Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 9.4e-74 280.0 134 100.0
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 1.7e-27 126.3 99 67.7
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 7.3e-26 120.9 126 56.3
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 6.8e-24 114.4 123 56.9
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.2e-23 113.6 92 62.0
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 5.8e-23 111.3 103 65.0
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 5.4e-21 104.8 100 60.0
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 9.2e-21 104.0 99 59.6
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 4.6e-20 101.7 98 59.2
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 2.3e-19 99.4 103 58.3
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 2.9e-14 82.4 55 69.1
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.1e-13 80.5 100 51.0
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.3e-11 73.6 103 48.5
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.3e-11 72.8 103 48.5
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.5e-10 70.1 105 46.7
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 2.5e-10 69.3 114 41.2
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 4.3e-10 68.6 89 48.3
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 7.3e-10 67.8 65 58.5
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 7.3e-10 67.8 99 44.4
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 1.6e-09 66.6 98 43.9
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 1.6e-09 66.6 100 41.0
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 2.1e-09 66.2 78 52.6
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 2.8e-09 65.9 83 43.4
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 3.6e-09 65.5 77 48.1
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 3.6e-09 65.5 49 65.3
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 4.7e-09 65.1 98 38.8
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 6.2e-09 64.7 102 42.2
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 6.2e-09 64.7 44 68.2
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 6.2e-09 64.7 99 40.4
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 8.1e-09 64.3 63 55.6
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 8.1e-09 64.3 103 40.8
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 8.1e-09 64.3 39 71.8
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.1e-08 63.9 94 42.6
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 1.4e-08 63.5 97 46.4
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 1.4e-08 63.5 39 71.8
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 4.0e-08 62.0 45 57.8
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 4.0e-08 62.0 96 43.8
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 5.2e-08 61.6 62 48.4
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 8.9e-08 60.8 50 58.0
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 8.9e-08 60.8 62 51.6
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 8.9e-08 60.8 91 40.7
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 1.2e-07 60.5 74 47.3
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 1.2e-07 60.5 60 55.0
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 1.2e-07 60.5 39 69.2
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 1.5e-07 60.1 84 41.7
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 1.5e-07 60.1 37 73.0
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 1.5e-07 60.1 57 54.4
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 2.0e-07 59.7 60 56.7
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 2.0e-07 59.7 108 37.0
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 2.0e-07 59.7 39 66.7
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 2.0e-07 59.7 57 54.4
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 2.6e-07 59.3 36 69.4
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 2.6e-07 59.3 65 49.2
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 3.4e-07 58.9 42 61.9
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 3.4e-07 58.9 58 51.7
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 4.4e-07 58.5 77 45.5
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 4.4e-07 58.5 34 76.5
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 5.8e-07 58.2 63 49.2
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 5.8e-07 58.2 37 73.0
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 5.8e-07 58.2 102 39.2
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 7.6e-07 57.8 62 51.6
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 7.6e-07 57.8 37 70.3
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 9.9e-07 57.4 37 67.6
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 9.9e-07 57.4 62 48.4
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 9.9e-07 57.4 50 58.0
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 9.9e-07 57.4 43 62.8
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 1.3e-06 57.0 45 60.0
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 1.3e-06 57.0 43 62.8
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 1.7e-06 56.6 36 69.4
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 2.2e-06 56.2 41 63.4
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 2.9e-06 55.8 63 46.0
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 2.9e-06 55.8 61 47.5
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 3.8e-06 55.5 61 49.2
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 4.9e-06 55.1 37 64.9
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 8.4e-06 54.3 45 55.6


User provided reference genes

Program Settings