Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 4.4e-110 401.4 209 100.0
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.4e-68 263.5 206 72.3
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 7.3e-65 251.1 206 69.9
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.8e-63 246.5 208 67.8
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 5.2e-63 245.0 209 69.4
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 5.2e-63 245.0 208 67.8
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 3.4e-62 242.3 209 68.9
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 4.4e-62 241.9 209 67.5
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 9.8e-62 240.7 209 67.0
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 9.8e-62 240.7 210 67.6
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 6.4e-61 238.0 210 67.6
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 6.4e-61 238.0 210 66.7
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.4e-60 236.9 211 65.4
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 7.0e-60 234.6 209 67.9
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 9.2e-60 234.2 208 66.8
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.6e-59 233.4 211 67.3
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 2.1e-59 233.0 210 67.1
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 2.3e-58 229.6 212 64.6
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 5.1e-58 228.4 210 66.7
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 5.1e-58 228.4 210 66.7
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 6.6e-58 228.0 210 66.7
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 6.6e-58 228.0 210 66.7
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 1.1e-57 227.3 209 66.5
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.1e-57 227.3 209 65.6
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 4.0e-55 218.8 204 63.2
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 1.0e-50 204.1 211 61.1
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 4.3e-49 198.7 216 56.5
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 2.4e-47 193.0 214 57.5
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 4.0e-47 192.2 173 65.9
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 8.9e-47 191.0 173 64.7
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 2.0e-46 189.9 220 54.5
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 4.4e-46 188.7 195 57.9
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 5.8e-46 188.3 193 60.1
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 7.6e-46 188.0 205 58.0
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 9.9e-46 187.6 176 62.5
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.3e-45 187.2 208 56.2
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.3e-45 187.2 208 56.2
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 1.7e-45 186.8 183 62.3
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 2.2e-45 186.4 173 65.3
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 2.9e-45 186.0 195 58.5
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 6.4e-45 184.9 222 54.5
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 6.4e-45 184.9 173 64.7
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 6.4e-45 184.9 193 56.0
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 1.4e-44 183.7 206 55.3
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.9e-44 183.3 192 59.4
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.4e-44 183.0 173 64.2
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 5.4e-44 181.8 174 63.8
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 5.4e-44 181.8 203 57.6
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 5.4e-44 181.8 206 56.8
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 7.1e-44 181.4 162 66.7
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 7.1e-44 181.4 215 54.9
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 7.1e-44 181.4 186 57.5
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 7.1e-44 181.4 173 63.0
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 9.2e-44 181.0 164 65.9
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 1.2e-43 180.6 188 57.4
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 2.1e-43 179.9 186 57.5
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 2.1e-43 179.9 162 66.7
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 3.5e-43 179.1 172 63.4
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 3.5e-43 179.1 214 56.5
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 4.6e-43 178.7 191 58.6
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 6.0e-43 178.3 200 56.0
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 6.0e-43 178.3 200 56.0
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 6.0e-43 178.3 173 62.4
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 6.0e-43 178.3 189 58.2
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 7.8e-43 177.9 217 53.9
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 7.8e-43 177.9 178 59.6
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.0e-42 177.6 191 56.0
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 1.3e-42 177.2 211 56.4
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 1.3e-42 177.2 167 61.7
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 1.7e-42 176.8 107 87.9
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.7e-42 176.8 161 64.6
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 2.3e-42 176.4 178 59.0
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 2.3e-42 176.4 168 60.7
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 2.3e-42 176.4 201 57.2
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 2.3e-42 176.4 168 61.3
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.0e-42 176.0 161 62.7
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 3.9e-42 175.6 218 55.0
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 5.1e-42 175.3 163 62.0
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 6.6e-42 174.9 160 62.5
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 6.6e-42 174.9 192 53.6
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 6.6e-42 174.9 163 63.2
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 8.7e-42 174.5 202 54.0
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 8.7e-42 174.5 160 65.0
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 8.7e-42 174.5 193 56.0
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 1.1e-41 174.1 220 53.2
