Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 5.4e-189 664.1 312 100.0
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 1.1e-165 586.6 312 86.5
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 6.0e-164 580.9 309 85.8
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 7.3e-162 573.9 312 84.6
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.2e-161 573.2 312 84.0
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 1.2e-161 573.2 312 84.6
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 1.5e-159 566.2 310 83.5
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 2.6e-159 565.5 312 83.0
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 2.3e-155 552.4 312 81.1
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 5.1e-155 551.2 312 81.4
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 5.1e-155 551.2 312 81.4
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 6.6e-155 550.8 312 81.4
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 1.6e-153 546.2 312 80.1
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 5.6e-146 521.2 312 78.2
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 2.4e-141 505.8 303 72.6
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 9.3e-141 503.8 303 72.3
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 3.5e-140 501.9 308 70.8
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 4.6e-140 501.5 306 73.5
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 2.3e-139 499.2 305 72.8
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 3.9e-139 498.4 303 71.6
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 5.1e-139 498.0 303 70.3
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 1.1e-138 496.9 308 72.4
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 5.6e-138 494.6 307 69.1
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 5.6e-138 494.6 315 70.8
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 1.3e-137 493.4 303 71.9
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 2.8e-137 492.3 315 69.5
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 3.7e-137 491.9 303 70.0
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 8.1e-137 490.7 307 69.7
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 1.4e-136 490.0 303 71.3
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 1.8e-136 489.6 303 71.3
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 2.4e-136 489.2 315 68.9
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 4.0e-136 488.4 315 70.2
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 6.9e-136 487.6 303 71.0
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 6.9e-136 487.6 307 71.3
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.2e-135 486.9 303 70.6
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 1.2e-135 486.9 308 69.8
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 2.6e-135 485.7 316 69.0
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.6e-135 485.7 305 71.5
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 5.8e-135 484.6 303 71.3
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 5.8e-135 484.6 302 69.9
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 5.8e-135 484.6 306 70.3
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 7.6e-135 484.2 303 70.0
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.0e-134 483.8 303 70.6
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.3e-134 483.4 309 68.6
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.3e-134 483.4 307 70.0
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 1.3e-134 483.4 303 69.3
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.7e-134 483.0 303 69.0
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 1.7e-134 483.0 302 70.2
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.7e-134 483.0 303 71.0
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 2.9e-134 482.3 303 69.3
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 3.8e-134 481.9 308 68.8
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 4.9e-134 481.5 305 69.2
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 4.9e-134 481.5 307 68.7
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 4.9e-134 481.5 315 69.2
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 6.5e-134 481.1 303 69.0
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 6.5e-134 481.1 305 69.2
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 6.5e-134 481.1 305 69.2
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 6.5e-134 481.1 316 67.7
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 8.4e-134 480.7 303 70.6
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.1e-133 480.3 305 69.5
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.4e-133 479.9 303 68.6
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 1.4e-133 479.9 310 68.7
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.9e-133 479.6 308 69.2
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 1.9e-133 479.6 303 71.3
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 2.5e-133 479.2 303 70.6
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 3.2e-133 478.8 301 68.1
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 3.2e-133 478.8 303 70.0
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 3.2e-133 478.8 303 70.3
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 4.2e-133 478.4 303 69.6
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 4.2e-133 478.4 309 68.9
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 4.2e-133 478.4 303 67.7
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 5.5e-133 478.0 303 69.0
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 5.5e-133 478.0 304 68.1
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 5.5e-133 478.0 315 66.7
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 5.5e-133 478.0 303 69.6
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 7.1e-133 477.6 308 66.9
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 7.1e-133 477.6 303 70.3
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 7.1e-133 477.6 303 70.3
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 9.3e-133 477.2 303 70.6
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.6e-132 476.5 303 69.6
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 1.6e-132 476.5 303 68.3
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 1.6e-132 476.5 306 67.0
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.1e-132 476.1 306 69.0
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 4.6e-132 474.9 301 68.8
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 7.9e-132 474.2 303 67.7
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 7.9e-132 474.2 317 66.9
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 1.8e-131 473.0 315 66.0
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 2.3e-131 472.6 309 68.6
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.0e-131 472.2 308 68.8
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 3.9e-131 471.9 308 67.2
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 6.7e-131 471.1 307 68.7
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 8.7e-131 470.7 297 71.0
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.1e-130 470.3 302 68.9
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 1.5e-130 469.9 317 66.6
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 1.5e-130 469.9 308 67.5
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 2.5e-130 469.2 308 67.9
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 7.4e-130 467.6 309 66.7
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 7.4e-130 467.6 307 68.4
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 7.4e-130 467.6 306 68.0
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 6.3e-129 464.5 301 67.8
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 6.3e-129 464.5 303 67.0
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 8.2e-129 464.2 303 68.0
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 1.1e-128 463.8 307 67.4
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.8e-128 463.0 304 67.4
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 2.6e-127 459.1 306 66.7
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 2.6e-127 459.1 303 68.3
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 3.4e-127 458.8 306 66.3
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.4e-127 458.8 303 66.7
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.4e-127 458.8 303 66.7
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 3.4e-127 458.8 303 65.7
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 5.9e-127 458.0 303 66.0
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 2.2e-126 456.1 308 64.3
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.9e-125 453.0 304 66.8
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 9.3e-125 450.7 303 66.0
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 1.2e-124 450.3 302 65.9
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 7.9e-124 447.6 305 63.3
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 7.9e-124 447.6 304 65.5
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 7.9e-124 447.6 306 67.0
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 7.4e-122 441.0 292 66.1
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.2e-121 439.5 303 64.4
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 8.2e-121 437.6 314 62.1
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 9.0e-120 434.1 306 64.7
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 5.9e-119 431.4 274 69.3
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.7e-118 429.9 274 69.3
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 1.9e-117 426.4 269 68.0
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 1.4e-115 420.2 282 66.7
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 1.8e-115 419.9 303 61.7
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 1.1e-114 417.2 308 61.4
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.3e-113 413.7 307 59.0
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 1.0e-110 404.1 302 60.9
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.7e-110 403.3 311 57.6
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.1e-108 394.8 307 61.9
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 6.1e-108 394.8 307 61.9
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.0e-107 394.0 285 62.1
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 7.4e-106 387.9 302 58.6
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 2.2e-102 376.3 304 54.9
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 2.6e-98 362.8 302 54.6
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 6.3e-97 358.2 309 54.7
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 8.5e-94 347.8 301 56.8
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 4.2e-93 345.5 303 52.8
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 1.8e-91 340.1 221 67.4
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 5.2e-91 338.6 213 67.6
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 2.5e-77 293.1 265 53.6
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 1.6e-71 273.9 172 72.7
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 3.7e-65 252.7 299 43.8
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.4e-59 234.2 249 49.0
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 6.4e-49 198.7 308 39.0
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 8.4e-49 198.4 127 70.9
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 3.1e-43 179.9 122 60.7
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.4e-42 176.4 105 73.3
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 3.2e-40 169.9 305 34.1
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 1.7e-33 147.5 236 37.3
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 9.3e-32 141.7 342 29.5
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 2.5e-29 133.7 99 58.6
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.8e-12 77.0 46 71.7
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 6.9e-11 72.4 75 49.3


User provided reference genes

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