Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G10930 Aethionema arabicum HOM05D000234 ORTHO05D000335 1.8e-34 148.7 73 100.0
Aa31LG7G10910 Aethionema arabicum HOM05D000234 ORTHO05D000335 2.3e-26 121.7 72 84.7
Aa31LG7G10940 Aethionema arabicum HOM05D000234 ORTHO05D000335 1.2e-19 99.4 67 74.6
CARHR030750 Cardamine hirsuta HOM05D000234 ORTHO05D000335 6.1e-11 70.5 58 63.8
AL1G49770 Arabidopsis lyrata HOM05D000234 ORTHO05D000335 3.1e-10 68.2 58 63.8
AT1G31280 Arabidopsis thaliana HOM05D000234 ORTHO05D000335 3.1e-10 68.2 58 63.8
COL.COLO4_20190 Corchorus olitorius HOM05D000234 ORTHO05D000335 3.1e-10 68.2 59 57.6
Thhalv10006643m.g Eutrema salsugineum HOM05D000234 ORTHO05D000335 3.1e-10 68.2 58 63.8
Sp1g27100 Schrenkiella parvula HOM05D000234 ORTHO05D000335 3.1e-10 68.2 58 63.8
BcaC06g35332 Brassica carinata HOM05D000234 ORTHO05D000335 4.0e-10 67.8 58 63.8
A09p34960 Brassica napus HOM05D000234 ORTHO05D000335 4.0e-10 67.8 58 63.8
C05p30470 Brassica napus HOM05D000234 ORTHO05D000335 4.0e-10 67.8 58 63.8
C07p17300 Brassica napus HOM05D000234 ORTHO05D000335 4.0e-10 67.8 58 63.8
BraA09t39027Z Brassica rapa HOM05D000234 ORTHO05D000335 4.0e-10 67.8 58 63.8
BcaB02g10962 Brassica carinata HOM05D000234 ORTHO05D000335 1.5e-09 65.9 58 60.3
THA.LOC104798616 Tarenaya hassleriana HOM05D000234 ORTHO05D000335 1.5e-09 65.9 58 58.6
BcaB07g32789 Brassica carinata HOM05D000234 ORTHO05D000335 2.0e-09 65.5 58 63.8
A05p18710 Brassica napus HOM05D000234 ORTHO05D000335 3.4e-09 64.7 58 58.6
BraA05t20765Z Brassica rapa HOM05D000234 ORTHO05D000335 3.4e-09 64.7 58 58.6
Carub.0001s2971 Capsella rubella HOM05D000234 ORTHO05D000335 3.4e-09 64.7 58 62.1
Carub.0001s2972 Capsella rubella HOM05D000234 ORTHO05D000335 3.4e-09 64.7 58 60.3
Aa31LG2G14600 Aethionema arabicum HOM05D000234 ORTHO05D000335 4.4e-09 64.3 63 60.3
BcaC08g44027 Brassica carinata HOM05D000234 ORTHO05D000335 1.3e-08 62.8 58 58.6
C06p14370 Brassica napus HOM05D000234 ORTHO05D000335 1.3e-08 62.8 58 58.6
BolC6t36616H Brassica oleracea HOM05D000234 ORTHO05D000335 1.3e-08 62.8 58 58.6
Actinidia22377 Actinidia chinensis HOM05D000234 ORTHO05D000335 2.2e-08 62.0 58 53.4
Ca_11351_v3 Cicer arietinum L. HOM05D000234 ORTHO05D000335 1.4e-07 59.3 59 55.9
Dinv11861 Davidia involucrata HOM05D000234 ORTHO05D000335 1.4e-07 59.3 59 50.8
Atru.chr10.596 Acer truncatum HOM05D000234 ORTHO05D000335 3.2e-07 58.2 62 50.0
Cpa.g.sc135.40 Carica papaya HOM05D000234 ORTHO05D000335 4.1e-07 57.8 48 54.2
Duzib235G1469 Durio zibethinus HOM05D000234 ORTHO05D000335 4.1e-07 57.8 59 52.5
Gohir.D06G147400 Gossypium hirsutum HOM05D000234 ORTHO05D000335 4.1e-07 57.8 59 54.2
CiPaw.10G066000 Carya illinoinensis HOM05D000234 ORTHO05D000335 5.4e-07 57.4 59 54.2
Duzib235G0982 Durio zibethinus HOM05D000234 ORTHO05D000335 5.4e-07 57.4 61 50.8
