Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G3790 Aethionema arabicum HOM05D002627 ORTHO05D002823 1.1e-90 337.0 231 100.0
AL1G31570 Arabidopsis lyrata HOM05D002627 ORTHO05D002823 4.5e-23 112.5 252 38.1
Thhalv10008269m.g Eutrema salsugineum HOM05D002627 ORTHO05D002823 7.6e-23 111.7 226 38.5
Sp1g16970 Schrenkiella parvula HOM05D002627 ORTHO05D002823 7.6e-23 111.7 244 36.9
BcaB03g12942 Brassica carinata HOM05D002627 ORTHO05D002823 2.9e-22 109.8 239 37.2
AT1G19010 Arabidopsis thaliana HOM05D002627 ORTHO05D002823 8.4e-22 108.2 243 38.3
BraA08t34941Z Brassica rapa HOM05D002627 ORTHO05D002823 2.5e-21 106.7 240 34.2
BolC8t49534H Brassica oleracea HOM05D002627 ORTHO05D002823 5.5e-21 105.5 238 35.7
BcaC07g38971 Brassica carinata HOM05D002627 ORTHO05D002823 2.1e-20 103.6 236 34.3
C08p19100 Brassica napus HOM05D002627 ORTHO05D002823 2.1e-20 103.6 236 34.3
A08p30060 Brassica napus HOM05D002627 ORTHO05D002823 4.6e-20 102.4 242 34.7
THA.LOC104809226 Tarenaya hassleriana HOM05D002627 ORTHO05D002823 2.5e-18 96.7 225 37.8
Carub.0001s1864 Capsella rubella HOM05D002627 ORTHO05D002823 9.6e-18 94.7 251 35.1
CARHR019630 Cardamine hirsuta HOM05D002627 ORTHO05D002823 2.8e-17 93.2 235 37.9
Aa31LG4G5070 Aethionema arabicum HOM05D002627 ORTHO05D002823 3.1e-16 89.7 224 33.9
AT1G74860 Arabidopsis thaliana HOM05D002627 ORTHO05D002823 2.6e-15 86.7 236 32.2
Carub.0002s2164 Capsella rubella HOM05D002627 ORTHO05D002823 1.1e-13 81.3 230 31.3
AL2G34740 Arabidopsis lyrata HOM05D002627 ORTHO05D002823 1.4e-13 80.9 236 31.4
Thhalv10019702m.g Eutrema salsugineum HOM05D002627 ORTHO05D002823 5.5e-13 79.0 236 32.2
CARHR068180 Cardamine hirsuta HOM05D002627 ORTHO05D002823 1.2e-12 77.8 66 63.6
Sp5g29990 Schrenkiella parvula HOM05D002627 ORTHO05D002823 2.7e-12 76.6 236 30.5
CiPaw.11G034000 Carya illinoinensis HOM05D002627 ORTHO05D002823 6.7e-11 72.0 65 61.5
Phvul.003G195900 Phaseolus vulgaris HOM05D002627 ORTHO05D002823 6.7e-11 72.0 65 58.5
arahy.Tifrunner.gnm1.ann1.AP0627 Arachis hypogaea HOM05D002627 ORTHO05D002823 8.7e-11 71.6 65 60.0
arahy.Tifrunner.gnm1.ann1.N6T05M Arachis hypogaea HOM05D002627 ORTHO05D002823 8.7e-11 71.6 66 59.1
Glyma.05G032400 Glycine max HOM05D002627 ORTHO05D002823 8.7e-11 71.6 65 58.5
Glyma.17G094200 Glycine max HOM05D002627 ORTHO05D002823 8.7e-11 71.6 65 60.0
Duzib205G0221 Durio zibethinus HOM05D002627 ORTHO05D002823 1.5e-10 70.9 65 58.5
Gohir.D03G089600 Gossypium hirsutum HOM05D002627 ORTHO05D002823 1.5e-10 70.9 65 58.5
Gorai.003G071800 Gossypium raimondii HOM05D002627 ORTHO05D002823 1.5e-10 70.9 65 58.5
Manes.06G099300 Manihot esculenta HOM05D002627 ORTHO05D002823 1.9e-10 70.5 65 56.9
