Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 0.0e+00 1441.8 780 100.0
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 0.0e+00 1088.9 788 74.6
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 0.0e+00 1078.5 787 73.2
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.4e-310 1069.3 783 73.2
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 1.2e-309 1066.2 779 73.0
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 1.3e-305 1052.7 793 71.5
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 1.3e-300 1036.2 781 71.1
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 1.0e-297 1026.5 780 72.7
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 3.0e-297 1025.0 789 70.2
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 3.4e-293 1011.5 784 70.5
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 1.2e-282 976.5 787 68.2
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 2.4e-270 935.6 570 80.9
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 4.7e-266 921.4 791 65.7
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 1.5e-243 846.7 728 60.3
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 4.3e-243 845.1 641 66.5
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 1.5e-240 836.6 705 60.3
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 5.7e-240 834.7 707 61.8
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 1.1e-238 830.5 723 60.9
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.1e-234 816.2 732 58.7
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 1.2e-232 810.4 742 57.5
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.9e-228 795.4 788 56.2
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 1.1e-225 787.3 695 58.6
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 1.4e-225 786.9 715 61.5
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 4.0e-225 785.4 714 58.1
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.5e-224 783.5 699 59.8
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 3.7e-223 778.9 787 55.4
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 2.7e-221 772.7 719 57.9
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 1.0e-220 770.8 777 53.5
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 3.0e-220 769.2 613 62.6
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 3.0e-220 769.2 724 57.5
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 5.1e-220 768.5 689 59.9
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 1.1e-219 767.3 700 56.6
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.5e-219 766.9 719 55.9
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 2.5e-219 766.1 721 57.4
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 3.3e-219 765.8 700 56.7
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 9.5e-219 764.2 666 60.2
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 3.6e-218 762.3 604 63.4
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 3.1e-217 759.2 714 56.4
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 4.0e-217 758.8 600 63.2
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 8.9e-217 757.7 709 58.0
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 9.9e-216 754.2 692 57.4
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 1.7e-215 753.4 736 55.8
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 1.7e-215 753.4 718 55.7
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.2e-215 753.1 714 56.6
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 4.9e-215 751.9 701 58.5
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 8.4e-215 751.1 596 62.2
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 1.4e-214 750.4 586 63.1
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 7.1e-214 748.0 680 56.2
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 4.6e-213 745.3 707 57.4
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 1.7e-212 743.4 596 61.7
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 1.7e-212 743.4 731 53.6
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 5.1e-212 741.9 721 54.8
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 7.3e-211 738.0 595 61.0
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 1.6e-210 736.9 727 55.4
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 4.0e-209 732.3 719 54.7
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 6.4e-207 724.9 592 62.0
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 2.4e-206 723.0 637 58.6
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 3.2e-206 722.6 549 63.8
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 1.2e-205 720.7 589 61.5
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 3.5e-205 719.2 728 55.4
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 3.1e-201 706.1 670 55.4
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 4.0e-201 705.7 712 54.2
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 2.0e-200 703.4 581 59.6
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 9.9e-200 701.0 720 55.0
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 4.9e-199 698.7 673 55.7
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 1.1e-198 697.6 643 57.7
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 5.1e-196 688.7 769 52.0
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 1.9e-195 686.8 691 52.7
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 1.8e-193 680.2 632 56.8
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 2.2e-191 673.3 1015 41.3
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 6.7e-188 661.8 682 52.3
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 5.6e-187 658.7 748 51.2
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 3.7e-186 656.0 858 46.2
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 8.2e-186 654.8 598 56.4
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 3.4e-184 649.4 680 51.8
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 5.8e-184 648.7 755 50.5
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 4.9e-183 645.6 687 50.4
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 4.9e-183 645.6 697 50.1
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 8.4e-183 644.8 543 59.5
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.9e-182 643.7 619 54.4
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 3.9e-180 636.0 596 55.4
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 5.7e-179 632.1 691 50.9
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 3.3e-171 606.3 639 50.9
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 4.3e-171 605.9 613 51.5
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 5.3e-169 599.0 715 47.4
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 9.1e-169 598.2 608 51.3
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 6.7e-164 582.0 680 51.0
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 8.8e-164 581.6 634 50.6
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 9.1e-161 571.6 616 50.2
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 2.2e-159 567.0 582 50.9
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 5.3e-153 545.8 707 44.4
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 1.5e-150 537.7 632 44.9
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 1.0e-148 531.6 526 53.0
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 3.0e-148 530.0 382 68.3
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 1.2e-147 528.1 585 48.7
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 2.7e-141 506.9 542 52.8
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 1.2e-139 501.5 381 65.1
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 8.6e-135 485.3 658 41.9
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 2.1e-133 480.7 394 62.4
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 4.9e-130 469.5 583 49.2
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.5e-123 448.0 497 49.5
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 7.5e-123 445.7 665 42.7
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.7e-122 444.5 558 48.2
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 4.4e-115 419.9 347 60.8
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 7.0e-113 412.5 326 60.1
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.2e-109 401.7 333 58.9
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 1.8e-108 397.9 313 64.5
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.6e-107 394.0 290 64.5
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 1.2e-104 385.2 353 58.4
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 2.1e-101 374.4 494 42.3
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 2.3e-95 354.4 434 42.6
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 5.1e-95 353.2 515 39.8
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 8.7e-95 352.4 409 49.6
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.8e-93 347.4 523 42.4
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 4.9e-82 310.1 602 33.4
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.1e-80 304.7 726 30.7
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 1.3e-79 302.0 463 42.3
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 2.1e-77 294.7 307 54.7
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 1.2e-75 288.9 286 52.8
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 6.7e-63 246.5 296 48.0
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.5e-62 244.6 215 58.6
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 5.9e-59 233.4 284 51.4
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 1.9e-57 228.4 156 73.1
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 5.5e-57 226.9 153 68.6
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 1.2e-56 225.7 197 60.4
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 7.7e-51 206.5 289 42.2
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 7.7e-51 206.5 147 67.3
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.9e-49 201.8 215 47.0
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 7.2e-49 199.9 135 71.9
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.6e-48 198.7 194 54.6
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 7.9e-48 196.4 147 65.3
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 7.4e-46 189.9 338 40.2
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 5.3e-44 183.7 207 47.3
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 1.5e-38 165.6 289 38.1
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 5.7e-38 163.7 323 37.8
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 2.6e-35 154.8 327 37.9
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.5e-33 148.3 117 66.7
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.7e-32 144.8 99 73.7
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 5.7e-30 137.1 84 77.4
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.8e-28 132.1 236 36.0
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 3.5e-27 127.9 322 30.7
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 5.5e-25 120.6 83 66.3
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.3e-23 115.2 242 34.3
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.3e-23 115.2 87 59.8
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.3e-21 109.4 127 53.5
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.8e-21 108.2 85 60.0
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 4.9e-21 107.5 70 74.3
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 7.0e-20 103.6 90 62.2
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 6.6e-18 97.1 70 65.7
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 8.0e-16 90.1 105 48.6
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 8.9e-15 86.7 92 53.3
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 4.1e-12 77.8 82 48.8
Aqoxy1G02674 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 1.9e-09 68.9 55 60.0
Rhsim03G0091700 Rhododendron simsii HOM05D000751 ORTHO05D340051 2.3e-07 62.0 41 73.2


User provided reference genes

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