Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 8.0e-310 1066.2 534 100.0
Aa31LG8G17170 Aethionema arabicum HOM05D002733 ORTHO05D003856 8.7e-155 551.2 340 82.6
Aa31LG8G11380 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.8e-129 466.5 654 45.9
Aa31LG8G17150 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.4e-117 427.6 685 42.0
Aa31LG8G17200 Aethionema arabicum HOM05D002733 ORTHO05D003856 9.2e-88 328.6 362 51.7
Aa31LG8G17140 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.9e-54 216.9 174 66.1
Aa31LG8G17210 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.5e-53 214.2 131 79.4
Aa31LG7G1530 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.0e-50 204.5 193 59.1
Aa31LG3G6410 Aethionema arabicum HOM05D002733 ORTHO05D003856 9.9e-50 202.2 175 60.6
Aa31LG8G17160 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.7e-49 201.4 197 57.9
Aa31LG7G1590 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.9e-49 200.7 168 61.3
Aa31LG7G1540 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.0e-47 193.0 192 55.2
Aa31LG8G17220 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.2e-40 170.6 172 53.5
Aa31LG6G10180 Aethionema arabicum HOM05D002733 ORTHO05D003856 7.9e-39 166.0 149 55.7
Aa31LG7G1580 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.1e-38 163.3 127 69.3
Aa31LG7G1600 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.9e-37 161.4 159 54.1
Aa31LG8G17190 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.9e-37 161.4 161 53.4
BolC3t15022H Brassica oleracea HOM05D002733 ORTHO05D003856 7.4e-37 159.5 180 46.1
A04p30010 Brassica napus HOM05D002733 ORTHO05D003856 9.6e-37 159.1 165 50.3
BraA04t18506Z Brassica rapa HOM05D002733 ORTHO05D003856 9.6e-37 159.1 165 50.3
C03p26370 Brassica napus HOM05D002733 ORTHO05D003856 1.3e-36 158.7 180 46.7
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 1.1e-35 155.6 164 50.6
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.4e-35 155.2 168 50.0
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 2.4e-35 154.5 168 48.2
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 4.0e-35 153.7 173 50.9
AL4G37790 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 6.9e-35 152.9 164 47.6
BcaC02g07356 Brassica carinata HOM05D002733 ORTHO05D003856 9.0e-35 152.5 164 50.0
BraA03t11459Z Brassica rapa HOM05D002733 ORTHO05D003856 2.0e-34 151.4 164 47.0
A03p22270 Brassica napus HOM05D002733 ORTHO05D003856 3.4e-34 150.6 164 47.0
Aa31LG7G1510 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.7e-33 148.3 162 51.9
Sp5g18240 Schrenkiella parvula HOM05D002733 ORTHO05D003856 4.9e-33 146.7 175 44.0
Aa31LG7G1550 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.1e-32 145.6 142 54.2
Thhalv10017517m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 2.5e-29 134.4 168 45.2
AT4G03160 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 6.2e-28 129.8 125 49.6
CARHR135120 Cardamine hirsuta HOM05D002733 ORTHO05D003856 6.2e-28 129.8 164 42.7
BcaC01g05470 Brassica carinata HOM05D002733 ORTHO05D003856 1.8e-27 128.3 179 41.9
Sp4g22040 Schrenkiella parvula HOM05D010480 ORTHO05D003856 2.4e-27 127.9 164 45.7
C03p26740 Brassica napus HOM05D002733 ORTHO05D003856 4.0e-27 127.1 173 42.8
BolC3t15059H Brassica oleracea HOM05D002733 ORTHO05D003856 4.0e-27 127.1 173 42.8
BcaC01g05431 Brassica carinata HOM05D002733 ORTHO05D003856 6.9e-27 126.3 173 42.8
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 2.0e-26 124.8 166 44.0
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 5.0e-25 120.2 432 25.2
Aa31LG8G17180 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.5e-25 119.8 122 54.1
BcaB02g09048 Brassica carinata HOM05D002733 ORTHO05D003856 1.1e-24 119.0 169 39.6
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 1.6e-23 115.2 182 41.2
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 3.0e-22 110.9 193 36.3
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 3.9e-22 110.5 193 36.3
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 3.9e-22 110.5 193 36.3
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 8.7e-22 109.4 190 37.9
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 1.9e-21 108.2 193 35.8
A05p06630 Brassica napus HOM05D010480 ORTHO05D003856 3.3e-21 107.5 165 39.4
BraA05t19630Z Brassica rapa HOM05D010480 ORTHO05D003856 3.3e-21 107.5 165 39.4
C04p07760 Brassica napus HOM05D010480 ORTHO05D003856 1.6e-20 105.1 165 38.8
BolC4t22393H Brassica oleracea HOM05D010480 ORTHO05D003856 1.6e-20 105.1 165 38.8
CARHR135110 Cardamine hirsuta HOM05D002733 ORTHO05D003856 1.6e-20 105.1 122 46.7
BcaC02g12110 Brassica carinata HOM05D010480 ORTHO05D003856 3.7e-20 104.0 165 38.2
AT1G20600 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 1.1e-19 102.4 173 42.8
BcaC02g12109 Brassica carinata HOM05D010480 ORTHO05D003856 2.4e-19 101.3 168 39.3
BolC4t22394H Brassica oleracea HOM05D010480 ORTHO05D003856 2.4e-19 101.3 168 39.3
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 2.4e-19 101.3 193 35.2