Haze_07418 Corylus avellana HOM05D002627 ORTHO05D002823 2.5e-10 70.1 64 59.4
Gohir.D11G031000 Gossypium hirsutum HOM05D002627 ORTHO05D002823 2.5e-10 70.1 65 58.5
Gorai.007G033900 Gossypium raimondii HOM05D002627 ORTHO05D002823 2.5e-10 70.1 65 58.5
Ca_21874_v3 Cicer arietinum L. HOM05D002627 ORTHO05D002823 3.3e-10 69.7 66 56.1
Sc04g0002230 Simmondsia chinensis HOM05D002627 ORTHO05D002823 3.3e-10 69.7 65 58.5
A07p40500 Brassica napus HOM05D002627 ORTHO05D002823 4.3e-10 69.3 278 29.1
BolC6t39924H Brassica oleracea HOM05D002627 ORTHO05D002823 4.3e-10 69.3 281 29.2
Gohir.A03G076100 Gossypium hirsutum HOM05D002627 ORTHO05D002823 4.3e-10 69.3 65 56.9
Gohir.A11G028200 Gossypium hirsutum HOM05D002627 ORTHO05D002823 4.3e-10 69.3 65 58.5
TPR.G38438 Trifolium pratense HOM05D002627 ORTHO05D002823 4.3e-10 69.3 66 59.1
BcaC08g46911 Brassica carinata HOM05D002627 ORTHO05D002823 5.7e-10 68.9 279 28.7
Nn3g17059 Nelumbo nucifera HOM05D002627 ORTHO05D002823 5.7e-10 68.9 65 56.9
Hund02700 Selenicereus undatus HOM05D002627 ORTHO05D002823 5.7e-10 68.9 66 56.1
VMungo1215G0528 Vigna mungo HOM05D002627 ORTHO05D002823 5.7e-10 68.9 60 61.7
Duzib068G0784 Durio zibethinus HOM05D002627 ORTHO05D002823 7.4e-10 68.6 65 58.5
BcaC08g46910 Brassica carinata HOM05D002627 ORTHO05D002823 9.7e-10 68.2 65 55.4
BraA07t31594Z Brassica rapa HOM05D002627 ORTHO05D002823 9.7e-10 68.2 274 29.2
GSVIVG01007845001 Vitis vinifera HOM05D002627 ORTHO05D002823 9.7e-10 68.2 65 56.9
MSTRG.23077 Avicennia marina HOM05D002627 ORTHO05D002823 1.6e-09 67.4 65 60.0
Ciclev10019847m.g Citrus clementina HOM05D002627 ORTHO05D002823 1.6e-09 67.4 65 56.9
Lalb_Chr13g0298031 Lupinus albus HOM05D002627 ORTHO05D002823 1.6e-09 67.4 66 57.6
Manes.15G177600 Manihot esculenta HOM05D002627 ORTHO05D002823 1.6e-09 67.4 65 58.5
Nn4g22965 Nelumbo nucifera HOM05D002627 ORTHO05D002823 1.6e-09 67.4 65 56.9
Psat7g131040 Pisum sativum HOM05D002627 ORTHO05D002823 1.6e-09 67.4 66 54.5
Lalb_Chr12g0201291 Lupinus albus HOM05D002627 ORTHO05D002823 2.2e-09 67.0 66 56.1
Medtr4g107200 Medicago truncatula HOM05D002627 ORTHO05D002823 2.2e-09 67.0 66 53.0
QL10p013948 Quercus lobata HOM05D002627 ORTHO05D002823 2.2e-09 67.0 65 55.4
PGR083G1411 Punica granatum HOM05D002627 ORTHO05D002823 2.8e-09 66.6 64 56.2
Lj2g0010034 Lotus japonicus HOM05D002627 ORTHO05D002823 3.7e-09 66.2 62 59.7
RcHm_v2.0_Chr7g0179941 Rosa chinensis HOM05D002627 ORTHO05D002823 3.7e-09 66.2 65 60.0
Atru.chr9.2380 Acer truncatum HOM05D002627 ORTHO05D002823 4.8e-09 65.9 64 57.8
C06p48880 Brassica napus HOM05D002627 ORTHO05D002823 6.3e-09 65.5 277 28.9
FvH4_5g16190 Fragaria vesca HOM05D002627 ORTHO05D002823 8.2e-09 65.1 65 56.9
