Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G10360 Aethionema arabicum HOM05D001358 ORTHO05D059257 2.8e-139 498.8 289 100.0
Aa31LG7G10330 Aethionema arabicum HOM05D001358 ORTHO05D001154 7.5e-28 128.6 132 59.1
Aa31sc16G260 Aethionema arabicum HOM05D001358 ORTHO05D001154 8.9e-21 105.1 218 37.6
Carub.0007s2737 Capsella rubella HOM05D001358 ORTHO05D001154 6.0e-17 92.4 162 38.9
AT4G14770 Arabidopsis thaliana HOM05D001358 ORTHO05D001154 1.7e-16 90.9 161 37.9
Aa31LG9G2600 Aethionema arabicum HOM05D001358 ORTHO05D001154 3.3e-15 86.7 312 30.8
Sp7g12900 Schrenkiella parvula HOM05D001358 ORTHO05D001154 7.3e-15 85.5 161 36.6
Thhalv10024624m.g Eutrema salsugineum HOM05D001358 ORTHO05D001154 6.2e-14 82.4 303 28.1
AL7G41150 Arabidopsis lyrata HOM05D001358 ORTHO05D001154 5.2e-13 79.3 148 38.5
BraA01t02192Z Brassica rapa HOM05D001358 ORTHO05D001154 6.8e-13 79.0 210 34.3
A01p22800 Brassica napus HOM05D001358 ORTHO05D001154 1.2e-12 78.2 210 34.3
C01p28370 Brassica napus HOM05D001358 ORTHO05D001154 2.0e-12 77.4 207 31.9
BcaNung00335 Brassica carinata HOM05D001358 ORTHO05D001154 2.6e-12 77.0 177 33.9
BolC1t02766H Brassica oleracea HOM05D001358 ORTHO05D001154 2.6e-12 77.0 209 33.5
Thhalv10020373m.g Eutrema salsugineum HOM05D001358 ORTHO05D001154 2.4e-10 70.5 107 43.9
CARHR221300 Cardamine hirsuta HOM05D001358 ORTHO05D001154 3.2e-10 70.1 151 33.1
CARHR216030 Cardamine hirsuta HOM05D001358 ORTHO05D001154 2.3e-08 63.9 122 36.9
Sp3g20475 Schrenkiella parvula HOM05D001358 ORTHO05D001154 3.0e-08 63.5 170 32.9
AT3G22760 Arabidopsis thaliana HOM05D001358 ORTHO05D001154 3.9e-08 63.2 155 31.6
THA.LOC104827552 Tarenaya hassleriana HOM05D001358 ORTHO05D001154 1.1e-07 61.6 112 39.3
AL3G37090 Arabidopsis lyrata HOM05D001358 ORTHO05D001154 1.5e-07 61.2 149 32.9
THA.LOC104803136 Tarenaya hassleriana HOM05D001358 ORTHO05D001154 1.9e-07 60.8 112 37.5
AL3G37100 Arabidopsis lyrata HOM05D001358 ORTHO05D001154 2.5e-07 60.5 129 36.4
AT3G22780 Arabidopsis thaliana HOM05D001358 ORTHO05D001154 2.5e-07 60.5 129 37.2
BcaC09g49193 Brassica carinata HOM05D001358 ORTHO05D001154 2.5e-07 60.5 177 31.1
C01p41620 Brassica napus HOM05D001358 ORTHO05D001154 2.5e-07 60.5 177 31.1
BolC1t04111H Brassica oleracea HOM05D001358 ORTHO05D001154 2.5e-07 60.5 177 31.1
CARHR098620 Cardamine hirsuta HOM05D001358 ORTHO05D001154 2.5e-07 60.5 141 36.2
BraA01t03376Z Brassica rapa HOM05D001358 ORTHO05D001154 4.3e-07 59.7 159 32.7
Carub.0003s2289 Capsella rubella HOM05D001358 ORTHO05D001154 5.6e-07 59.3 174 31.0
MD16G1197800 Malus domestica HOM05D001358 ORTHO05D001154 9.6e-07 58.5 185 29.2
BcaB06g26391 Brassica carinata HOM05D001358 ORTHO05D001154 1.6e-06 57.8 193 31.6
A01p32460 Brassica napus HOM05D001358 ORTHO05D001154 2.1e-06 57.4 160 31.9
SHI00498 Sapria himalayana HOM05D001358 ORTHO05D001154 2.8e-06 57.0 166 28.9
Glyma.01G236300 Glycine max HOM05D001358 ORTHO05D001154 3.6e-06 56.6 182 28.0
Prupe.1G019100 Prunus persica HOM05D001358 ORTHO05D001154 4.8e-06 56.2 172 29.7
Manes.03G174900 Manihot esculenta HOM05D001358 ORTHO05D001154 8.1e-06 55.5 129 31.8


User provided reference genes

Program Settings