Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 1.4e-76 289.7 153 100.0
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 2.6e-59 232.3 153 85.0
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 6.3e-58 227.6 153 82.4
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 5.9e-56 221.1 153 81.0
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 6.5e-55 217.6 153 79.7
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 8.5e-55 217.2 153 79.7
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 8.5e-55 217.2 153 79.7
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 8.5e-55 217.2 153 79.7
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 8.5e-55 217.2 153 79.7
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 4.2e-54 214.9 153 79.1
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 1.0e-52 210.3 153 79.1
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 1.0e-52 210.3 153 79.1
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 6.3e-50 201.1 159 71.7
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 5.4e-49 198.0 154 74.0
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 1.2e-48 196.8 154 74.0
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 4.5e-48 194.9 155 74.8
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 7.7e-48 194.1 154 74.0
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 7.2e-46 187.6 154 68.2
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 1.5e-43 179.9 153 69.3
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 7.5e-43 177.6 154 68.8
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 2.8e-42 175.6 157 67.5
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 2.8e-42 175.6 152 65.1
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 1.4e-41 173.3 152 65.1
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 1.4e-41 173.3 153 66.0
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.8e-41 172.9 146 67.1
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 4.1e-41 171.8 149 63.8
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 4.1e-41 171.8 153 68.0
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 3.5e-40 168.7 151 66.9
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 5.9e-40 167.9 152 65.1
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.0e-39 167.2 153 68.0
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.3e-39 166.8 151 64.9
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 2.3e-39 166.0 144 66.0
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 3.8e-39 165.2 126 71.4
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 5.0e-39 164.9 152 61.8
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 6.6e-39 164.5 152 66.4
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 8.6e-39 164.1 152 66.4
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 1.1e-38 163.7 152 64.5
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 1.1e-38 163.7 151 63.6
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 1.9e-38 162.9 151 62.3
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 2.5e-38 162.5 126 70.6
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 3.3e-38 162.2 146 65.8
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 3.3e-38 162.2 151 65.6
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 1.2e-37 160.2 152 65.8
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 1.2e-37 160.2 138 66.7
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.6e-37 159.8 146 62.3
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 2.8e-37 159.1 146 65.1
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 3.6e-37 158.7 154 62.3
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 3.6e-37 158.7 150 63.3
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 6.1e-37 157.9 151 62.3
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 1.4e-36 156.8 151 62.9
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 1.8e-36 156.4 146 63.7
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.3e-36 156.0 138 65.2
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.3e-36 156.0 126 68.3
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.0e-36 155.2 151 61.6
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 4.0e-36 155.2 151 61.6
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 4.0e-36 155.2 153 60.8
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 5.2e-36 154.8 153 61.4
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 6.8e-36 154.5 151 61.6
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 6.8e-36 154.5 150 62.7
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 2.0e-35 152.9 151 58.9
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 3.4e-35 152.1 150 60.7
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 7.5e-35 151.0 147 60.5
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 1.3e-34 150.2 144 63.2
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.3e-34 150.2 151 59.6
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 3.7e-34 148.7 158 60.1
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 6.4e-34 147.9 132 63.6
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 8.3e-34 147.5 151 60.3
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 8.3e-34 147.5 149 61.7
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.1e-33 147.1 154 59.1
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 1.4e-33 146.7 151 59.6
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 1.8e-33 146.4 151 59.6
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 2.4e-33 146.0 127 66.9
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 7.0e-33 144.4 145 58.6
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 9.2e-33 144.1 150 54.7
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.6e-32 143.3 148 56.8
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 4.6e-32 141.7 146 59.6
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 5.9e-32 141.4 142 59.2
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 1.0e-31 140.6 125 63.2
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 1.3e-31 140.2 149 57.0
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 1.3e-31 140.2 112 68.8
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 3.0e-31 139.0 155 57.4
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 3.0e-31 139.0 153 56.9
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 3.9e-31 138.7 137 59.1
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 3.9e-31 138.7 149 53.7
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 3.9e-31 138.7 151 57.0
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 3.9e-31 138.7 149 55.0
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 1.1e-30 137.1 142 63.4
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.5e-30 136.0 115 67.8
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 2.5e-30 136.0 151 54.3
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 3.3e-30 135.6 148 54.1
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 3.3e-30 135.6 148 54.1
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 4.3e-30 135.2 155 57.4
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 5.6e-30 134.8 141 58.9
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 7.3e-30 134.4 148 53.4
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.2e-29 133.7 112 70.5
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 1.2e-29 133.7 148 54.1
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 1.2e-29 133.7 148 54.1
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 1.6e-29 133.3 148 54.1
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 6.2e-29 131.3 152 57.9
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 4.4e-27 125.2 78 83.3
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 1.3e-26 123.6 83 84.3
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 6.4e-26 121.3 127 60.6
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 6.4e-26 121.3 79 81.0
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.1e-25 120.6 68 91.2
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 2.4e-25 119.4 155 52.9
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 3.2e-25 119.0 67 91.0
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 5.4e-25 118.2 136 53.7
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 4.6e-24 115.2 126 56.3
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.3e-23 113.6 147 53.1
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 1.4e-20 103.6 108 61.1
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 1.5e-19 100.1 224 39.3
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 2.9e-18 95.9 73 69.9
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 1.1e-17 94.0 88 60.2
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 3.2e-17 92.4 67 71.6
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 7.1e-17 91.3 56 85.7
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 2.1e-16 89.7 145 41.4
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 2.7e-16 89.4 87 56.3
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 3.5e-16 89.0 128 50.8
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 1.5e-11 73.6 83 49.4
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.0e-11 73.2 111 45.9
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.7e-10 70.1 62 61.3
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 3.2e-09 65.9 89 48.3
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 7.8e-08 61.2 61 50.8
Sed0004136 Sechium edule HOM05D006256 ORTHO05D007833 2.3e-07 59.7 91 49.5
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 3.0e-07 59.3 48 75.0
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 1.5e-06 57.0 64 46.9


User provided reference genes

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