FAN04G2684 Fragaria x ananassa HOM05D002627 ORTHO05D002823 8.2e-09 65.1 65 56.9
MD14G1189100 Malus domestica HOM05D002627 ORTHO05D002823 8.2e-09 65.1 64 54.7
PSO591G0190 Papaver somniferum HOM05D002627 ORTHO05D002823 8.2e-09 65.1 65 55.4
THA.LOC104805426 Tarenaya hassleriana HOM05D002627 ORTHO05D002823 1.1e-08 64.7 64 56.2
FAN08G1526 Fragaria x ananassa HOM05D002627 ORTHO05D002823 1.8e-08 63.9 65 55.4
ClCG01G014180 Citrullus lanatus HOM05D002627 ORTHO05D002823 2.4e-08 63.5 65 55.4
Cc04_g16140 Coffea canephora HOM05D002627 ORTHO05D002823 2.4e-08 63.5 65 55.4
Dinv13122 Davidia involucrata HOM05D002627 ORTHO05D002823 2.4e-08 63.5 65 53.8
Sed0003853 Sechium edule HOM05D002627 ORTHO05D002823 2.4e-08 63.5 66 57.6
Sed0022597 Sechium edule HOM05D002627 ORTHO05D002823 2.4e-08 63.5 66 57.6
Ah.02g112860 Amaranthus hybridus HOM05D002627 ORTHO05D002823 3.1e-08 63.2 65 50.8
Lj9C455G16 Lonicera japonica HOM05D002627 ORTHO05D002823 3.1e-08 63.2 65 52.3
PSO832G0166 Papaver somniferum HOM05D002627 ORTHO05D002823 3.1e-08 63.2 65 53.8
EL10Ac5g10867 Beta vulgaris HOM05D002627 ORTHO05D002823 4.1e-08 62.8 65 52.3
CANSAT80G1418 Cannabis sativa HOM05D002627 ORTHO05D002823 4.1e-08 62.8 65 52.3
TAR371G0654 Trochodendron aralioides HOM05D002627 ORTHO05D002823 4.1e-08 62.8 65 52.3
Aqoxy3G03169 Aquilegia oxysepala HOM05D002627 ORTHO05D002823 5.3e-08 62.4 63 50.8
TAR374G0258 Trochodendron aralioides HOM05D002627 ORTHO05D002823 5.3e-08 62.4 65 50.8
MELO3C002230.2 Cucumis melo HOM05D002627 ORTHO05D002823 6.9e-08 62.0 65 53.8
CsaV3_1G008130 Cucumis sativus L. HOM05D002627 ORTHO05D002823 6.9e-08 62.0 65 53.8
Glyma.18G155150 Glycine max HOM05D002627 ORTHO05D002823 6.9e-08 62.0 55 60.0
TWI56G0357 Tripterygium wilfordii HOM05D002627 ORTHO05D002823 6.9e-08 62.0 64 53.1
CiPaw.03G032500 Carya illinoinensis HOM05D002627 ORTHO05D002823 9.0e-08 61.6 63 55.6
ClCG09G018540 Citrullus lanatus HOM05D002627 ORTHO05D002823 9.0e-08 61.6 63 55.6
FAN18G0871 Fragaria x ananassa HOM05D002627 ORTHO05D002823 9.0e-08 61.6 61 57.4
PSO161G0001 Papaver somniferum HOM05D002627 ORTHO05D002823 9.0e-08 61.6 65 52.3
TWI12G1193 Tripterygium wilfordii HOM05D002627 ORTHO05D002823 9.0e-08 61.6 64 53.1
Cpa.g.sc14.65 Carica papaya HOM05D002627 ORTHO05D002823 1.2e-07 61.2 64 56.2
Actinidia37686 Actinidia chinensis HOM05D002627 ORTHO05D002823 1.5e-07 60.8 65 50.8
CSS0010077 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 1.5e-07 60.8 64 51.6
Migut.I00077 Erythranthe guttata HOM05D002627 ORTHO05D002823 1.5e-07 60.8 64 53.1
Prupe.5G181800 Prunus persica HOM05D002627 ORTHO05D002823 1.5e-07 60.8 65 55.4
Sp2g17200 Schrenkiella parvula HOM05D002627 ORTHO05D002823 1.5e-07 60.8 64 51.6
