Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 5.8e-69 264.2 146 100.0
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 1.2e-50 203.4 148 81.8
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 1.2e-50 203.4 148 81.8
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 4.6e-50 201.4 148 80.4
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 4.6e-50 201.4 148 80.4
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.3e-49 199.9 148 79.7
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.1e-48 196.8 148 78.4
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 4.3e-48 194.9 142 80.3
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 2.1e-47 192.6 144 79.9
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 2.8e-47 192.2 147 79.6
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 4.8e-47 191.4 145 79.3
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 6.2e-47 191.0 144 79.2
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 3.1e-46 188.7 148 77.0
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 1.4e-38 163.3 146 70.5
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 1.4e-35 153.3 151 64.9
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 1.8e-33 146.4 149 63.8
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.3e-33 146.0 151 60.3
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.3e-33 146.0 151 60.3
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 2.3e-33 146.0 155 63.9
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 2.3e-33 146.0 154 61.7
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 3.9e-33 145.2 101 84.2
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 5.1e-33 144.8 153 62.1
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 5.1e-33 144.8 146 62.3
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 6.7e-33 144.4 146 62.3
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 1.1e-32 143.7 155 64.5
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 1.5e-32 143.3 149 65.8
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.9e-32 142.9 149 63.1
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 3.3e-32 142.1 149 61.7
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 3.3e-32 142.1 150 63.3
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 9.7e-32 140.6 116 72.4
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 9.7e-32 140.6 152 62.5
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 1.3e-31 140.2 147 61.9
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.3e-31 140.2 99 84.8
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.7e-31 139.8 112 73.2
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 2.2e-31 139.4 155 60.0
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 2.8e-31 139.0 150 60.0
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 3.7e-31 138.7 146 61.6
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 4.8e-31 138.3 101 79.2
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 6.3e-31 137.9 149 60.4
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 8.2e-31 137.5 116 72.4
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 8.2e-31 137.5 107 77.6
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 8.2e-31 137.5 143 60.1
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 8.2e-31 137.5 141 61.0
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.1e-30 137.1 153 60.8
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 1.1e-30 137.1 135 65.2
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 1.1e-30 137.1 100 82.0
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.4e-30 136.7 100 81.0
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 1.8e-30 136.3 146 64.4
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 2.4e-30 136.0 117 68.4
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 2.4e-30 136.0 142 63.4
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 2.4e-30 136.0 99 80.8
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 4.1e-30 135.2 151 62.9
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 6.9e-30 134.4 102 80.4
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 6.9e-30 134.4 139 63.3
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 6.9e-30 134.4 119 69.7
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.2e-29 133.7 141 63.1
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.2e-29 133.7 100 79.0
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 1.2e-29 133.7 100 80.0
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.2e-29 133.7 111 71.2
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.5e-29 133.3 102 77.5
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 2.0e-29 132.9 103 77.7
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 2.6e-29 132.5 108 59.3
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 2.6e-29 132.5 143 62.9
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 4.5e-29 131.7 156 56.4
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 5.9e-29 131.3 119 67.2
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 5.9e-29 131.3 121 71.1
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 7.7e-29 131.0 101 80.2
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 7.7e-29 131.0 143 61.5
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.0e-28 130.6 98 77.6
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.3e-28 130.2 106 77.4
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 1.3e-28 130.2 155 59.4
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.3e-28 130.2 119 68.1
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 1.7e-28 129.8 103 76.7
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 2.2e-28 129.4 118 68.6
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 6.5e-28 127.9 109 71.6
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 6.5e-28 127.9 110 71.8
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 6.5e-28 127.9 113 71.7
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 8.5e-28 127.5 139 60.4
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 8.5e-28 127.5 70 78.6
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 1.9e-27 126.3 118 66.9
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 1.9e-27 126.3 106 69.8
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 1.9e-27 126.3 136 59.6
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 2.5e-27 125.9 99 77.8
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 4.2e-27 125.2 105 73.3
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 5.5e-27 124.8 100 74.0
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 5.5e-27 124.8 114 54.4
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 1.6e-26 123.2 104 75.0
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 2.1e-26 122.9 108 73.1
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 2.7e-26 122.5 137 59.1
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 2.7e-26 122.5 108 70.4
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 2.7e-26 122.5 108 70.4
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 4.7e-26 121.7 97 75.3
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 6.1e-26 121.3 96 77.1
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 3.0e-25 119.0 135 60.0
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.5e-24 116.7 91 79.1
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 1.5e-24 116.7 98 73.5
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 1.1e-22 110.5 120 65.8
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 5.3e-22 108.2 77 83.1
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 7.0e-22 107.8 95 70.5
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 1.3e-20 103.6 115 58.3
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 1.1e-19 100.5 84 76.2
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 4.2e-19 98.6 77 77.9
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 7.2e-19 97.8 83 71.1
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 3.9e-17 92.0 73 75.3
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 2.0e-08 63.2 41 68.3


User provided reference genes

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