Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.1e-189 666.4 312 100.0
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 4.3e-162 574.7 312 84.0
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 1.6e-161 572.8 312 84.6
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 3.6e-161 571.6 312 83.3
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 4.4e-159 564.7 312 82.7
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 2.9e-158 562.0 312 82.7
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 3.2e-157 558.5 310 82.3
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 7.8e-156 553.9 309 81.6
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 6.9e-152 540.8 312 79.5
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 1.5e-151 539.7 312 78.5
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 2.6e-151 538.9 312 79.5
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 5.8e-151 537.7 312 79.5
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 7.6e-151 537.3 312 79.5
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 8.4e-142 507.3 312 76.0
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 6.7e-139 497.7 301 71.8
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 6.7e-139 497.7 301 72.1
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 6.2e-137 491.1 305 71.8
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 1.1e-136 490.3 314 70.1
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.1e-136 490.3 305 71.5
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 1.8e-136 489.6 314 68.8
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 4.0e-136 488.4 308 68.2
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 1.2e-135 486.9 307 67.8
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 1.2e-135 486.9 307 68.7
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 1.5e-135 486.5 306 67.6
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 2.6e-135 485.7 305 70.2
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 7.6e-135 484.2 308 69.5
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 1.0e-134 483.8 302 70.9
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.9e-134 482.3 307 68.1
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.8e-134 481.9 309 69.3
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 3.8e-134 481.9 302 68.2
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 4.9e-134 481.5 302 69.5
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 8.4e-134 480.7 305 68.2
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 1.1e-133 480.3 305 68.2
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 3.2e-133 478.8 302 68.2
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 4.2e-133 478.4 309 69.3
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 4.2e-133 478.4 308 69.2
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 7.1e-133 477.6 303 68.6
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 9.3e-133 477.2 305 68.9
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.2e-132 476.9 306 69.3
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 3.5e-132 475.3 304 68.8
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 3.5e-132 475.3 304 68.8
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 4.6e-132 474.9 310 68.1
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 4.6e-132 474.9 302 68.9
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 4.6e-132 474.9 302 67.9
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 6.0e-132 474.6 309 67.3
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 6.0e-132 474.6 303 68.3
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 6.0e-132 474.6 302 67.9
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 1.0e-131 473.8 306 67.6
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 1.3e-131 473.4 306 67.0
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 1.8e-131 473.0 308 65.6
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.8e-131 473.0 304 68.1
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 1.8e-131 473.0 302 67.9
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.8e-131 473.0 308 68.8
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 1.8e-131 473.0 302 67.2
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 2.3e-131 472.6 303 68.0
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 3.0e-131 472.2 308 67.2
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 5.1e-131 471.5 308 67.2
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 6.7e-131 471.1 302 67.5
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 6.7e-131 471.1 306 67.3
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 6.7e-131 471.1 308 65.3
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 8.7e-131 470.7 304 68.1
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 1.1e-130 470.3 307 66.8
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 1.1e-130 470.3 307 67.1
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.1e-130 470.3 302 68.5
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.9e-130 469.5 304 66.4
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.9e-130 469.5 309 67.6
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.5e-130 469.2 306 68.0
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 2.5e-130 469.2 302 68.5
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.3e-130 468.4 305 66.6
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 4.3e-130 468.4 304 67.4
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 4.3e-130 468.4 308 67.9
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 5.7e-130 468.0 305 67.2
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 5.7e-130 468.0 308 66.2
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 7.4e-130 467.6 306 65.4
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 7.4e-130 467.6 301 67.8
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 7.4e-130 467.6 305 67.2
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 9.6e-130 467.2 305 66.6
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 1.3e-129 466.8 307 66.8
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 1.3e-129 466.8 307 66.4
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 4.8e-129 464.9 306 66.3
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 4.8e-129 464.9 306 65.4
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 4.8e-129 464.9 308 67.5
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 8.2e-129 464.2 308 65.3
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.1e-128 463.8 302 67.5
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.4e-128 463.4 306 65.4
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.4e-128 463.4 306 64.7
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.1e-128 462.2 299 69.2
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 3.1e-128 462.2 302 67.5
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 3.1e-128 462.2 309 67.3
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 5.3e-128 461.5 300 66.7
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 5.3e-128 461.5 302 67.2
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 5.3e-128 461.5 307 65.5
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.0e-128 460.7 308 65.6
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.0e-128 460.7 308 65.6
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 1.2e-127 460.3 305 65.6
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 1.2e-127 460.3 306 65.0
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 2.6e-127 459.1 305 65.9
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 2.6e-127 459.1 302 65.9
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 3.4e-127 458.8 302 67.2
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 5.9e-127 458.0 301 66.4
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 1.0e-126 457.2 308 64.0
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.0e-126 457.2 302 65.9
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 1.3e-126 456.8 308 65.3
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 1.7e-126 456.4 308 64.9
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 1.7e-126 456.4 308 65.9
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 2.2e-126 456.1 305 65.6
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 2.9e-126 455.7 302 63.6
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 3.8e-126 455.3 306 65.4
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 5.0e-126 454.9 302 66.2
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 1.4e-125 453.4 305 65.2
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 3.2e-125 452.2 302 63.9
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 7.2e-125 451.1 305 64.6
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 2.1e-124 449.5 308 64.6
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 3.6e-124 448.7 306 63.7
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.1e-124 448.0 304 64.8
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 3.9e-123 445.3 301 63.1
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 2.5e-122 442.6 306 66.3
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.3e-122 442.2 304 65.5
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.3e-122 441.8 292 65.8
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.4e-120 436.8 302 62.9
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 3.4e-119 432.2 306 63.7
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 3.6e-116 422.2 282 66.7
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 6.1e-116 421.4 268 67.9
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 7.9e-116 421.0 274 67.5
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.0e-115 420.6 311 60.1
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.3e-115 419.5 274 67.5
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 6.7e-115 417.9 302 61.6
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.2e-111 407.1 307 57.7
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 5.5e-109 398.3 285 62.1
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 1.2e-108 397.1 305 57.7
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.0e-107 394.0 311 56.3
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 3.3e-106 389.0 301 58.1
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 5.3e-104 381.7 309 59.2
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 5.3e-104 381.7 309 59.2
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 1.6e-100 370.2 303 53.5
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 2.1e-100 369.8 305 55.4
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 8.2e-97 357.8 300 57.0
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.2e-95 354.0 307 51.8
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 3.2e-93 345.9 213 70.9
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 1.2e-92 344.0 222 66.2
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 5.7e-90 335.1 309 50.5
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 5.7e-90 335.1 306 51.0
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 4.3e-77 292.4 265 54.0
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 9.2e-72 274.6 173 70.5
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 7.0e-64 248.4 298 43.6
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.0e-59 232.6 249 49.0
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.9e-48 197.2 127 68.5
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.8e-43 180.6 107 71.0
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.2e-42 177.9 308 35.7
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.2e-42 177.9 122 60.7
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 1.1e-35 154.8 324 30.6
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 1.0e-30 138.3 235 35.7
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 1.5e-29 134.4 330 28.5
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 5.6e-29 132.5 99 57.6
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.2e-12 77.4 51 62.7
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 3.8e-09 66.6 75 44.0


User provided reference genes

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