Sed0010058 Sechium edule HOM05D002627 ORTHO05D002823 1.5e-07 60.8 65 52.3
vmacro16579 Vaccinium macrocarpon HOM05D002627 ORTHO05D002823 1.5e-07 60.8 65 50.8
AUR62008304 Chenopodium quinoa HOM05D002627 ORTHO05D002823 2.0e-07 60.5 64 51.6
Haze_14609 Corylus avellana HOM05D001839 ORTHO05D001867 2.0e-07 60.5 56 60.7
Lj4g0005532 Lotus japonicus HOM05D002627 ORTHO05D002823 2.0e-07 60.5 66 48.5
Nitab4.5_0000642g0200 Nicotiana tabacum HOM05D002627 ORTHO05D002823 2.0e-07 60.5 65 53.8
Nitab4.5_0002875g0040 Nicotiana tabacum HOM05D002627 ORTHO05D002823 2.0e-07 60.5 65 53.8
vmacro19345 Vaccinium macrocarpon HOM05D002627 ORTHO05D002823 2.0e-07 60.5 65 50.8
Aa31LG2G4640 Aethionema arabicum HOM05D002627 ORTHO05D002823 2.6e-07 60.1 64 50.0
Cpa.g.sc35.14 Carica papaya HOM05D002627 ORTHO05D002823 2.6e-07 60.1 57 61.4
Migut.H00873 Erythranthe guttata HOM05D002627 ORTHO05D002823 2.6e-07 60.1 66 48.5
FAN13G1829 Fragaria x ananassa HOM05D002627 ORTHO05D002823 2.6e-07 60.1 61 55.7
PSO478G0854 Papaver somniferum HOM05D002627 ORTHO05D002823 2.6e-07 60.1 65 50.8
SalBow1G1965 Salvia bowleyana HOM05D002627 ORTHO05D002823 2.6e-07 60.1 66 50.0
AUR62021791 Chenopodium quinoa HOM05D002627 ORTHO05D002823 3.4e-07 59.7 64 51.6
AUR62021794 Chenopodium quinoa HOM05D002627 ORTHO05D002823 3.4e-07 59.7 64 51.6
Eucgr.J02157 Eucalyptus grandis HOM05D002627 ORTHO05D002823 3.4e-07 59.7 65 53.8
Lsat_1_v5_gn_4_74501 Lactuca sativa HOM05D002627 ORTHO05D002823 3.4e-07 59.7 64 51.6
Potri.017G074300 Populus trichocarpa HOM05D002627 ORTHO05D002823 3.4e-07 59.7 64 53.1
Rhsim12G0160600 Rhododendron simsii HOM05D002627 ORTHO05D002823 3.4e-07 59.7 60 53.3
PGSC0003DMG400001402 Solanum tuberosum HOM05D002627 ORTHO05D002823 3.4e-07 59.7 56 62.5
Oeu038970.1 Olea europaea HOM05D002627 ORTHO05D002823 4.5e-07 59.3 66 50.0
RcHm_v2.0_Chr2g0169731 Rosa chinensis HOM05D002627 ORTHO05D002823 4.5e-07 59.3 62 51.6
CiPaw.04G021400 Carya illinoinensis HOM05D002627 ORTHO05D002823 5.9e-07 58.9 62 53.2
CDE06G2464 Ceratophyllum demersum HOM05D002627 ORTHO05D002823 5.9e-07 58.9 64 53.1
Cc07_g02820 Coffea canephora HOM05D002627 ORTHO05D002823 5.9e-07 58.9 64 53.1
Potri.001G350000 Populus trichocarpa HOM05D002627 ORTHO05D002823 5.9e-07 58.9 64 54.7
Sabra16G0229400 Salix brachista HOM05D002627 ORTHO05D002823 5.9e-07 58.9 64 54.7
Dinv33687 Davidia involucrata HOM05D002627 ORTHO05D002823 7.7e-07 58.5 60 53.3
SGA_v2.0_scaffold56G20087 Striga asiatica HOM05D002627 ORTHO05D002823 1.0e-06 58.2 64 51.6
Thecc.04G069700 Theobroma cacao HOM05D002627 ORTHO05D002823 1.0e-06 58.2 64 53.1
Lj2g0016402 Lotus japonicus HOM05D002627 ORTHO05D002823 1.3e-06 57.8 56 58.9