Glyma.20G022900 Glycine max HOM05D000234 ORTHO05D000335 5.4e-07 57.4 59 54.2
Psat1g169880 Pisum sativum HOM05D000234 ORTHO05D000335 5.4e-07 57.4 59 54.2
Eucgr.D00106 Eucalyptus grandis HOM05D000234 ORTHO05D000335 9.2e-07 56.6 59 52.5
Gohir.A06G140700 Gossypium hirsutum HOM05D000234 ORTHO05D000335 9.2e-07 56.6 59 54.2
Gorai.010G171800 Gossypium raimondii HOM05D000234 ORTHO05D000335 9.2e-07 56.6 59 52.5
VMungo0540G0788 Vigna mungo HOM05D000234 ORTHO05D000335 9.2e-07 56.6 59 54.2
arahy.Tifrunner.gnm1.ann1.M7MYIY Arachis hypogaea HOM05D000234 ORTHO05D000335 1.2e-06 56.2 58 53.4
Eucgr.D01097 Eucalyptus grandis HOM05D000234 ORTHO05D000335 1.2e-06 56.2 59 50.8
Medtr2g028910 Medicago truncatula HOM05D000234 ORTHO05D000335 1.2e-06 56.2 58 53.4
Phvul.006G131700 Phaseolus vulgaris HOM05D000234 ORTHO05D000335 1.2e-06 56.2 59 52.5
PGR083G1759 Punica granatum HOM05D000234 ORTHO05D000335 1.2e-06 56.2 59 52.5
SalBow8G0274 Salvia bowleyana HOM05D000234 ORTHO05D000335 1.2e-06 56.2 44 61.4
CSS0023206 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 1.6e-06 55.8 58 50.0
Duzib192G0161 Durio zibethinus HOM05D000234 ORTHO05D000335 1.6e-06 55.8 59 50.8
TWI63G1642 Tripterygium wilfordii HOM05D000234 ORTHO05D000335 1.6e-06 55.8 60 51.7
Cfa000905 Carpinus fangiana HOM05D000234 ORTHO05D000335 2.0e-06 55.5 59 50.8
TWI38G0717 Tripterygium wilfordii HOM05D000234 ORTHO05D000335 2.0e-06 55.5 59 49.2
Haze_05654 Corylus avellana HOM05D000234 ORTHO05D000335 2.7e-06 55.1 63 52.4
Lj1C1142T12 Lonicera japonica HOM05D000234 ORTHO05D000335 2.7e-06 55.1 59 47.5
Ciclev10014144m.g Citrus clementina HOM05D000234 ORTHO05D000335 3.5e-06 54.7 44 61.4
Dinv11858 Davidia involucrata HOM05D000234 ORTHO05D000335 4.6e-06 54.3 59 49.2
Lalb_Chr09g0328791 Lupinus albus HOM05D000234 ORTHO05D000335 4.6e-06 54.3 59 49.2
Lalb_Chr15g0088591 Lupinus albus HOM05D000234 ORTHO05D000335 4.6e-06 54.3 58 51.7
Dinv11860 Davidia involucrata HOM05D000234 ORTHO05D000335 6.0e-06 53.9 59 49.2
Migut.M01964 Erythranthe guttata HOM05D000234 ORTHO05D000335 6.0e-06 53.9 59 50.8
TPR.G17524 Trifolium pratense HOM05D000234 ORTHO05D000335 6.0e-06 53.9 58 53.4
CSS0022104 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 7.8e-06 53.5 59 50.8
CSS0024752 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 7.8e-06 53.5 59 50.8
CSS0034476 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 7.8e-06 53.5 59 50.8
CSS0034580 Camellia sinensis var. sinensis HOM05D000234 ORTHO05D000335 7.8e-06 53.5 59 50.8
Medtr4g083610 Medicago truncatula HOM05D000234 ORTHO05D000335 7.8e-06 53.5 59 52.5
Rhsim03G0243400 Rhododendron simsii HOM05D000234 ORTHO05D000335 7.8e-06 53.5 59 49.2
Thecc.06G137600 Theobroma cacao HOM05D000234 ORTHO05D000335 7.8e-06 53.5 44 63.6


User provided reference genes

Program Settings