Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G1740 Aethionema arabicum HOM05D000154 ORTHO05D011669 6.6e-31 136.7 69 100.0
Aa31LG9G4340 Aethionema arabicum HOM05D000154 ORTHO05D000092 3.8e-10 67.8 39 84.6
THA.LOC104821633 Tarenaya hassleriana HOM05D000154 ORTHO05D000092 1.9e-09 65.5 39 82.1
THA.LOC104821871 Tarenaya hassleriana HOM05D000154 ORTHO05D000092 2.4e-09 65.1 39 82.1
Aa31LG7G1690 Aethionema arabicum HOM05D000154 ORTHO05D000092 5.4e-09 63.9 37 78.4
AL9U10160 Arabidopsis lyrata HOM05D000154 ORTHO05D000092 5.4e-09 63.9 39 79.5
AL9U10180 Arabidopsis lyrata HOM05D000154 ORTHO05D000092 5.4e-09 63.9 39 79.5
AL9U10190 Arabidopsis lyrata HOM05D000154 ORTHO05D000092 5.4e-09 63.9 39 79.5
AT4G13420 Arabidopsis thaliana HOM05D000154 ORTHO05D000092 5.4e-09 63.9 39 79.5
BcaC08g44699 Brassica carinata HOM05D000154 ORTHO05D000092 5.4e-09 63.9 39 79.5
A07p22270 Brassica napus HOM05D000154 ORTHO05D000092 5.4e-09 63.9 39 79.5
C06p22350 Brassica napus HOM05D000154 ORTHO05D000092 5.4e-09 63.9 39 79.5
BolC6t37422H Brassica oleracea HOM05D000154 ORTHO05D000092 5.4e-09 63.9 39 79.5
BraA07t29905Z Brassica rapa HOM05D000154 ORTHO05D000092 5.4e-09 63.9 39 79.5
Carub.0007s2913 Capsella rubella HOM05D000154 ORTHO05D000092 5.4e-09 63.9 39 79.5
CARHR219060 Cardamine hirsuta HOM05D000154 ORTHO05D000092 5.4e-09 63.9 39 79.5
Aa31LG7G1620 Aethionema arabicum HOM05D000154 ORTHO05D011669 7.1e-09 63.5 39 79.5
BcaB02g07720 Brassica carinata HOM05D000154 ORTHO05D000092 7.1e-09 63.5 39 76.9
Thhalv10024742m.g Eutrema salsugineum HOM05D000154 ORTHO05D000092 1.2e-08 62.8 39 76.9
Aa31LG9G4220 Aethionema arabicum HOM05D000154 ORTHO05D011669 1.6e-08 62.4 39 76.9
Aa31LG9G4270 Aethionema arabicum HOM05D000154 ORTHO05D011669 1.6e-08 62.4 39 82.1
Aa31LG9G4230 Aethionema arabicum HOM05D000154 ORTHO05D011669 6.0e-08 60.5 39 79.5
Aa31sc238G30 Aethionema arabicum HOM05D000154 ORTHO05D011669 6.0e-08 60.5 39 74.4
Aa31LG9G4320 Aethionema arabicum HOM05D000154 ORTHO05D011669 1.0e-07 59.7 39 79.5
Aa31LG7G1430 Aethionema arabicum HOM05D000154 ORTHO05D000092 2.3e-07 58.5 32 84.4
Glyma.07G042500 Glycine max HOM05D000154 ORTHO05D000092 3.0e-07 58.2 39 66.7
Aa31LG7G1650 Aethionema arabicum HOM05D000154 ORTHO05D011669 1.1e-06 56.2 39 69.2
Aa31sc36G70 Aethionema arabicum HOM05D000154 ORTHO05D011669 1.1e-06 56.2 39 69.2
Nitab4.5_0001302g0010 Nicotiana tabacum HOM05D000154 ORTHO05D000092 1.5e-06 55.8 39 61.5
Oeu051871.1 Olea europaea HOM05D000154 ORTHO05D000092 1.9e-06 55.5 39 61.5
Lalb_Chr04g0261131 Lupinus albus HOM05D000154 ORTHO05D000092 2.5e-06 55.1 39 61.5
Manes.09G172900 Manihot esculenta HOM05D000154 ORTHO05D000092 2.5e-06 55.1 39 61.5
Ciclev10027299m.g Citrus clementina HOM05D000154 ORTHO05D000092 3.3e-06 54.7 39 61.5
TWI36G1658 Tripterygium wilfordii HOM05D000154 ORTHO05D000092 4.3e-06 54.3 39 64.1
Dinv06944 Davidia involucrata HOM05D000154 ORTHO05D000092 5.6e-06 53.9 39 59.0
Prupe.1G212100 Prunus persica HOM05D000154 ORTHO05D000092 5.6e-06 53.9 39 59.0
Hund05404 Selenicereus undatus HOM05D000154 ORTHO05D000092 5.6e-06 53.9 63 49.2
Hund05405 Selenicereus undatus HOM05D000154 ORTHO05D000092 5.6e-06 53.9 63 49.2
Migut.K01130 Erythranthe guttata HOM05D000154 ORTHO05D000092 7.4e-06 53.5 39 56.4
Eucgr.G01992 Eucalyptus grandis HOM05D000154 ORTHO05D000092 7.4e-06 53.5 39 59.0
Os03g0575200 Oryza sativa ssp. japonica HOM05D000154 ORTHO05D000092 7.4e-06 53.5 39 61.5
SalBow2G0768 Salvia bowleyana HOM05D000154 ORTHO05D000092 7.4e-06 53.5 39 56.4
Cc05_g03840 Coffea canephora HOM05D000154 ORTHO05D000092 9.6e-06 53.1 39 59.0


User provided reference genes

Program Settings