CDE02G3017 Ceratophyllum demersum HOM05D002627 ORTHO05D002823 1.7e-06 57.4 64 51.6
MD06G1183100 Malus domestica HOM05D002627 ORTHO05D002823 1.7e-06 57.4 65 50.8
SGA_v2.0_scaffold25G10857 Striga asiatica HOM05D002627 ORTHO05D002823 1.7e-06 57.4 62 53.2
CsaV3_5G037690 Cucumis sativus L. HOM05D002627 ORTHO05D002823 2.2e-06 57.0 63 52.4
Lj5A119G36 Lonicera japonica HOM05D002627 ORTHO05D002823 2.2e-06 57.0 60 53.3
Sopen03g032720 Solanum pennellii HOM05D002627 ORTHO05D002823 2.2e-06 57.0 65 50.8
PGSC0003DMG400024465 Solanum tuberosum HOM05D002627 ORTHO05D002823 2.2e-06 57.0 65 50.8
SGA_v2.0_scaffold135G34799 Striga asiatica HOM05D002627 ORTHO05D002823 2.2e-06 57.0 66 48.5
AUR62030558 Chenopodium quinoa HOM05D002627 ORTHO05D002823 2.9e-06 56.6 60 51.7
Nitab4.5_0002265g0070 Nicotiana tabacum HOM05D002627 ORTHO05D002823 2.9e-06 56.6 56 60.7
Oeu018663.2 Olea europaea HOM05D002627 ORTHO05D002823 2.9e-06 56.6 64 50.0
Rhsim08G0164100 Rhododendron simsii HOM05D002627 ORTHO05D002823 2.9e-06 56.6 59 52.5
Solyc02g087450.3 Solanum lycopersicum HOM05D002627 ORTHO05D002823 2.9e-06 56.6 55 60.0
Ciclev10011309m.g Citrus clementina HOM05D002627 ORTHO05D002823 3.8e-06 56.2 66 47.0
COL.COLO4_22897 Corchorus olitorius HOM05D002627 ORTHO05D002823 3.8e-06 56.2 54 57.4
Peaxi162Scf00129g00637 Petunia axillaris HOM05D002627 ORTHO05D002823 3.8e-06 56.2 60 53.3
TAR629G2000 Trochodendron aralioides HOM05D002627 ORTHO05D002823 3.8e-06 56.2 60 50.0
BcaC06g33739 Brassica carinata HOM05D002627 ORTHO05D002823 5.0e-06 55.8 64 48.4
MELO3C021486.2 Cucumis melo HOM05D002627 ORTHO05D002823 5.0e-06 55.8 63 50.8
Thhalv10005462m.g Eutrema salsugineum HOM05D002627 ORTHO05D002823 5.0e-06 55.8 59 50.8
Duzib147G1604 Durio zibethinus HOM05D002627 ORTHO05D002823 6.5e-06 55.5 64 50.0
Migut.D01893 Erythranthe guttata HOM05D002627 ORTHO05D002823 6.5e-06 55.5 65 46.2
Eucgr.K02895 Eucalyptus grandis HOM05D002627 ORTHO05D002823 6.5e-06 55.5 65 49.2
GSVIVG01032571001 Vitis vinifera HOM05D002627 ORTHO05D002823 6.5e-06 55.5 56 53.6
CARHR292550 Cardamine hirsuta HOM05D002627 ORTHO05D002823 8.5e-06 55.1 60 48.3
FvH4_6g49700 Fragaria vesca HOM05D002627 ORTHO05D002823 8.5e-06 55.1 60 48.3
Glyma.19G017100 Glycine max HOM05D002627 ORTHO05D002823 8.5e-06 55.1 59 50.8
Peaxi162Scf00017g02214 Petunia axillaris HOM05D002627 ORTHO05D002823 8.5e-06 55.1 60 51.7
SGA_v2.0_scaffold114G31862 Striga asiatica HOM05D002627 ORTHO05D002823 8.5e-06 55.1 65 47.7
THA.LOC104822818 Tarenaya hassleriana HOM05D002627 ORTHO05D002823 8.5e-06 55.1 59 52.5
unitig_21.g20455 Utricularia gibba HOM05D002627 ORTHO05D010027 8.5e-06 55.1 62 50.0


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