Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G2110 Aethionema arabicum HOM05D008786 ORTHO05D011065 8.9e-45 183.3 100 100.0
AT1G17285 Arabidopsis thaliana HOM05D008786 ORTHO05D011065 5.1e-16 87.8 103 55.3
CARHR017880 Cardamine hirsuta HOM05D008786 ORTHO05D011065 5.6e-15 84.3 101 55.4
A09p60480 Brassica napus HOM05D008786 ORTHO05D011065 1.3e-14 83.2 103 58.3
AL1G29540 Arabidopsis lyrata HOM05D008786 ORTHO05D011065 2.1e-14 82.4 101 58.4
Sp1g15420 Schrenkiella parvula HOM05D008786 ORTHO05D011065 3.7e-14 81.6 102 55.9
Thhalv10009909m.g Eutrema salsugineum HOM05D008786 ORTHO05D011065 4.8e-14 81.3 95 60.0
BcaC07g41411 Brassica carinata HOM05D008786 ORTHO05D011065 1.2e-12 76.6 104 58.7
C05p15680 Brassica napus HOM05D008786 ORTHO05D011065 1.2e-12 76.6 109 55.0
BcaC07g41429 Brassica carinata HOM05D008786 ORTHO05D011065 3.4e-12 75.1 104 57.7
C08p43960 Brassica napus HOM05D008786 ORTHO05D011065 3.4e-12 75.1 104 57.7
Carub.0001s1705 Capsella rubella HOM05D008786 ORTHO05D011065 3.4e-12 75.1 80 62.5
A06p13240 Brassica napus HOM05D008786 ORTHO05D011065 4.5e-12 74.7 110 54.5
CARHR065230 Cardamine hirsuta HOM05D008786 ORTHO05D011065 3.8e-11 71.6 96 53.1
Sp5g27390 Schrenkiella parvula HOM05D008786 ORTHO05D011065 8.4e-11 70.5 99 52.5
BraA06t24477Z Brassica rapa HOM05D008786 ORTHO05D011065 4.2e-10 68.2 111 52.3
BraA09t41419Z Brassica rapa HOM05D001342 ORTHO05D001286 4.2e-10 68.2 79 60.8
BcaB05g24747 Brassica carinata HOM05D008786 ORTHO05D011065 9.3e-10 67.0 99 49.5
Thhalv10019794m.g Eutrema salsugineum HOM05D008786 ORTHO05D011065 1.2e-09 66.6 81 59.3
A07p30280 Brassica napus HOM05D008786 ORTHO05D042067 3.5e-09 65.1 107 48.6
BolC5t30275H Brassica oleracea HOM05D001342 ORTHO05D001286 7.9e-09 63.9 85 54.1
AL1G29560 Arabidopsis lyrata HOM05D008786 ORTHO05D011065 1.3e-08 63.2 79 59.5
BcaB07g34035 Brassica carinata HOM05D008786 ORTHO05D011065 1.3e-08 63.2 102 51.0
BcaC05g25651 Brassica carinata HOM05D008786 ORTHO05D011065 1.8e-08 62.8 80 55.0
AT1G17300 Arabidopsis thaliana HOM05D008786 ORTHO05D011065 3.0e-08 62.0 76 57.9
BolC8t51945H Brassica oleracea HOM05D001342 ORTHO05D001286 5.1e-08 61.2 80 58.8
THA.LOC104812274 Tarenaya hassleriana HOM05D008786 ORTHO05D011065 1.9e-07 59.3 107 44.9
Carub.0002s1917 Capsella rubella HOM05D008786 ORTHO05D011065 2.5e-07 58.9 104 48.1
BcaB03g14979 Brassica carinata HOM05D008786 ORTHO05D011065 4.3e-07 58.2 104 45.2
C06p35030 Brassica napus HOM05D008786 ORTHO05D011065 1.6e-06 56.2 104 48.1
BolC6t38602H Brassica oleracea HOM05D008786 ORTHO05D011065 1.6e-06 56.2 104 48.1
BolC2t09030H Brassica oleracea HOM05D008786 ORTHO05D011065 2.8e-06 55.5 76 47.4
BcaC03g15370 Brassica carinata HOM05D008786 ORTHO05D011065 8.2e-06 53.9 76 46.1
C02p29830 Brassica napus HOM05D008786 ORTHO05D011065 8.2e-06 53.9 78 46.2


User provided reference genes

Program Settings