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 1.1e-41 174.1 220 53.2
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 1.1e-41 174.1 163 62.6
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 1.1e-41 174.1 194 54.6
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.5e-41 173.7 170 58.2
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 1.9e-41 173.3 154 66.2
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.9e-41 173.3 174 58.6
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 2.5e-41 172.9 163 63.2
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 2.5e-41 172.9 216 50.0
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 3.3e-41 172.6 170 61.2
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 3.3e-41 172.6 161 65.2
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.3e-41 172.6 193 55.4
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 4.3e-41 172.2 198 55.1
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 4.3e-41 172.2 163 63.2
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 5.6e-41 171.8 169 56.8
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 7.3e-41 171.4 163 62.0
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 7.3e-41 171.4 166 60.8
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 9.6e-41 171.0 160 63.8
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 9.6e-41 171.0 165 63.6
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.3e-40 170.6 206 53.9
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 1.6e-40 170.2 161 64.0
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 1.6e-40 170.2 178 60.1
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 2.1e-40 169.9 182 58.8
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 2.1e-40 169.9 160 63.8
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 2.1e-40 169.9 160 63.8
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 2.8e-40 169.5 205 53.7
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 2.8e-40 169.5 203 53.2
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 2.8e-40 169.5 161 64.0
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 2.8e-40 169.5 106 84.0
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 3.6e-40 169.1 106 85.8
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 4.8e-40 168.7 169 57.4
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 8.1e-40 167.9 161 64.0
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 1.1e-39 167.5 107 84.1
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.1e-39 167.5 107 81.3
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 1.1e-39 167.5 107 81.3
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.1e-39 167.5 163 60.1
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 1.4e-39 167.2 177 57.6
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.8e-39 166.8 106 84.9
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 2.4e-39 166.4 170 59.4
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 4.0e-39 165.6 107 83.2
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 4.0e-39 165.6 184 54.3
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 6.9e-39 164.9 165 61.2
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 1.2e-38 164.1 164 59.1
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 2.0e-38 163.3 106 81.1
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 2.0e-38 163.3 104 82.7
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 2.0e-38 163.3 162 60.5
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 7.6e-38 161.4 194 56.7
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 3.8e-37 159.1 220 48.2
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 8.4e-37 157.9 170 58.8
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 1.4e-36 157.1 108 79.6
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 5.4e-36 155.2 184 52.7
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 1.6e-35 153.7 106 75.5
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 2.1e-35 153.3 170 53.5
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 2.7e-35 152.9 161 54.7
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 1.7e-34 150.2 198 51.0
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 2.3e-34 149.8 171 52.6
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 5.1e-34 148.7 173 54.9
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 1.3e-32 144.1 140 61.4
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 2.1e-32 143.3 186 50.0
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 3.6e-32 142.5 160 50.6
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.5e-30 137.1 160 53.8
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 4.5e-30 135.6 104 69.2
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 5.8e-30 135.2 209 45.9
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.3e-29 134.0 104 70.2
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 6.4e-29 131.7 166 52.4
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 1.9e-28 130.2 137 55.5
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 1.3e-26 124.0 131 57.3
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 1.5e-25 120.6 105 60.0
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 5.6e-25 118.6 176 47.2
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 2.1e-24 116.7 153 49.7
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 6.2e-24 115.2 86 72.1
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 8.1e-24 114.8 87 73.6
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 4.0e-23 112.5 94 70.2
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 9.0e-23 111.3 87 72.4
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 2.6e-22 109.8 94 69.1
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 2.6e-22 109.8 94 69.1
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 4.9e-21 105.5 170 45.9
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 1.4e-20 104.0 106 54.7
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 8.7e-18 94.7 143 47.6
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.6e-16 90.5 140 44.3
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 6.9e-15 85.1 108 49.1
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 2.7e-11 73.2 49 77.6
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 2.7e-11 73.2 67 58.2
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 2.7e-11 73.2 43 86.0
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.0e-10 71.2 49 79.6
CARHR238500 Cardamine hirsuta HOM05D004106 ORTHO05D116395 2.6e-06 56.6 40 67.5


User provided reference genes

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