Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 4.5e-121 438.0 224 100.0
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 4.4e-108 394.8 218 91.3
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 1.4e-106 389.8 224 88.8
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 1.4e-106 389.8 224 89.3
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 2.0e-105 386.0 224 87.9
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 4.5e-105 384.8 223 87.9
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 5.0e-104 381.3 224 86.2
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 5.0e-104 381.3 224 86.2
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 1.5e-103 379.8 224 85.7
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 2.3e-101 372.5 224 84.4
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 5.2e-101 371.3 219 86.3
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 1.5e-100 369.8 224 83.5
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 3.4e-100 368.6 224 82.1
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 4.4e-100 368.2 217 83.4
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 6.3e-99 364.4 224 82.6
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.0e-97 359.4 224 80.8
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 3.5e-97 358.6 224 79.9
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 5.9e-97 357.8 226 82.7
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 1.7e-96 356.3 224 80.4
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 2.2e-96 355.9 224 79.0
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.2e-96 355.9 224 80.4
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 5.0e-96 354.8 218 82.1
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 5.0e-96 354.8 224 77.7
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 1.5e-95 353.2 230 78.7
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 2.5e-95 352.4 218 82.1
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.2e-95 352.1 218 81.2
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 5.5e-95 351.3 224 76.8
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 5.5e-95 351.3 224 78.6
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 7.2e-95 350.9 224 77.7
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 1.6e-94 349.7 243 74.9
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.6e-94 349.7 214 79.4
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 1.6e-94 349.7 217 78.8
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 1.6e-94 349.7 207 83.6
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 4.7e-94 348.2 221 79.2
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 1.8e-93 346.3 224 79.0
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 1.8e-93 346.3 221 79.2
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 2.3e-93 345.9 224 78.1
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 6.8e-93 344.4 224 77.7
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 8.8e-93 344.0 217 78.8
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 8.8e-93 344.0 211 81.5
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 1.5e-92 343.2 217 78.8
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 2.0e-92 342.8 217 77.4
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 2.6e-92 342.4 216 77.8
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 2.6e-92 342.4 214 78.5
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 4.4e-92 341.7 214 79.9
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 4.4e-92 341.7 216 80.1
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 1.7e-91 339.7 219 78.5
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 2.2e-91 339.3 224 77.2
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 3.7e-91 338.6 221 77.4
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 4.9e-91 338.2 242 73.1
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 6.3e-91 337.8 219 74.4
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 6.3e-91 337.8 224 75.0
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 1.8e-90 336.3 216 77.3
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 1.8e-90 336.3 224 75.4
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.4e-90 335.9 224 75.4
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 3.1e-90 335.5 216 76.9
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 7.0e-90 334.3 216 75.9
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 7.0e-90 334.3 219 75.8
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 7.0e-90 334.3 220 76.4
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 1.2e-89 333.6 224 74.6
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 1.3e-88 330.1 217 76.0
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 2.3e-88 329.3 220 73.6
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.3e-88 329.3 212 78.3
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 3.3e-87 325.5 219 74.4
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.8e-86 322.4 224 71.0
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 6.1e-86 321.2 228 73.7
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 6.1e-86 321.2 224 72.3
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 8.0e-86 320.9 219 76.3
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 3.0e-85 318.9 220 72.7
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 6.8e-85 317.8 219 72.6
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.5e-84 316.6 219 74.0
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 3.4e-84 315.5 258 66.3
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 5.7e-84 314.7 200 80.0
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 9.8e-84 313.9 216 72.7
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 2.2e-83 312.8 211 72.0
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 6.4e-83 311.2 193 79.8
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 1.4e-82 310.1 211 71.6
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 1.4e-82 310.1 224 68.3
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 3.0e-80 302.4 217 70.5
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 5.6e-79 298.1 246 64.2
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 9.5e-79 297.4 207 75.4
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 9.5e-79 297.4 211 72.5
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.1e-78 296.2 224 69.6
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 3.1e-77 292.4 190 77.9
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 3.4e-76 288.9 214 68.7
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 2.9e-75 285.8 225 68.4
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 3.7e-75 285.4 247 64.0
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 7.0e-74 281.2 260 58.8
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 1.6e-73 280.0 226 65.0
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 2.7e-73 279.3 214 66.8
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 3.9e-72 275.4 219 66.2
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 4.3e-71 271.9 228 65.8
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 2.1e-70 269.6 207 67.6
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 2.8e-70 269.2 178 75.8
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 5.1e-64 248.4 217 61.3
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.8e-62 242.7 265 54.0
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 1.1e-61 240.7 154 75.3
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 2.9e-59 232.6 208 61.1
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 6.0e-57 224.9 160 68.1
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 1.3e-56 223.8 220 55.5
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 5.6e-55 218.4 195 61.5
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 9.6e-55 217.6 228 53.5
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 2.8e-54 216.1 153 69.9
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 6.4e-51 204.9 225 52.9
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 7.8e-49 198.0 143 67.8
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 6.2e-46 188.3 201 56.2
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 9.0e-45 184.5 120 75.0
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 2.7e-41 172.9 217 47.0
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 2.3e-40 169.9 151 58.3
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 1.9e-34 150.2 385 32.7
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 2.4e-34 149.8 145 60.7
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 9.3e-34 147.9 105 68.6
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 3.9e-32 142.5 85 77.6
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 8.4e-27 124.8 93 64.5
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 4.1e-21 105.9 70 71.4
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 1.2e-20 104.4 66 81.8
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 3.8e-19 99.4 98 53.1
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 5.5e-18 95.5 51 86.3
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 1.6e-17 94.0 66 75.8
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 6.1e-17 92.0 57 84.2
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.8e-16 90.5 67 70.1
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.5e-15 86.7 195 34.4
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 6.3e-14 82.0 71 59.2
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 3.1e-13 79.7 45 88.9
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 6.9e-13 78.6 49 81.6
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 8.5e-11 71.6 99 41.4
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 5.5e-10 68.9 53 69.8


User provided reference genes

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