Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 7.6e-46 186.8 94 100.0
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 2.6e-38 161.8 99 82.8
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 1.7e-37 159.1 99 81.8
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 2.9e-37 158.3 99 81.8
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 9.3e-36 153.3 99 79.8
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 3.5e-35 151.4 93 78.5
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 3.5e-35 151.4 93 78.5
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 3.5e-35 151.4 99 79.8
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 4.6e-35 151.0 99 80.8
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 6.0e-35 150.6 93 78.5
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 1.5e-33 146.0 93 79.6
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 9.6e-33 143.3 95 77.9
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 9.6e-33 143.3 95 77.9
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 8.1e-32 140.2 93 78.5
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 2.4e-31 138.7 94 77.7
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 5.3e-31 137.5 93 75.3
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 9.0e-31 136.7 91 74.7
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 7.1e-28 127.1 92 71.7
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 8.7e-26 120.2 94 69.1
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 1.5e-25 119.4 94 69.1
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 4.3e-25 117.9 97 68.0
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 7.4e-25 117.1 94 64.9
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 9.6e-25 116.7 83 72.3
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 1.6e-24 115.9 94 66.0
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 1.6e-24 115.9 94 62.8
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 1.6e-24 115.9 100 63.0
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 2.1e-24 115.5 91 64.8
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 4.8e-24 114.4 97 66.0
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 4.8e-24 114.4 94 68.1
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 4.8e-24 114.4 92 65.2
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 4.8e-24 114.4 93 68.8
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 6.2e-24 114.0 94 63.8
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 6.2e-24 114.0 94 64.9
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 6.2e-24 114.0 91 68.1
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 6.2e-24 114.0 97 67.0
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 8.2e-24 113.6 99 64.6
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 8.2e-24 113.6 91 68.1
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 8.2e-24 113.6 101 62.4
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 8.2e-24 113.6 94 66.0
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 1.1e-23 113.2 96 62.5
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.1e-23 113.2 94 64.9
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 1.1e-23 113.2 97 63.9
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.4e-23 112.8 94 64.9
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.4e-23 112.8 98 63.3
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.4e-23 112.8 94 62.8
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 1.8e-23 112.5 91 67.0
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 2.4e-23 112.1 94 61.7
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 2.4e-23 112.1 100 61.0
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 3.1e-23 111.7 94 63.8
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 4.0e-23 111.3 97 64.9
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 4.0e-23 111.3 97 64.9
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.3e-23 110.9 94 63.8
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 9.0e-23 110.2 96 64.6
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 2.0e-22 109.0 90 64.4
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.0e-22 109.0 90 64.4
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 3.4e-22 108.2 94 63.8
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 4.5e-22 107.8 97 63.9
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 7.6e-22 107.1 94 60.6
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 1.3e-21 106.3 94 62.8
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 2.9e-21 105.1 94 59.6
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 2.9e-21 105.1 59 86.4
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 6.5e-21 104.0 96 59.4
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 6.5e-21 104.0 96 59.4
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 6.5e-21 104.0 94 58.5
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 6.5e-21 104.0 94 59.6
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 1.1e-20 103.2 94 58.5
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 1.1e-20 103.2 95 64.2
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 1.4e-20 102.8 53 92.5
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 1.4e-20 102.8 53 92.5
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 3.2e-20 101.7 99 54.5
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 3.2e-20 101.7 68 72.1
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 4.2e-20 101.3 92 58.7
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 5.5e-20 100.9 82 67.1
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 7.1e-20 100.5 96 58.3
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 7.1e-20 100.5 94 62.8
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 1.2e-19 99.8 92 63.0
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 1.2e-19 99.8 97 56.7
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 1.2e-19 99.8 82 69.5
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 2.1e-19 99.0 84 64.3
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.1e-19 99.0 89 62.9
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 2.1e-19 99.0 62 75.8
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 2.7e-19 98.6 94 57.4
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 4.6e-19 97.8 53 86.8
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 6.0e-19 97.4 84 65.5
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 7.9e-19 97.1 93 57.0
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 7.9e-19 97.1 81 64.2
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 1.0e-18 96.7 97 57.7
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.3e-18 96.3 87 63.2
Aa31LG7G15350 Aethionema arabicum HOM05D007135 ORTHO05D008880 1.1e-17 93.2 62 79.0
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 1.5e-17 92.8 81 63.0
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 7.4e-17 90.5 101 53.5
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 1.3e-16 89.7 87 62.1
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 1.6e-16 89.4 82 64.6
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 2.2e-16 89.0 81 58.0
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 2.8e-16 88.6 85 60.0
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 1.1e-15 86.7 81 63.0
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 6.9e-15 84.0 78 59.0
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 1.5e-14 82.8 78 59.0
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 1.0e-13 80.1 78 59.0
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 2.5e-12 75.5 49 75.5
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 3.2e-12 75.1 79 51.9
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 3.2e-12 75.1 82 56.1
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 3.2e-12 75.1 46 80.4
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 4.2e-12 74.7 50 80.0
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 1.6e-11 72.8 81 50.6
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 4.6e-11 71.2 59 71.2
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 2.3e-10 68.9 94 47.9
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 3.0e-10 68.6 40 85.0
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 5.1e-10 67.8 79 53.2
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 1.1e-09 66.6 50 64.0
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 2.6e-06 55.5 36 83.3
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 2.6e-06 55.5 36 83.3


User provided reference genes

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