Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 2.0e-250 868.6 427 100.0
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 3.6e-167 592.0 428 71.0
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 6.5e-161 571.2 426 68.5
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 1.6e-146 523.5 403 66.5
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 8.5e-145 517.7 433 63.3
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 1.3e-137 493.8 439 61.0
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 2.5e-128 463.0 449 56.8
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 1.7e-124 450.3 446 56.5
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 2.7e-122 443.0 447 56.2
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 1.6e-119 433.7 438 55.5
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 2.1e-119 433.3 438 55.3
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 3.6e-119 432.6 438 55.3
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 7.3e-104 381.7 426 50.0
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 4.0e-102 375.9 429 49.0
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 5.2e-102 375.6 439 47.4
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 1.5e-101 374.0 422 47.9
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 6.4e-100 368.6 420 50.7
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 1.4e-99 367.5 432 47.0
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 3.2e-99 366.3 438 47.3
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 3.9e-97 359.4 423 49.2
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 5.1e-97 359.0 448 44.9
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 1.1e-96 357.8 438 46.1
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 2.5e-96 356.7 460 46.5
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 9.5e-96 354.8 440 45.5
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.8e-95 353.2 420 47.9
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 8.1e-95 351.7 439 46.5
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.4e-94 350.9 439 45.8
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 5.8e-93 345.5 434 44.9
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 2.2e-92 343.6 440 47.0
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 3.8e-92 342.8 422 46.7
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 8.4e-92 341.7 430 44.0
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 2.4e-91 340.1 469 42.2
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 2.1e-90 337.0 425 45.2
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 1.0e-89 334.7 426 45.1
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 3.9e-89 332.8 431 42.9
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 8.7e-89 331.6 424 46.7
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 1.5e-88 330.9 428 46.0
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 1.9e-88 330.5 420 45.0
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 1.9e-88 330.5 420 45.0
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 2.5e-88 330.1 427 46.1
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 5.6e-88 328.9 433 43.0
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 2.1e-87 327.0 416 46.4
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 4.8e-87 325.9 417 44.1
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 1.8e-86 323.9 443 42.0
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 1.8e-86 323.9 433 43.2
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 4.0e-86 322.8 423 44.0
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.2e-85 321.2 416 43.8
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 2.0e-85 320.5 436 43.1
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.0e-85 320.5 427 45.0
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 1.3e-84 317.8 417 44.8
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.3e-84 317.8 423 42.8
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 1.7e-84 317.4 399 43.6
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 1.7e-84 317.4 463 41.7
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 6.4e-84 315.5 428 43.7
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 8.4e-84 315.1 447 42.7
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 9.3e-83 311.6 428 44.2
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 1.7e-81 307.4 425 42.4
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 2.3e-81 307.0 415 42.7
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 6.6e-81 305.4 418 40.9
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 8.7e-81 305.1 439 40.5
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.5e-80 304.3 432 43.8
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 4.3e-80 302.8 414 42.8
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 5.6e-80 302.4 428 41.8
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 9.6e-80 301.6 439 41.5
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 2.1e-79 300.4 422 41.9
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 2.1e-79 300.4 438 42.0
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 1.1e-78 298.1 443 41.8
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 1.4e-78 297.7 433 41.6
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 6.9e-78 295.4 451 41.7
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 9.0e-78 295.0 435 42.3
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 7.6e-77 292.0 426 40.1
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 1.3e-76 291.2 420 41.7
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 6.0e-74 282.3 434 38.9
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 6.0e-74 282.3 398 44.5
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 6.7e-73 278.9 403 41.4
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 8.7e-73 278.5 464 39.0
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 7.4e-72 275.4 232 62.9
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 4.8e-71 272.7 434 39.6
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 9.0e-70 268.5 413 40.2
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 1.3e-68 264.6 160 76.9
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 1.3e-68 264.6 424 40.3
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 4.6e-66 256.1 425 36.2
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.8e-65 254.2 409 37.4
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 3.1e-62 243.4 207 61.8
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 2.5e-59 233.8 261 46.7
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 9.3e-59 231.9 226 52.2
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 1.3e-57 228.0 430 37.7
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 1.8e-57 227.6 434 37.3
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 8.7e-57 225.3 273 46.5
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 1.9e-56 224.2 530 31.3
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 6.9e-54 215.7 205 52.2
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 9.0e-54 215.3 430 35.6
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 2.0e-53 214.2 443 33.0
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 7.7e-53 212.2 240 46.2
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 1.5e-48 198.0 323 39.6
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 6.3e-47 192.6 144 59.0
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 7.7e-45 185.7 141 60.3
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.0e-44 185.3 144 57.6
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 1.3e-44 184.9 420 32.6
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 1.9e-43 181.0 326 38.7
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 1.1e-38 165.2 320 37.5
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 9.1e-38 162.2 204 42.2
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 1.0e-36 158.7 478 27.4
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 2.2e-36 157.5 130 57.7
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 2.9e-36 157.1 125 56.0
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.1e-35 155.2 211 38.9
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 1.1e-35 155.2 211 38.9
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.7e-34 150.6 153 51.6
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 3.6e-34 150.2 410 31.2
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 8.0e-34 149.1 153 51.0
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 7.4e-32 142.5 142 54.2
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 4.1e-30 136.7 295 33.9
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 1.2e-29 135.2 177 45.8
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 2.6e-29 134.0 180 45.6
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 1.7e-28 131.3 259 39.4
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 2.9e-28 130.6 182 43.4
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 2.9e-28 130.6 151 41.7
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 5.0e-28 129.8 171 43.3
SEGI_07598 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 1.9e-27 127.9 158 41.1
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 2.6e-24 117.5 163 45.4
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 2.2e-23 114.4 132 49.2
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 4.8e-23 113.2 295 32.9
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 2.0e-21 107.8 340 28.5
Mapoly0096s0044 Marchantia polymorpha HOM05D005804 ORTHO05D006849 4.5e-21 106.7 134 36.6
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 1.4e-17 95.1 109 49.5
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 1.8e-17 94.7 92 50.0
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 1.2e-16 92.0 116 42.2
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 1.2e-16 92.0 125 41.6
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 1.8e-14 84.7 143 38.5
Potri.015G096700 Populus trichocarpa HOM05D005804 ORTHO05D006849 7.0e-14 82.8 242 30.6
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 4.4e-08 63.5 66 47.0
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 9.8e-08 62.4 130 35.4
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 1.7e-07 61.6 168 31.0


User provided reference genes

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