Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 5.1e-122 441.0 217 100.0
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 2.3e-90 335.9 209 78.9
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 9.8e-89 330.5 209 79.4
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 2.2e-88 329.3 206 78.6
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 4.9e-88 328.2 215 76.3
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 6.4e-88 327.8 215 76.3
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 6.4e-88 327.8 213 77.5
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 2.4e-87 325.9 209 77.5
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 8.6e-85 317.4 205 75.6
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 2.0e-81 306.2 206 75.2
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 1.9e-79 299.7 214 72.0
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 1.5e-76 290.0 218 67.4
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 1.6e-75 286.6 206 67.5
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 3.6e-75 285.4 207 69.1
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 4.7e-75 285.0 205 65.4
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 1.4e-74 283.5 207 68.1
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 1.8e-74 283.1 208 68.3
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 3.1e-74 282.3 205 66.8
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 4.0e-74 282.0 210 67.1
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 1.5e-73 280.0 199 68.8
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 1.5e-73 280.0 212 65.6
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 1.5e-73 280.0 208 65.4
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 2.0e-73 279.6 207 66.2
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 3.4e-73 278.9 211 64.0
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 5.8e-73 278.1 207 65.7
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 5.8e-73 278.1 205 65.9
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 7.5e-73 277.7 215 62.8
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.3e-72 276.9 199 66.8
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 2.2e-72 276.2 210 62.9
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 2.9e-72 275.8 210 63.8
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 2.9e-72 275.8 207 65.2
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 4.9e-72 275.0 206 63.6
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 4.9e-72 275.0 206 64.1
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 4.9e-72 275.0 205 63.4
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 8.3e-72 274.2 199 65.8
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 1.1e-71 273.9 200 64.5
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 1.4e-71 273.5 209 62.7
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 1.4e-71 273.5 209 62.7
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 1.9e-71 273.1 205 65.4
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 1.9e-71 273.1 207 62.8
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 2.4e-71 272.7 199 65.8
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 4.1e-71 271.9 210 62.4
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 4.1e-71 271.9 205 62.9
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 5.4e-71 271.6 198 66.7
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 9.2e-71 270.8 204 64.2
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 1.2e-70 270.4 205 62.4
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 2.1e-70 269.6 205 63.4
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 4.6e-70 268.5 202 66.3
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 4.6e-70 268.5 209 61.7
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 4.6e-70 268.5 201 66.7
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 7.8e-70 267.7 211 62.1
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 1.3e-69 266.9 205 62.4
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 2.3e-69 266.2 208 61.5
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 5.1e-69 265.0 206 61.7
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 5.6e-68 261.5 201 64.7
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 5.6e-68 261.5 207 60.9
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 9.5e-68 260.8 207 62.3
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 9.5e-68 260.8 208 61.5
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 9.5e-68 260.8 217 59.0
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 1.2e-67 260.4 208 60.6
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 2.8e-67 259.2 199 62.8
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 2.8e-67 259.2 205 62.0
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 3.6e-67 258.8 208 60.1
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 2.3e-66 256.1 198 65.7
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 1.2e-65 253.8 205 58.0
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 1.2e-65 253.8 229 55.5
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 4.4e-65 251.9 200 57.5
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 1.3e-64 250.4 208 56.7
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 2.4e-63 246.1 207 58.9
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 2.4e-63 246.1 206 56.8
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 2.1e-62 243.0 168 64.3
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 2.3e-61 239.6 236 50.8
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 2.3e-61 239.6 197 59.4
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 5.1e-61 238.4 207 55.6
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 1.1e-60 237.3 158 69.0
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 1.5e-60 236.9 204 55.9
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 3.3e-60 235.7 179 64.8
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 5.6e-60 235.0 199 57.8
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.6e-59 233.4 198 57.6
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 1.5e-57 226.9 178 60.7
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 1.1e-55 220.7 157 65.0
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 2.8e-51 206.1 209 50.7
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 3.6e-51 205.7 203 51.2
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 4.9e-48 195.3 153 61.4
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 1.9e-44 183.3 197 45.7
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 4.3e-44 182.2 126 66.7
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 4.3e-44 182.2 126 66.7
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 3.5e-38 162.5 166 48.8
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 1.1e-36 157.5 208 43.3
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 1.5e-36 157.1 128 57.0
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 9.6e-36 154.5 207 40.6
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 9.6e-36 154.5 136 58.8
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.6e-35 153.7 201 38.8
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 6.2e-35 151.8 143 54.5
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 1.8e-34 150.2 197 38.6
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 5.3e-34 148.7 180 45.6
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 6.5e-32 141.7 134 56.7
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 1.4e-31 140.6 150 53.3
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 9.6e-28 127.9 135 48.1
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 1.7e-24 117.1 96 59.4
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 6.5e-24 115.2 64 76.6
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 1.9e-20 103.6 157 39.5
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.9e-20 103.6 184 37.5
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.0e-16 91.3 121 44.6
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 6.5e-16 88.6 202 32.2
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 8.5e-16 88.2 73 61.6
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 2.5e-15 86.7 158 35.4
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 3.6e-14 82.8 81 51.9
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 4.6e-14 82.4 74 51.4
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 1.0e-13 81.3 109 45.9
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 2.3e-13 80.1 81 50.6
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 5.7e-12 75.5 62 56.5
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 1.2e-09 67.8 38 71.1
AagrBONN_evm.TU.Sc2ySwM_362.2804 Anthoceros agrestis HOM05D006956 ORTHO05D008824 5.5e-07 58.9 63 46.0


User provided reference genes

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