Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 9.4e-104 380.2 189 100.0
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 4.0e-46 188.7 181 61.3
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 1.2e-45 187.2 176 61.9
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 3.5e-42 175.6 175 59.4
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 3.9e-41 172.2 186 59.7
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 5.6e-40 168.3 175 58.3
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 6.4e-36 154.8 174 55.7
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 6.4e-36 154.8 174 55.7
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 7.1e-35 151.4 173 55.5
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 2.1e-34 149.8 139 64.7
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.6e-31 140.2 183 48.6
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.5e-29 133.7 175 52.0
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 7.9e-26 121.3 190 44.7
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.5e-24 117.1 186 41.9
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.5e-24 117.1 186 45.7
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 4.3e-24 115.5 187 42.8
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 4.3e-24 115.5 195 39.5
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 2.1e-23 113.2 178 44.9
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 1.4e-22 110.5 188 42.0
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.8e-22 110.2 184 42.9
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 2.4e-22 109.8 178 45.5
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 2.4e-22 109.8 187 43.3
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 5.3e-22 108.6 211 38.4
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 5.3e-22 108.6 168 43.5
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 1.5e-21 107.1 183 40.4
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 2.0e-21 106.7 178 41.6
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 2.6e-21 106.3 191 40.3
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 4.5e-21 105.5 174 42.0
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 4.5e-21 105.5 174 42.0
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.5e-21 105.5 184 42.4
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 5.8e-21 105.1 173 43.9
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 7.6e-21 104.8 186 41.9
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 9.9e-21 104.4 186 41.9
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 9.9e-21 104.4 179 41.9
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.3e-20 104.0 188 38.8
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.7e-20 103.6 173 39.9
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 1.7e-20 103.6 181 40.9
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 2.2e-20 103.2 173 40.5
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 3.8e-20 102.4 202 37.6
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 6.4e-20 101.7 186 40.9
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 8.4e-20 101.3 173 39.9
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 1.4e-19 100.5 198 39.9
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.4e-19 100.5 173 39.9
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.4e-19 100.5 192 39.1
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 2.5e-19 99.8 167 41.3
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 2.5e-19 99.8 184 41.8
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.2e-19 99.0 173 39.3
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 7.1e-19 98.2 182 38.5
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 9.3e-19 97.8 186 37.6
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.2e-18 97.4 180 38.3
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 2.1e-18 96.7 189 37.6
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 2.1e-18 96.7 183 38.3
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 3.5e-18 95.9 166 42.2
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 4.6e-18 95.5 203 35.5
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 7.9e-18 94.7 199 37.2
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.0e-17 94.4 174 40.2
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 5.1e-17 92.0 168 42.3
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 6.7e-17 91.7 168 44.0
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 1.5e-16 90.5 168 43.5
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 1.9e-16 90.1 175 37.1
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 2.5e-16 89.7 184 37.5
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 4.3e-16 89.0 194 38.1
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 4.3e-16 89.0 189 37.6
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 5.6e-16 88.6 207 36.7
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 7.4e-16 88.2 189 37.0
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 9.6e-16 87.8 168 36.9
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 3.7e-15 85.9 207 36.2
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 3.7e-15 85.9 185 34.6
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 3.7e-15 85.9 179 35.2
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 6.2e-15 85.1 194 36.6
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 6.2e-15 85.1 161 40.4
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 6.2e-15 85.1 196 33.2
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 6.2e-15 85.1 169 36.7
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.4e-14 84.0 123 42.3
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 1.4e-14 84.0 170 36.5
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.8e-14 83.6 163 41.7
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 2.4e-14 83.2 211 37.4
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 3.1e-14 82.8 190 35.3
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 3.1e-14 82.8 202 32.2
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 5.3e-14 82.0 161 36.6
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 1.2e-13 80.9 233 32.6
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 2.0e-13 80.1 188 37.2
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 2.0e-13 80.1 221 30.8
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 2.0e-13 80.1 151 41.1
Lj1g0021904 Lotus japonicus HOM05D007182 ORTHO05D008919 3.8e-12 75.9 254 30.3
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 4.9e-12 75.5 175 33.1
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 6.5e-12 75.1 197 33.0
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 6.5e-12 75.1 128 39.8
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 9.3e-11 71.2 187 33.7
Ah.05g172700 Amaranthus hybridus HOM05D007182 ORTHO05D008919 1.6e-10 70.5 225 30.7
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 3.5e-10 69.3 178 36.0
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 3.5e-10 69.3 178 36.0
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 6.1e-10 68.6 116 44.8
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 3.0e-09 66.2 176 31.8
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 1.5e-08 63.9 182 30.8
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 1.9e-08 63.5 174 31.0
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 2.5e-08 63.2 142 31.7
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 1.6e-07 60.5 174 29.9
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 1.6e-07 60.5 174 29.9
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 2.2e-07 60.1 159 31.4
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 2.4e-06 56.6 144 32.6
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 4.1e-06 55.8 174 29.9
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 5.3e-06 55.5 184 34.2


User provided reference genes

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