Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G2600 Aethionema arabicum HOM05D009038 ORTHO05D010897 5.1e-181 637.9 383 100.0
Sp1g15860 Schrenkiella parvula HOM05D009038 ORTHO05D010897 8.4e-43 178.7 402 37.6
CARHR018390 Cardamine hirsuta HOM05D009038 ORTHO05D010897 4.9e-35 152.9 385 35.8
AL1G30140 Arabidopsis lyrata HOM05D009038 ORTHO05D010897 2.5e-34 150.6 393 34.9
Carub.0001s1751 Capsella rubella HOM05D009038 ORTHO05D010897 2.1e-33 147.5 390 36.2
AT1G17780 Arabidopsis thaliana HOM05D009038 ORTHO05D010897 3.9e-32 143.3 297 38.4
BraA08t35004Z Brassica rapa HOM05D009038 ORTHO05D010897 5.3e-29 132.9 385 34.0
A08p30740 Brassica napus HOM05D009038 ORTHO05D010897 3.4e-28 130.2 386 34.2
BcaC07g38888 Brassica carinata HOM05D009038 ORTHO05D010897 2.5e-26 124.0 257 40.1
C08p18180 Brassica napus HOM05D009038 ORTHO05D010897 9.3e-26 122.1 256 39.8
BolC8t49453H Brassica oleracea HOM05D009038 ORTHO05D010897 9.3e-26 122.1 256 39.8
AT2G16575 Arabidopsis thaliana HOM05D009038 ORTHO05D010897 5.7e-23 112.8 191 42.9
Sp5g28090 Schrenkiella parvula HOM05D009038 ORTHO05D010897 1.6e-22 111.3 385 30.1
Thhalv10018751m.g Eutrema salsugineum HOM05D009038 ORTHO05D010897 1.0e-19 102.1 392 29.6
THA.LOC104812203 Tarenaya hassleriana HOM05D009038 ORTHO05D010897 2.2e-19 100.9 408 28.7
CARHR066100 Cardamine hirsuta HOM05D009038 ORTHO05D010897 3.0e-16 90.5 86 55.8
Carub.0002s1990 Capsella rubella HOM05D009038 ORTHO05D010897 2.0e-15 87.8 80 57.5
THA.LOC104823260 Tarenaya hassleriana HOM05D009038 ORTHO05D010897 9.7e-15 85.5 350 30.0
Aa31LG4G3400 Aethionema arabicum HOM05D009038 ORTHO05D010897 1.3e-14 85.1 413 26.6
AT1G73130 Arabidopsis thaliana HOM05D009038 ORTHO05D010897 6.3e-14 82.8 256 30.9
AL2G32880 Arabidopsis lyrata HOM05D009038 ORTHO05D010897 9.1e-13 79.0 239 32.2
A02p18460 Brassica napus HOM05D009038 ORTHO05D010897 2.0e-12 77.8 83 54.2
BraA02t06885Z Brassica rapa HOM05D009038 ORTHO05D010897 2.0e-12 77.8 83 54.2
C02p30590 Brassica napus HOM05D009038 ORTHO05D010897 4.5e-12 76.6 83 55.4
BolC2t09109H Brassica oleracea HOM05D009038 ORTHO05D010897 4.5e-12 76.6 83 55.4
Manes.15G092100 Manihot esculenta HOM05D008023 ORTHO05D002944 1.9e-10 71.2 92 45.7
GSVIVG01014227001 Vitis vinifera HOM05D008023 ORTHO05D002944 2.5e-10 70.9 95 47.4
CsaV3_4G033230 Cucumis sativus L. HOM05D008023 ORTHO05D010897 3.2e-10 70.5 89 44.9
ClCG11G017550 Citrullus lanatus HOM05D008023 ORTHO05D002944 4.2e-10 70.1 83 48.2
BcaB07g33996 Brassica carinata HOM05D009038 ORTHO05D010897 5.5e-10 69.7 68 58.8
BraA06t24527Z Brassica rapa HOM05D009038 ORTHO05D010897 5.5e-10 69.7 84 52.4
A06p13850 Brassica napus HOM05D009038 ORTHO05D010897 9.4e-10 68.9 84 51.2
BcaB07g34003 Brassica carinata HOM05D009038 ORTHO05D010897 1.6e-09 68.2 63 60.3
Cpa.g.sc131.62 Carica papaya HOM05D008023 ORTHO05D002944 2.1e-09 67.8 86 45.3
MD11G1259700 Malus domestica HOM05D008023 ORTHO05D002944 2.1e-09 67.8 83 43.4
TWI39G0037 Tripterygium wilfordii HOM05D008023 ORTHO05D002944 2.1e-09 67.8 91 42.9
BcaB07g34000 Brassica carinata HOM05D009038 ORTHO05D010897 2.7e-09 67.4 64 59.4
MELO3C025631.2 Cucumis melo HOM05D008023 ORTHO05D002944 2.7e-09 67.4 83 44.6