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 2.4e-19 101.3 137 35.0
C04p07770 Brassica napus HOM05D010480 ORTHO05D003856 3.1e-19 100.9 170 38.8
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 3.1e-19 100.9 200 32.5
BcaB02g09089 Brassica carinata HOM05D010480 ORTHO05D003856 4.1e-19 100.5 170 38.2
A05p06650 Brassica napus HOM05D010480 ORTHO05D003856 3.4e-18 97.4 165 38.8
BraA05t19631Z Brassica rapa HOM05D010480 ORTHO05D003856 3.4e-18 97.4 165 38.8
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 3.4e-18 97.4 116 44.0
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 1.0e-17 95.9 189 29.1
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 1.7e-17 95.1 153 35.9
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 1.7e-17 95.1 142 35.2
BolC4t22395H Brassica oleracea HOM05D010480 ORTHO05D003856 2.2e-17 94.7 164 37.2
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 2.2e-17 94.7 105 42.9
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.2e-17 94.7 105 42.9
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.2e-17 94.7 105 42.9
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 2.2e-17 94.7 142 35.2
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 2.9e-17 94.4 170 30.0
Thhalv10003384m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 3.8e-17 94.0 160 37.5
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 5.0e-17 93.6 142 34.5
Aa31LG6G9550 Aethionema arabicum HOM05D002733 ORTHO05D003856 6.5e-17 93.2 64 68.8
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 6.5e-17 93.2 108 43.5
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 6.5e-17 93.2 135 38.5
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 8.5e-17 92.8 147 35.4
BraA05t19632Z Brassica rapa HOM05D010480 ORTHO05D003856 1.1e-16 92.4 168 38.1
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.1e-16 92.4 141 34.0
BolC3t19780H Brassica oleracea HOM05D010480 ORTHO05D003856 1.4e-16 92.0 151 40.4
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 1.4e-16 92.0 195 33.3
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 1.9e-16 91.7 136 34.6
A05p06660 Brassica napus HOM05D010480 ORTHO05D003856 2.5e-16 91.3 168 37.5
BcaC02g12108 Brassica carinata HOM05D010480 ORTHO05D003856 4.2e-16 90.5 164 37.2
C04p07780 Brassica napus HOM05D010480 ORTHO05D003856 4.2e-16 90.5 164 37.2
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 7.2e-16 89.7 106 42.5
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 7.2e-16 89.7 106 42.5
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 7.2e-16 89.7 106 42.5
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 9.4e-16 89.4 130 37.7
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 1.2e-15 89.0 154 33.1
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 1.6e-15 88.6 109 41.3
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 2.1e-15 88.2 131 36.6
Haze_00185 Corylus avellana HOM05D002733 ORTHO05D003856 2.7e-15 87.8 104 44.2
Peaxi162Scf00665g00139 Petunia axillaris HOM05D002733 ORTHO05D003856 4.6e-15 87.0 339 26.5
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 7.9e-15 86.3 150 31.3
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 7.9e-15 86.3 185 31.9
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 1.0e-14 85.9 138 38.4
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 1.0e-14 85.9 134 35.8
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.0e-14 85.9 130 36.9
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.0e-14 85.9 107 38.3
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.0e-14 85.9 131 35.9
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 1.4e-14 85.5 162 32.7
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 1.8e-14 85.1 142 32.4
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 1.8e-14 85.1 148 31.1
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 2.3e-14 84.7 148 31.1
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 3.0e-14 84.3 128 33.6
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 3.0e-14 84.3 121 36.4
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 3.9e-14 84.0 150 31.3
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 3.9e-14 84.0 136 36.0
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 3.9e-14 84.0 136 36.0
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 6.7e-14 83.2 150 31.3
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 6.7e-14 83.2 126 34.9
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 8.8e-14 82.8 105 39.0
THA.LOC104810048 Tarenaya hassleriana HOM05D002733 ORTHO05D003856 8.8e-14 82.8 167 34.1
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.1e-13 82.4 145 32.4
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 1.1e-13 82.4 105 39.0
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 1.1e-13 82.4 124 34.7
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 1.1e-13 82.4 108 38.9
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 1.5e-13 82.0 105 39.0
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 1.5e-13 82.0 138 33.3
