Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 2.4e-218 761.9 394 100.0
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 1.5e-156 556.6 394 72.6
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 3.4e-156 555.4 400 71.8
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 6.4e-155 551.2 400 71.2
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 2.4e-154 549.3 396 72.5
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 3.6e-150 535.4 416 66.8
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 1.2e-148 530.4 422 66.1
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 9.9e-148 527.3 395 69.4
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 8.4e-147 524.2 396 67.9
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 1.1e-146 523.9 395 68.9
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 1.6e-142 510.0 422 64.2
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 1.6e-142 510.0 422 64.2
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 4.8e-142 508.4 422 64.0
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 8.2e-134 481.1 418 62.4
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 2.5e-127 459.5 392 60.2
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 7.4e-127 458.0 392 61.0
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 1.8e-120 436.8 390 56.7
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 7.4e-119 431.4 395 55.9
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 1.8e-117 426.8 390 55.9
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 1.8e-117 426.8 389 57.1
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 5.3e-117 425.2 388 56.4
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 5.3e-117 425.2 388 56.7
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 1.2e-116 424.1 395 55.2
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 5.9e-116 421.8 390 54.1
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 1.7e-115 420.2 390 55.9
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 2.2e-115 419.9 386 57.0
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 2.9e-115 419.5 389 56.3
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 1.9e-114 416.8 388 55.7
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 4.2e-114 415.6 392 53.8
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 1.4e-112 410.6 389 52.7
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.4e-112 410.6 392 53.8
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 5.1e-112 408.7 389 54.5
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.0e-111 406.8 390 52.8
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 9.7e-111 404.4 376 55.6
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.8e-110 402.9 390 52.6
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 3.7e-110 402.5 390 52.1
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 1.4e-109 400.6 389 53.0
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 1.4e-109 400.6 390 52.6
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 4.1e-109 399.1 393 53.2
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 6.9e-109 398.3 392 53.1
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 1.5e-108 397.1 389 51.9
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.0e-108 396.7 390 52.1
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 3.4e-108 396.0 389 53.0
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 4.5e-108 395.6 389 53.0
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 1.0e-107 394.4 393 52.9
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 2.9e-107 392.9 389 52.2
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 2.9e-107 392.9 389 52.2
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 1.1e-106 391.0 393 52.9
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 1.1e-106 391.0 390 52.1
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 1.9e-106 390.2 354 57.3
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 9.4e-106 387.9 393 52.4
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 1.6e-105 387.1 395 50.4
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 3.6e-105 386.0 393 50.9
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 6.1e-105 385.2 392 50.3
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 8.0e-105 384.8 395 49.6
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 3.9e-104 382.5 395 49.6
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 5.2e-104 382.1 390 49.5
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 5.2e-104 382.1 394 50.5
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 1.1e-103 380.9 390 49.2
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 4.4e-103 379.0 389 50.6
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 5.7e-103 378.6 390 49.0
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 7.4e-103 378.3 389 49.9
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 1.7e-102 377.1 392 50.8
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 2.2e-102 376.7 391 52.2
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 8.2e-102 374.8 391 49.1
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 2.4e-101 373.2 390 47.9
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 2.0e-100 370.2 388 49.0
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 5.9e-100 368.6 394 49.0
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 1.7e-99 367.1 379 51.5
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 1.7e-99 367.1 390 47.4
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 8.5e-99 364.8 390 49.2
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 3.2e-98 362.8 394 48.5
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 2.1e-97 360.1 390 47.2
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 6.1e-97 358.6 388 49.7
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 1.4e-96 357.5 390 46.7
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 8.8e-96 354.8 396 47.7
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 1.2e-95 354.4 395 46.1
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 1.5e-95 354.0 389 48.6
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 2.6e-95 353.2 390 47.7
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 2.8e-94 349.7 389 46.8
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 8.2e-94 348.2 391 47.6
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 2.2e-91 340.1 391 45.8
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 2.9e-91 339.7 389 45.5
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 1.9e-90 337.0 388 45.4
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 2.5e-90 336.7 389 45.5
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 7.2e-90 335.1 397 46.6
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 8.0e-89 331.6 397 47.4
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 2.0e-87 327.0 390 44.1
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 9.8e-87 324.7 393 44.5
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 1.7e-86 323.9 397 44.8
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 2.2e-86 323.6 266 69.5
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 2.2e-86 323.6 397 44.3
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 5.4e-85 318.9 388 44.1
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 9.1e-85 318.2 393 43.0
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 4.5e-84 315.8 397 43.3
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 7.7e-84 315.1 403 42.7
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 2.9e-83 313.2 391 43.0
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 1.1e-82 311.2 389 42.2
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 1.2e-81 307.8 396 43.7
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 6.8e-80 302.0 394 40.6
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 8.9e-80 301.6 392 41.6
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 5.4e-77 292.4 391 40.4
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.7e-76 290.0 268 54.5
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.1e-74 284.6 392 40.1
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 7.3e-74 282.0 389 42.2
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 4.0e-72 276.2 260 53.5
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 4.0e-72 276.2 312 49.7
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 2.0e-71 273.9 373 39.1
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 4.4e-71 272.7 390 39.2
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 2.2e-70 270.4 310 46.8
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 2.3e-67 260.4 327 42.5
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 3.6e-57 226.5 423 35.9
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 3.6e-57 226.5 311 42.8
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 4.7e-57 226.1 176 63.1
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 9.9e-47 191.8 394 36.8
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 2.8e-41 173.7 244 38.5
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 1.4e-37 161.4 260 35.4
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 4.2e-37 159.8 233 38.2
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 1.3e-33 148.3 186 47.3
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 1.1e-26 125.2 403 27.0
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 3.2e-21 107.1 330 26.7
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 4.6e-20 103.2 308 26.3
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.8e-19 101.3 367 24.8
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.8e-19 101.3 367 24.8
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 5.6e-18 96.3 176 38.1
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.2e-15 88.6 432 24.5
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 2.0e-15 87.8 184 39.7
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 9.3e-13 79.0 104 37.5
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 2.7e-12 77.4 272 24.6
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 6.3e-09 66.2 276 26.8
AagrBONN_evm.TU.Sc2ySwM_362.2581 Anthoceros agrestis HOM05D002504 ORTHO05D007555 5.0e-06 56.6 198 27.8


User provided reference genes

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