Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 5.4e-57 224.2 119 100.0
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 4.9e-50 201.1 119 87.4
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 1.1e-49 199.9 119 87.4
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 9.3e-49 196.8 119 84.9
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.2e-48 196.4 119 84.9
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 1.6e-48 196.1 119 84.9
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 2.1e-48 195.7 119 84.0
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 2.1e-48 195.7 119 84.0
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 2.1e-48 195.7 119 84.0
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 2.1e-48 195.7 119 84.0
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 2.1e-48 195.7 119 84.0
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 1.0e-47 193.4 119 84.9
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 3.9e-47 191.4 117 83.8
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 7.3e-46 187.2 119 79.8
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 2.4e-41 172.2 103 84.5
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 7.1e-41 170.6 113 77.9
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 6.0e-40 167.5 112 76.8
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 7.9e-40 167.2 112 76.8
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.3e-39 166.4 112 75.9
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 1.8e-39 166.0 112 75.9
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 2.3e-39 165.6 113 77.0
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 3.0e-39 165.2 111 75.7
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 3.9e-39 164.9 115 73.0
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 5.1e-39 164.5 111 75.7
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 8.7e-39 163.7 179 54.2
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 1.1e-38 163.3 113 73.5
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 1.5e-38 162.9 111 74.8
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 1.9e-38 162.5 113 74.3
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 1.9e-38 162.5 113 75.2
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 3.3e-38 161.8 113 73.5
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 4.3e-38 161.4 110 75.5
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 4.3e-38 161.4 110 75.5
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 7.4e-38 160.6 113 73.5
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 9.6e-38 160.2 110 77.3
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 9.6e-38 160.2 110 75.5
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.3e-37 159.8 110 76.4
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 2.1e-37 159.1 114 73.7
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 2.8e-37 158.7 113 75.2
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 2.8e-37 158.7 110 74.5
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 2.8e-37 158.7 113 71.7
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 2.8e-37 158.7 110 74.5
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 2.8e-37 158.7 110 74.5
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 3.7e-37 158.3 113 74.3
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 3.7e-37 158.3 112 72.3
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 6.2e-37 157.5 107 75.7
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 8.1e-37 157.1 113 69.9
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 1.1e-36 156.8 108 70.4
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 1.1e-36 156.8 110 70.9
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 1.1e-36 156.8 108 74.1
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 1.4e-36 156.4 111 73.9
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 2.4e-36 155.6 113 71.7
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 2.4e-36 155.6 113 69.0
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 5.3e-36 154.5 110 74.5
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 5.3e-36 154.5 112 69.6
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 6.9e-36 154.1 110 70.9
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 9.0e-36 153.7 113 70.8
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 9.0e-36 153.7 108 75.9
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 2.0e-35 152.5 115 68.7
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 2.0e-35 152.5 110 72.7
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 2.0e-35 152.5 110 70.0
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 3.4e-35 151.8 99 77.8
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 3.4e-35 151.8 113 69.9
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 5.8e-35 151.0 110 70.9
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 5.8e-35 151.0 110 73.6
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 7.6e-35 150.6 113 68.1
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 7.6e-35 150.6 110 70.0
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 1.0e-34 150.2 109 69.7
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 1.7e-34 149.4 113 68.1
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 2.2e-34 149.1 110 71.8
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 2.9e-34 148.7 108 72.2
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 3.8e-34 148.3 110 69.1
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 4.9e-34 147.9 113 62.8
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 4.9e-34 147.9 113 68.1
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.4e-33 146.4 110 70.0
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 2.5e-33 145.6 110 70.0
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 4.2e-33 144.8 104 71.2
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 7.1e-33 144.1 110 69.1
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 2.7e-32 142.1 108 68.5
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 3.5e-32 141.7 110 67.3
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 1.3e-31 139.8 102 69.6
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 1.3e-31 139.8 116 62.9
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 3.0e-31 138.7 110 67.3
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 1.1e-30 136.7 111 66.7
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 3.3e-30 135.2 113 62.8
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 2.1e-29 132.5 105 65.7
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 6.2e-29 131.0 134 57.5
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 6.2e-29 131.0 84 78.6
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 6.9e-28 127.5 117 60.7
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 9.0e-28 127.1 99 67.7
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.5e-27 126.3 82 78.0
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 3.4e-27 125.2 82 76.8
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 3.4e-27 125.2 82 79.3
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 3.4e-27 125.2 89 71.9
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 7.6e-27 124.0 80 80.0
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.0e-26 123.6 85 72.9
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 1.7e-26 122.9 87 71.3
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 1.7e-26 122.9 85 71.8
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 3.8e-26 121.7 107 57.9
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 3.2e-25 118.6 82 73.2
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 4.2e-25 118.2 83 72.3
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 5.5e-25 117.9 85 68.2
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 7.2e-25 117.5 82 73.2
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 2.1e-24 115.9 83 68.7
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 4.6e-24 114.8 84 70.2
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 6.1e-24 114.4 118 55.9
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.0e-23 113.6 88 70.5
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.0e-23 112.1 79 73.4
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 6.9e-20 100.9 70 72.9
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 1.7e-18 96.3 103 56.3
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 2.9e-18 95.5 79 63.3
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 1.9e-17 92.8 114 50.0
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 4.2e-17 91.7 64 73.4
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 4.2e-17 91.7 109 54.1
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 2.5e-14 82.4 51 80.4
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 5.7e-14 81.3 52 78.8
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 1.4e-12 76.6 59 67.8
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 1.2e-11 73.6 118 40.7
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 8.5e-10 67.4 60 63.3


User provided reference genes

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