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 2.0e-13 81.6 132 36.4
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 2.0e-13 81.6 150 34.0
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 2.0e-13 81.6 105 39.0
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 2.0e-13 81.6 104 38.5
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 2.0e-13 81.6 112 38.4
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 2.5e-13 81.3 130 37.7
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 2.5e-13 81.3 109 37.6
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 3.3e-13 80.9 129 34.1
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 3.3e-13 80.9 105 38.1
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 3.3e-13 80.9 120 35.0
DCAR_003269 Daucus carota HOM05D002733 ORTHO05D003856 4.3e-13 80.5 152 31.6
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 4.3e-13 80.5 136 35.3
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 4.3e-13 80.5 122 36.1
Aa31LG7G1570 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.7e-13 80.1 82 62.2
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 7.4e-13 79.7 111 36.9
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 9.7e-13 79.3 146 34.2
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 2.2e-12 78.2 145 33.1
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 3.7e-12 77.4 128 37.5
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 4.8e-12 77.0 143 32.9
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 8.2e-12 76.3 155 32.3
Aqoxy7G01497 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 1.1e-11 75.9 120 34.2
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 1.1e-11 75.9 162 30.9
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 1.4e-11 75.5 112 37.5
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 2.4e-11 74.7 133 33.1
Aa31LG6G9560 Aethionema arabicum HOM05D002733 ORTHO05D003856 3.1e-11 74.3 64 62.5
Eucgr.C01014 Eucalyptus grandis HOM05D002733 ORTHO05D003856 6.9e-11 73.2 152 30.3
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 6.9e-11 73.2 128 35.2
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 1.2e-10 72.4 141 33.3
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 1.2e-10 72.4 160 32.5
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.2e-10 72.4 175 32.6
Haze_00197 Corylus avellana HOM05D002733 ORTHO05D003856 2.0e-10 71.6 114 36.8
Aqoxy1G01498 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 2.6e-10 71.2 104 35.6
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 3.4e-10 70.9 126 31.7
PGSC0003DMG400000107 Solanum tuberosum HOM05D015341 ORTHO05D011718 3.4e-10 70.9 154 31.2
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 4.5e-10 70.5 129 31.8
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 5.9e-10 70.1 180 29.4
Peaxi162Scf00665g00126 Petunia axillaris HOM05D002733 ORTHO05D003856 5.9e-10 70.1 111 32.4
DCAR_014131 Daucus carota HOM05D002733 ORTHO05D003856 7.7e-10 69.7 129 32.6
BcaC01g00056 Brassica carinata HOM05D010480 ORTHO05D003856 1.0e-09 69.3 124 41.1
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 5.0e-09 67.0 103 35.0
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.4e-08 65.5 106 37.7
Dinv07992 Davidia involucrata HOM05D002733 ORTHO05D003856 1.4e-08 65.5 119 36.1
CDE02G0413 Ceratophyllum demersum HOM05D040791 ORTHO05D013425 1.9e-08 65.1 318 23.3
Dinv41650 Davidia involucrata HOM05D002733 ORTHO05D003856 2.5e-08 64.7 101 36.6
QL01p018935 Quercus lobata HOM05D002733 ORTHO05D003856 4.2e-08 63.9 122 32.0
CiPaw.03G015100 Carya illinoinensis HOM05D002733 ORTHO05D003856 9.4e-08 62.8 139 31.7
Eucgr.I00861 Eucalyptus grandis HOM05D000896 ORTHO05D000594 9.4e-08 62.8 141 29.1
Eucgr.I00811 Eucalyptus grandis HOM05D000896 ORTHO05D000594 1.6e-07 62.0 138 34.1
PGSC0003DMG400000106 Solanum tuberosum HOM05D015341 ORTHO05D011718 1.6e-07 62.0 138 31.9
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 2.1e-07 61.6 211 28.9
Carub.0001s0495 Capsella rubella HOM05D000896 ORTHO05D000594 7.9e-07 59.7 142 28.9
Dinv32585 Davidia involucrata HOM05D013692 ORTHO05D011718 7.9e-07 59.7 125 30.4
Sabra08G0161200 Salix brachista HOM05D002733 ORTHO05D003856 1.0e-06 59.3 102 35.3
Duzib177G0732 Durio zibethinus HOM05D000896 ORTHO05D000594 2.3e-06 58.2 146 27.4
Duzib264G0660 Durio zibethinus HOM05D001713 ORTHO05D001669 3.0e-06 57.8 96 38.5
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 3.0e-06 57.8 181 26.5
QL01p018939 Quercus lobata HOM05D002733 ORTHO05D003856 3.0e-06 57.8 172 29.1
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 3.0e-06 57.8 173 30.1
TWI34G0441 Tripterygium wilfordii HOM05D000896 ORTHO05D000594 3.0e-06 57.8 170 27.1
Carub.0322s0001 Capsella rubella HOM05D000896 ORTHO05D000594 3.9e-06 57.4 138 31.2
Prupe.7G224100 Prunus persica HOM05D002733 ORTHO05D003856 5.1e-06 57.0 104 31.7
PSO170G0580 Papaver somniferum HOM05D047907 ORTHO05D011718 6.7e-06 56.6 150 26.0


User provided reference genes

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