Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G290 Aethionema arabicum HOM05D004831 ORTHO05D003975 6.6e-108 394.0 198 100.0
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.8e-65 253.1 158 82.3
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 3.4e-56 222.2 158 74.7
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 6.3e-50 201.4 160 69.4
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 1.8e-44 183.3 160 63.1
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 7.4e-43 177.9 163 62.6
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 1.0e-39 167.5 173 54.9
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 8.5e-39 164.5 174 55.2
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 1.6e-37 160.2 159 58.5
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 8.8e-36 154.5 159 56.6
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 1.1e-35 154.1 177 54.2
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 1.5e-35 153.7 158 56.3
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 3.3e-35 152.5 157 56.7
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 9.7e-35 151.0 177 53.7
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 6.3e-34 148.3 153 54.9
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 8.2e-26 121.3 176 43.8
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.7e-24 116.3 148 45.3
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 4.5e-24 115.5 148 45.9
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 5.9e-24 115.2 148 48.6
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 7.7e-24 114.8 148 45.9
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 6.5e-23 111.7 144 47.2
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 5.5e-22 108.6 171 39.2
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 5.5e-22 108.6 158 44.3
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 1.8e-20 103.6 145 43.4
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 6.8e-20 101.7 164 37.2
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 2.0e-19 100.1 172 40.7
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 4.4e-19 99.0 164 40.2
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 5.7e-19 98.6 150 43.3
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 7.5e-19 98.2 146 41.8
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 1.7e-18 97.1 182 37.4
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 2.8e-18 96.3 161 41.6
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 2.8e-18 96.3 146 41.1
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.8e-18 96.3 145 40.0
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.8e-18 96.3 145 40.0
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 4.8e-18 95.5 169 35.5
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 6.3e-18 95.1 139 42.4
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 1.1e-17 94.4 148 41.2
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 5.4e-17 92.0 175 37.1
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 7.0e-17 91.7 145 37.9
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 7.0e-17 91.7 145 38.6
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 7.0e-17 91.7 177 36.7
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 1.2e-16 90.9 152 38.8
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 3.5e-16 89.4 145 37.2
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 4.5e-16 89.0 151 37.7
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 4.5e-16 89.0 145 37.9
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 1.0e-15 87.8 145 37.9
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 1.0e-15 87.8 163 36.8
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 1.3e-15 87.4 141 38.3
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 2.2e-15 86.7 127 45.7
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 2.2e-15 86.7 145 37.9
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 8.5e-15 84.7 178 32.6
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 3.2e-14 82.8 146 34.2
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 3.2e-14 82.8 140 35.7
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 7.2e-14 81.6 181 31.5
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 1.2e-13 80.9 105 44.8
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 2.1e-13 80.1 147 34.7
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 2.1e-13 80.1 148 35.8
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 2.7e-13 79.7 139 37.4
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 6.1e-13 78.6 146 34.9
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 6.1e-13 78.6 145 35.9
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 8.0e-13 78.2 142 36.6
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 1.8e-12 77.0 113 43.4
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 3.0e-12 76.3 143 35.0
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 5.2e-12 75.5 147 36.7
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 8.8e-12 74.7 128 38.3
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 1.2e-11 74.3 154 33.8
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 1.2e-11 74.3 153 35.9
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.5e-11 73.9 134 33.6
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 4.4e-11 72.4 147 34.0
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 7.5e-11 71.6 153 35.3
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 7.5e-11 71.6 153 35.3
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 7.5e-11 71.6 143 34.3
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 9.8e-11 71.2 169 36.1
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 1.7e-10 70.5 151 33.1
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 2.2e-10 70.1 153 36.6
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 3.7e-10 69.3 198 29.8
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 4.9e-10 68.9 151 33.8
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 8.3e-10 68.2 152 35.5
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 8.3e-10 68.2 138 35.5
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 1.1e-09 67.8 143 32.9
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 2.4e-09 66.6 148 34.5
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 2.4e-09 66.6 133 35.3
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 4.1e-09 65.9 144 31.9
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 5.4e-09 65.5 150 34.7
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 9.2e-09 64.7 157 32.5
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 9.2e-09 64.7 157 32.5
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 3.5e-08 62.8 148 33.8
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 1.0e-07 61.2 116 35.3
Haze_16456 Corylus avellana HOM05D004831 ORTHO05D003975 1.3e-07 60.8 110 39.1
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 1.3e-07 60.8 157 29.9
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.3e-07 60.1 69 49.3
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.3e-07 60.1 69 49.3
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 2.3e-07 60.1 132 32.6
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 2.9e-07 59.7 136 33.1
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 3.8e-07 59.3 154 33.8
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 6.6e-07 58.5 69 47.8
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 1.1e-06 57.8 148 33.1
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.5e-06 57.4 154 33.8
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 3.3e-06 56.2 174 29.9
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 3.3e-06 56.2 145 35.2
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 4.3e-06 55.8 148 32.4
Cpa.g.sc10.163 Carica papaya HOM05D004831 ORTHO05D003975 7.3e-06 55.1 55 58.2


User provided reference genes

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