Manes.03G103000 Manihot esculenta HOM05D008023 ORTHO05D002944 2.7e-09 67.4 90 46.7
A06p13660 Brassica napus HOM05D009038 ORTHO05D010897 4.7e-09 66.6 84 50.0
A06p13710 Brassica napus HOM05D009038 ORTHO05D010897 4.7e-09 66.6 84 50.0
A06p13800 Brassica napus HOM05D009038 ORTHO05D010897 4.7e-09 66.6 84 50.0
Prupe.4G170200 Prunus persica HOM05D008023 ORTHO05D002944 4.7e-09 66.6 83 45.8
BraA06t24517Z Brassica rapa HOM05D009038 ORTHO05D010897 1.0e-08 65.5 88 48.9
Duzib170G0431 Durio zibethinus HOM05D008023 ORTHO05D002944 1.8e-08 64.7 87 46.0
Potri.001G376800 Populus trichocarpa HOM05D008023 ORTHO05D002944 1.8e-08 64.7 83 45.8
Thecc.07G105200 Theobroma cacao HOM05D008023 ORTHO05D002944 3.0e-08 63.9 87 46.0
Glyma.06G231200 Glycine max HOM05D008023 ORTHO05D002944 5.2e-08 63.2 89 39.3
MD03G1240400 Malus domestica HOM05D008023 ORTHO05D002944 5.2e-08 63.2 83 39.8
BraA06t24522Z Brassica rapa HOM05D009038 ORTHO05D010897 8.8e-08 62.4 94 44.7
Duzib213G0674 Durio zibethinus HOM05D008023 ORTHO05D002944 8.8e-08 62.4 87 44.8
FAN21G3564 Fragaria x ananassa HOM05D008023 ORTHO05D002944 8.8e-08 62.4 89 41.6
FAN25G1709 Fragaria x ananassa HOM05D008023 ORTHO05D002944 8.8e-08 62.4 83 43.4
TPR.G12029 Trifolium pratense HOM05D008023 ORTHO05D002944 8.8e-08 62.4 85 42.4
Atru.chr2.2242 Acer truncatum HOM05D008023 ORTHO05D002944 1.1e-07 62.0 86 43.0
RcHm_v2.0_Chr5g0031461 Rosa chinensis HOM05D008023 ORTHO05D002944 1.1e-07 62.0 89 41.6
Ciclev10008068m.g Citrus clementina HOM05D008023 ORTHO05D002944 2.6e-07 60.8 86 43.0
Gohir.D11G306100 Gossypium hirsutum HOM05D008023 ORTHO05D002944 2.6e-07 60.8 87 43.7
Medtr8g463800 Medicago truncatula HOM05D008023 ORTHO05D002944 2.6e-07 60.8 86 39.5
QL08p026875 Quercus lobata HOM05D008023 ORTHO05D002944 2.6e-07 60.8 84 46.4
VMungo1127G0722 Vigna mungo HOM05D008023 ORTHO05D002944 2.6e-07 60.8 85 42.4
Dinv14970 Davidia involucrata HOM05D008023 ORTHO05D002944 3.3e-07 60.5 85 43.5
FvH4_3g18640 Fragaria vesca HOM05D008023 ORTHO05D002944 3.3e-07 60.5 89 40.4
FAN11G0626 Fragaria x ananassa HOM05D008023 ORTHO05D002944 3.3e-07 60.5 89 40.4
Psat4g175400 Pisum sativum HOM05D008023 ORTHO05D002944 3.3e-07 60.5 85 41.2
Ca_23071_v3 Cicer arietinum L. HOM05D008023 ORTHO05D002944 7.4e-07 59.3 83 39.8
Phvul.011G159200 Phaseolus vulgaris HOM05D008023 ORTHO05D002944 7.4e-07 59.3 76 46.1
Cfa019590 Carpinus fangiana HOM05D008023 ORTHO05D002944 9.7e-07 58.9 90 42.2
Cc05_g11360 Coffea canephora HOM05D008023 ORTHO05D002944 9.7e-07 58.9 83 38.6
Lalb_Chr19g0133891 Lupinus albus HOM05D008023 ORTHO05D002944 9.7e-07 58.9 91 39.6
FAN16G2995 Fragaria x ananassa HOM05D008023 ORTHO05D002944 1.3e-06 58.5 89 39.3
Lj3g0002978 Lotus japonicus HOM05D008023 ORTHO05D002944 1.7e-06 58.2 86 41.9
CANSAT35G0556 Cannabis sativa HOM05D008023 ORTHO05D010897 2.8e-06 57.4 83 38.6
Carub.0008s0659 Capsella rubella HOM05D009038 ORTHO05D010897 4.8e-06 56.6 171 31.6
Gohir.D05G344300 Gossypium hirsutum HOM05D008023 ORTHO05D002944 8.2e-06 55.8 87 42.5
Gorai.009G372300 Gossypium raimondii HOM05D008023 ORTHO05D002944 8.2e-06 55.8 87 42.5


User provided reference genes

Program Settings