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 2.0e-29 132.9 138 55.8
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 3.3e-29 132.1 146 54.1
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 1.3e-28 130.2 154 52.6
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 5.3e-27 124.8 154 53.9
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 1.2e-26 123.6 144 52.8
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 2.0e-26 122.9 154 53.2
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 2.0e-26 122.9 154 53.2
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.0e-25 120.6 148 52.0
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 2.9e-25 119.0 160 51.2
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 4.2e-24 115.2 141 52.5
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 5.5e-24 114.8 144 53.5
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 2.5e-16 89.4 146 43.2
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 2.5e-16 89.4 150 41.3
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 2.5e-16 89.4 147 44.2
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 3.3e-16 89.0 150 41.3
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 3.3e-16 89.0 150 45.3
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 5.5e-16 88.2 142 43.7
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 5.5e-16 88.2 160 38.8
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 5.5e-16 88.2 129 46.5
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 7.2e-16 87.8 148 39.9
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 9.5e-16 87.4 150 44.7
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 1.6e-15 86.7 140 47.1
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 1.6e-15 86.7 166 39.8
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 2.8e-15 85.9 130 48.5
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 8.0e-15 84.3 150 43.3
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 1.0e-14 84.0 151 39.1
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 1.8e-14 83.2 142 45.1
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 3.0e-14 82.4 104 55.8
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 4.0e-14 82.0 168 39.9
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 8.9e-14 80.9 149 43.6
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 1.2e-13 80.5 164 42.7
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.5e-13 80.1 146 41.1
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 2.0e-13 79.7 143 42.0
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 2.0e-13 79.7 119 47.1
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 2.6e-13 79.3 144 41.7
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 7.5e-13 77.8 142 45.1
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 9.8e-13 77.4 118 48.3
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 9.8e-13 77.4 108 50.9
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 1.3e-12 77.0 102 50.0
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 1.7e-12 76.6 134 44.0
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.2e-12 76.3 128 44.5
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 2.8e-12 75.9 137 44.5
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 3.7e-12 75.5 118 44.9
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 4.9e-12 75.1 135 43.0
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 8.3e-12 74.3 135 45.9
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.1e-11 73.9 116 47.4
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.1e-11 73.9 118 44.9
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.4e-11 73.6 133 42.9
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 1.4e-11 73.6 50 72.0
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 1.8e-11 73.2 139 44.6
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 2.4e-11 72.8 124 46.0
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 2.4e-11 72.8 104 46.2
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 3.1e-11 72.4 138 40.6
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 3.1e-11 72.4 103 46.6
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 4.1e-11 72.0 141 38.3
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 5.4e-11 71.6 94 46.8
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 5.4e-11 71.6 120 45.8
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 5.4e-11 71.6 47 76.6
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 7.0e-11 71.2 106 45.3
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 9.2e-11 70.9 118 44.9
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 9.2e-11 70.9 148 37.8
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 1.6e-10 70.1 157 36.9
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 2.0e-10 69.7 173 38.7
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 2.7e-10 69.3 150 36.7
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.7e-10 69.3 70 58.6
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 4.5e-10 68.6 71 52.1
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 4.5e-10 68.6 142 39.4
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 4.5e-10 68.6 159 37.1
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 5.9e-10 68.2 47 76.6
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 7.8e-10 67.8 134 40.3
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 7.8e-10 67.8 93 44.1
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 7.8e-10 67.8 161 36.6
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 1.3e-09 67.0 154 37.7
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 1.3e-09 67.0 120 42.5
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 2.3e-09 66.2 131 43.5
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 2.9e-09 65.9 134 39.6
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 3.8e-09 65.5 147 36.7
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 5.0e-09 65.1 146 35.6
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 6.6e-09 64.7 153 38.6
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 6.6e-09 64.7 138 39.1
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 6.6e-09 64.7 131 40.5
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 8.6e-09 64.3 139 37.4
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 1.5e-08 63.5 136 38.2
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 1.5e-08 63.5 124 45.2
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 2.5e-08 62.8 74 50.0
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 4.3e-08 62.0 119 37.0
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 4.3e-08 62.0 116 40.5
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 1.6e-07 60.1 144 34.7
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 2.8e-07 59.3 123 43.1
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 2.8e-07 59.3 108 44.4
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 3.6e-07 58.9 65 55.4
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 4.7e-07 58.5 44 68.2
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 6.1e-07 58.2 135 37.0
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 6.1e-07 58.2 121 37.2
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 1.0e-06 57.4 120 37.5
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 1.0e-06 57.4 159 34.6
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 1.0e-06 57.4 117 39.3
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.0e-06 57.4 122 39.3
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 1.8e-06 56.6 49 67.3
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 1.8e-06 56.6 117 39.3
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 3.0e-06 55.8 151 36.4
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 3.0e-06 55.8 137 36.5
Lsat_1_v5_gn_4_162060 Lactuca sativa HOM05D006672 ORTHO05D007769 5.2e-06 55.1 44 70.5


User provided reference genes

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