Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G1190 Aethionema arabicum HOM05D008842 ORTHO05D010931 8.5e-104 380.6 223 100.0
Carub.0001s1647 Capsella rubella HOM05D008842 ORTHO05D010931 1.4e-66 256.9 217 72.4
Sp1g14880 Schrenkiella parvula HOM05D008842 ORTHO05D010931 1.4e-66 256.9 222 72.5
Thhalv10008754m.g Eutrema salsugineum HOM05D008842 ORTHO05D010931 7.8e-65 251.1 216 72.2
AL1G28900 Arabidopsis lyrata HOM05D008842 ORTHO05D010931 3.9e-64 248.8 218 71.6
CARHR017190 Cardamine hirsuta HOM05D008842 ORTHO05D010931 3.9e-64 248.8 223 72.2
AT1G16730 Arabidopsis thaliana HOM05D008842 ORTHO05D010931 6.6e-56 221.5 218 67.9
BcaB03g13035 Brassica carinata HOM05D008842 ORTHO05D010931 4.9e-51 205.3 203 70.4
A08p31310 Brassica napus HOM05D008842 ORTHO05D010931 5.6e-47 191.8 204 66.2
BraA08t35054Z Brassica rapa HOM05D008842 ORTHO05D010931 1.4e-45 187.2 205 63.4
THA.LOC104812345 Tarenaya hassleriana HOM05D008842 ORTHO05D010931 3.6e-38 162.5 201 50.2
BcaC07g38810 Brassica carinata HOM05D008842 ORTHO05D010931 1.5e-36 157.1 109 78.0
QL05p085140 Quercus lobata HOM05D008842 ORTHO05D010931 1.1e-29 134.4 126 57.1
Gohir.D05G117500 Gossypium hirsutum HOM05D008842 ORTHO05D010931 9.0e-29 131.3 129 56.6
Gorai.009G121400 Gossypium raimondii HOM05D008842 ORTHO05D010931 9.0e-29 131.3 129 56.6
Gohir.A05G116600 Gossypium hirsutum HOM05D008842 ORTHO05D010931 2.0e-28 130.2 129 56.6
Thecc.06G049500 Theobroma cacao HOM05D008842 ORTHO05D010931 5.8e-28 128.6 128 57.8
Duzib235G0617 Durio zibethinus HOM05D008842 ORTHO05D010931 9.9e-28 127.9 126 56.3
EL10Ac8g19754 Beta vulgaris HOM05D008842 ORTHO05D010931 1.3e-27 127.5 229 48.5
Ciclev10029553m.g Citrus clementina HOM05D008842 ORTHO05D010931 2.4e-26 123.2 130 54.6
Cfa002161 Carpinus fangiana HOM05D008842 ORTHO05D010931 7.9e-25 118.2 130 52.3
COL.COLO4_26810 Corchorus olitorius HOM05D008842 ORTHO05D010931 5.1e-24 115.5 122 53.3
Haze_16245 Corylus avellana HOM05D008842 ORTHO05D010931 2.5e-23 113.2 132 50.8
CiPaw.01G092500 Carya illinoinensis HOM05D008842 ORTHO05D010931 9.0e-21 104.8 126 44.4
GSVIVG01029445001 Vitis vinifera HOM05D008842 ORTHO05D010931 2.0e-20 103.6 202 37.1
CANSAT01G2106 Cannabis sativa HOM05D008842 ORTHO05D010931 2.2e-19 100.1 86 59.3
SEGI_26270 Sequoiadendron giganteum HOM05D008842 ORTHO05D010931 8.4e-19 98.2 229 36.2
MD04G1031600 Malus domestica HOM05D008842 ORTHO05D010931 1.9e-18 97.1 71 60.6
Ah.09g232810 Amaranthus hybridus HOM05D008842 ORTHO05D010931 1.2e-17 94.4 118 44.9
AUR62027592 Chenopodium quinoa HOM05D008842 ORTHO05D010931 1.6e-17 94.0 70 61.4
SEGI_04041 Sequoiadendron giganteum HOM05D008842 ORTHO05D010931 1.6e-17 94.0 140 42.1
ATR0626G313 Amborella trichopoda HOM05D008842 ORTHO05D010931 2.7e-17 93.2 123 41.5
FAN14G1571 Fragaria x ananassa HOM05D008842 ORTHO05D010931 1.8e-16 90.5 177 34.5
FAN14G3737 Fragaria x ananassa HOM05D008842 ORTHO05D010931 1.8e-16 90.5 177 34.5
FvH4_6g36360 Fragaria vesca HOM05D008842 ORTHO05D010931 2.5e-15 86.7 177 41.8
FAN02G3250 Fragaria x ananassa HOM05D008842 ORTHO05D010931 6.2e-14 82.0 150 44.0
FAN09G2833 Fragaria x ananassa HOM05D008842 ORTHO05D010931 2.4e-13 80.1 148 43.2
C08p17520 Brassica napus HOM05D008842 ORTHO05D010931 1.0e-11 74.7 117 43.6
BolC8t49378H Brassica oleracea HOM05D008842 ORTHO05D010931 1.0e-11 74.7 117 43.6
Sc05g0006440 Simmondsia chinensis HOM05D008842 ORTHO05D010931 1.0e-11 74.7 115 40.0
Potri.007G003700 Populus trichocarpa HOM05D008842 ORTHO05D010931 2.5e-10 70.1 123 36.6


User provided reference genes

Program Settings