Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 6.1e-267 923.7 507 100.0
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 1.7e-200 703.0 511 75.5
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 9.3e-199 697.2 512 76.4
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 6.0e-198 694.5 516 74.6
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 4.3e-196 688.3 510 73.7
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 3.8e-192 675.2 511 76.3
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 8.4e-192 674.1 511 72.8
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 8.2e-179 630.9 518 71.2
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 1.1e-175 620.5 512 69.7
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 4.2e-175 618.6 514 70.0
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 7.2e-175 617.8 516 71.5
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 9.4e-175 617.5 516 71.5
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 1.0e-173 614.0 512 69.1
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 6.5e-168 594.7 509 64.8
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 7.4e-164 581.3 508 62.0
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 1.7e-163 580.1 509 68.4
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 2.4e-162 576.2 508 63.6
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 3.1e-162 575.9 507 64.9
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 5.9e-161 571.6 511 63.0
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 4.2e-159 565.5 511 65.6
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 2.1e-158 563.1 508 60.8
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 3.6e-158 562.4 509 59.7
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 3.6e-158 562.4 512 62.5
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 4.7e-158 562.0 504 60.7
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 1.8e-157 560.1 510 62.9
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 9.7e-156 554.3 506 60.3
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 9.7e-156 554.3 508 60.8
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 1.3e-155 553.9 508 59.8
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 2.8e-155 552.7 508 60.8
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 2.8e-155 552.7 509 60.1
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 3.7e-155 552.4 508 61.6
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 3.7e-155 552.4 518 58.5
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 6.3e-155 551.6 509 62.1
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 8.3e-155 551.2 508 60.2
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 1.4e-154 550.4 509 61.1
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 2.4e-154 549.7 517 60.5
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 3.1e-154 549.3 508 59.3
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 9.1e-154 547.7 515 61.9
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 7.7e-153 544.7 512 60.4
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 7.7e-153 544.7 512 60.4
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 7.7e-153 544.7 509 62.1
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 2.2e-152 543.1 507 57.4
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 3.8e-152 542.3 511 60.3
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 5.0e-152 542.0 510 58.2
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 6.5e-152 541.6 510 62.5
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 1.1e-151 540.8 507 59.2
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 1.1e-151 540.8 508 60.2
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 1.1e-151 540.8 508 62.4
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 3.2e-151 539.3 509 60.7
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 4.2e-151 538.9 504 60.7
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 5.5e-151 538.5 510 56.5
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 7.2e-151 538.1 505 61.4
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 7.2e-151 538.1 505 59.6
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 2.1e-150 536.6 509 61.3
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 6.1e-150 535.0 510 58.0
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 6.1e-150 535.0 521 60.7
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 8.0e-150 534.6 507 62.5
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.0e-149 534.3 508 57.7
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 3.4e-148 529.3 508 57.9
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 1.8e-146 523.5 511 57.7
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 2.0e-145 520.0 499 56.9
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 4.5e-145 518.8 508 57.1
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 5.9e-145 518.5 508 56.3
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 1.7e-144 516.9 505 56.6
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 6.6e-144 515.0 509 57.2
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 1.2e-142 510.8 518 55.8
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 1.6e-142 510.4 525 58.1
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 1.6e-142 510.4 508 54.5
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 2.8e-142 509.6 508 57.1
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 3.6e-142 509.2 513 54.8
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 2.3e-141 506.5 524 59.5
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 2.0e-140 503.4 521 53.9
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 4.4e-140 502.3 508 57.1
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 4.4e-140 502.3 523 53.3
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 9.8e-140 501.1 530 55.7
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 2.2e-139 500.0 505 57.4
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 4.9e-139 498.8 510 54.9
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 1.4e-138 497.3 555 51.5
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 9.2e-138 494.6 512 55.9
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 1.6e-137 493.8 538 53.5
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 2.0e-137 493.4 509 53.0
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.7e-136 490.3 514 57.0
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 1.8e-133 480.3 513 53.6
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 4.4e-132 475.7 526 52.3
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 1.3e-131 474.2 532 51.5
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 5.6e-127 458.8 548 49.6
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 7.3e-127 458.4 509 52.8
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 3.6e-126 456.1 528 49.2
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 4.1e-122 442.6 412 56.1
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 1.0e-120 438.0 359 62.1
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.1e-119 434.5 510 52.4
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 1.3e-112 411.0 525 48.2
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 5.8e-108 395.6 370 61.9
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 3.8e-107 392.9 506 50.2
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 4.6e-105 386.0 373 60.9
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 4.3e-103 379.4 532 42.5
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 7.3e-95 352.1 524 41.4
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.7e-91 340.9 341 57.8
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.3e-88 331.3 508 42.9
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 2.7e-81 307.0 593 37.6
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 4.6e-73 279.6 363 51.5
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 6.7e-64 249.2 368 48.9
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 2.0e-60 237.7 190 65.8
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 1.7e-51 208.0 566 32.5
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 2.8e-38 164.1 199 49.2
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 2.5e-34 151.0 147 56.5
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 2.1e-25 121.3 106 54.7
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.7e-22 111.7 294 34.0
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.6e-20 105.1 148 42.6
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 7.5e-15 86.3 372 26.9
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 1.2e-07 62.4 61 52.5
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 3.4e-07 60.8 49 59.2
DCAR_017762 Daucus carota HOM05D004574 ORTHO05D005612 1.3e-06 58.9 74 41.9
Sabra06G0145700 Salix brachista HOM05D004574 ORTHO05D005612 1.3e-06 58.9 71 45.1
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 2.2e-06 58.2 64 48.4
HanXRQChr12g0357011 Helianthus annuus HOM05D004574 ORTHO05D005612 2.9e-06 57.8 57 49.1
Cre07.g355700 Chlamydomonas reinhardtii HOM05D007019 ORTHO05D008398 3.7e-06 57.4 256 29.3
Lalb_Chr12g0198521 Lupinus albus HOM05D004574 ORTHO05D005612 3.7e-06 57.4 76 42.1
Nitab4.5_0001151g0100 Nicotiana tabacum HOM05D004574 ORTHO05D005612 4.9e-06 57.0 72 43.1
Nitab4.5_0001671g0130 Nicotiana tabacum HOM05D004574 ORTHO05D005612 4.9e-06 57.0 100 37.0
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 6.4e-06 56.6 55 47.3
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 8.3e-06 56.2 61 45.9
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 8.3e-06 56.2 73 41.1


User provided reference genes

Program Settings