Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 3.8e-174 614.8 315 100.0
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 2.4e-120 436.0 307 74.3
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 8.6e-118 427.6 305 73.1
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 2.5e-117 426.0 301 73.4
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 4.2e-117 425.2 302 72.2
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 9.5e-117 424.1 301 72.8
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 4.7e-116 421.8 302 71.2
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 6.8e-115 417.9 304 71.4
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 1.5e-114 416.8 301 70.8
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 2.0e-114 416.4 313 70.3
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 2.5e-109 399.4 336 64.9
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 2.3e-99 366.3 296 64.2
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 8.9e-99 364.4 307 61.6
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.2e-98 364.0 307 62.2
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 2.6e-98 362.8 291 63.6
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 7.5e-98 361.3 300 61.3
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 7.5e-98 361.3 315 61.9
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 2.2e-97 359.8 327 61.5
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 3.7e-97 359.0 300 59.7
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 4.9e-97 358.6 291 63.6
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 1.1e-96 357.5 244 75.4
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.1e-96 357.5 303 61.4
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.1e-96 357.5 303 61.4
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 5.4e-96 355.1 301 61.5
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 9.2e-96 354.4 303 58.7
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 1.2e-95 354.0 301 60.1
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 1.2e-95 354.0 299 61.2
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 2.0e-95 353.2 299 60.2
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 2.7e-95 352.8 299 60.2
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 1.3e-94 350.5 249 73.1
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 2.3e-94 349.7 281 63.3
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 2.3e-94 349.7 311 59.8
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 2.3e-94 349.7 304 60.9
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 2.3e-94 349.7 261 67.0
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 3.0e-94 349.4 301 60.1
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.9e-94 349.0 305 59.3
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 5.0e-94 348.6 298 59.1
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 5.0e-94 348.6 306 59.5
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 6.6e-94 348.2 301 59.8
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.5e-93 347.1 296 60.5
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 1.9e-93 346.7 297 59.9
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 3.3e-93 345.9 291 61.2
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 7.3e-93 344.7 299 57.5
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 7.3e-93 344.7 309 58.3
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 9.5e-93 344.4 291 61.2
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 2.1e-92 343.2 261 65.5
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.1e-92 343.2 296 59.8
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 2.1e-92 343.2 304 58.2
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 2.1e-92 343.2 299 59.9
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 2.8e-92 342.8 278 61.9
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 3.6e-92 342.4 307 58.6
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 4.7e-92 342.0 302 58.6
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 6.2e-92 341.7 312 56.1
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 6.2e-92 341.7 294 60.2
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 1.4e-91 340.5 261 66.3
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 3.1e-91 339.3 256 71.1
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 3.1e-91 339.3 299 60.2
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 3.1e-91 339.3 298 57.4
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 8.9e-91 337.8 304 56.2
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 8.9e-91 337.8 277 62.8
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 1.2e-90 337.4 309 57.6
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 4.4e-90 335.5 253 66.4
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 4.4e-90 335.5 258 64.0
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 4.4e-90 335.5 258 64.3
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 2.2e-89 333.2 301 57.1
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 8.3e-89 331.3 254 65.0
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 1.9e-88 330.1 253 64.8
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 1.9e-88 330.1 247 71.3
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 1.9e-88 330.1 312 56.1
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 2.4e-88 329.7 304 57.2
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 2.4e-88 329.7 310 56.5
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 5.4e-88 328.6 301 56.8
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 5.4e-88 328.6 297 57.9
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 7.1e-88 328.2 290 60.0
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 3.5e-87 325.9 282 56.7
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 7.8e-87 324.7 292 59.2
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 7.8e-87 324.7 261 63.6
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 7.8e-87 324.7 337 54.3
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 1.7e-86 323.6 303 57.1
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 3.0e-86 322.8 293 56.3
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 3.0e-86 322.8 305 57.0
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 5.1e-86 322.0 300 57.0
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 6.6e-86 321.6 307 58.3
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 8.6e-86 321.2 291 55.7
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 8.6e-86 321.2 259 63.3
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 9.5e-85 317.8 268 59.7
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 3.6e-84 315.8 254 61.4
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 3.6e-84 315.8 304 56.9
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 2.4e-83 313.2 303 55.1
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 1.2e-82 310.8 325 52.3
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 4.4e-82 308.9 279 56.6
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 7.6e-82 308.1 292 54.5
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 9.2e-80 301.2 289 54.0
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 6.0e-79 298.5 245 60.8
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 6.6e-78 295.0 282 56.0
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 8.7e-78 294.7 263 59.7
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 1.6e-76 290.4 259 55.6
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 3.6e-76 289.3 309 52.8
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 4.2e-72 275.8 309 47.6
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 2.3e-70 270.0 311 49.2
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 8.1e-68 261.5 255 52.2
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 3.4e-66 256.1 205 63.9
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 1.5e-61 240.7 190 60.5
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 8.1e-60 235.0 364 42.3
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 6.9e-59 231.9 253 49.8
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 7.1e-56 221.9 266 45.1
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 1.6e-55 220.7 258 47.3
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 5.1e-54 215.7 174 60.9
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 4.0e-51 206.1 265 41.5
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 1.3e-49 201.1 160 63.8
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.9e-49 199.1 146 65.1
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.9e-48 197.2 162 61.7
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 7.2e-40 168.7 155 59.4
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 2.7e-39 166.8 177 50.3
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.0e-29 134.0 155 48.4
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 3.3e-29 133.3 274 30.7
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 8.2e-28 128.6 144 45.8
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 2.9e-25 120.2 127 54.3
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 3.2e-24 116.7 203 34.5
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 5.5e-24 115.9 104 58.7
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 5.5e-24 115.9 157 47.1
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.5e-21 107.8 163 42.3
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 1.3e-20 104.8 248 33.1
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 6.3e-20 102.4 167 39.5
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 5.3e-19 99.4 78 57.7
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.2e-18 98.2 79 62.0
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 1.7e-17 94.4 152 42.8
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 3.2e-16 90.1 69 60.9
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 1.2e-15 88.2 68 60.3
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 5.2e-06 56.2 92 43.5


User provided reference genes

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