Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 1.3e-70 269.6 135 100.0
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 1.7e-43 179.5 136 72.8
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 3.9e-43 178.3 132 75.0
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 8.6e-43 177.2 136 71.3
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 4.3e-42 174.9 136 71.3
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 7.3e-42 174.1 135 70.4
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 7.3e-42 174.1 135 70.4
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 2.1e-41 172.6 135 69.6
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 2.1e-41 172.6 135 69.6
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 3.6e-41 171.8 135 69.6
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 8.9e-40 167.2 135 67.4
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 2.4e-37 159.1 141 66.7
Thhalv10001838m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 3.2e-37 158.7 134 69.4
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 1.1e-32 143.7 138 63.8
CARHR260240 Cardamine hirsuta HOM05D007776 ORTHO05D009812 2.2e-30 136.0 136 59.6
BcaB01g02801 Brassica carinata HOM05D007776 ORTHO05D009812 1.3e-25 120.2 139 58.3
Sp6g08370 Schrenkiella parvula HOM05D007776 ORTHO05D009812 4.8e-25 118.2 138 55.1
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.1e-24 117.1 128 57.8
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 2.4e-24 115.9 142 57.0
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 5.3e-24 114.8 119 57.1
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.2e-23 113.6 128 56.2
A03p28480 Brassica napus HOM05D007776 ORTHO05D009812 1.5e-23 113.2 143 57.3
AL6G42920 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 2.0e-23 112.8 142 56.3
C03p34420 Brassica napus HOM05D007776 ORTHO05D009812 2.6e-23 112.5 142 56.3
BolC3t15751H Brassica oleracea HOM05D007776 ORTHO05D009812 2.6e-23 112.5 142 56.3
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 3.4e-23 112.1 129 56.6
BraA03t12053Z Brassica rapa HOM05D007776 ORTHO05D009812 4.5e-23 111.7 143 56.6
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 4.5e-23 111.7 129 55.0
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 4.5e-23 111.7 129 56.6
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 7.6e-23 110.9 135 51.1
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 7.6e-23 110.9 135 51.1
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 7.6e-23 110.9 131 51.9
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 1.3e-22 110.2 132 53.0
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 3.8e-22 108.6 137 51.1
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 6.4e-22 107.8 115 55.7
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 8.4e-22 107.5 111 56.8
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 4.2e-21 105.1 136 49.3
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 7.1e-21 104.4 138 47.8
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 3.5e-20 102.1 126 52.4
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 4.6e-20 101.7 124 56.5
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 6.0e-20 101.3 128 50.8
AT4G09170 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 1.3e-19 100.1 142 50.0
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 1.3e-19 100.1 135 48.9
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 2.5e-18 95.9 121 45.5
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 5.6e-18 94.7 130 44.6
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 7.4e-18 94.4 136 45.6
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 9.6e-18 94.0 127 49.6
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 2.8e-17 92.4 137 48.2
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 3.6e-17 92.0 133 47.4
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 3.6e-17 92.0 123 48.8
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 3.6e-17 92.0 133 47.4
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 4.8e-17 91.7 125 51.2
Medtr0045s0130 Medicago truncatula HOM05D007776 ORTHO05D009812 4.8e-17 91.7 125 47.2
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 4.8e-17 91.7 108 50.9
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 1.4e-16 90.1 137 45.3
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 1.8e-16 89.7 134 46.3
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 4.0e-16 88.6 136 46.3
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 6.9e-16 87.8 140 44.3
Lj3g0020626 Lotus japonicus HOM05D007776 ORTHO05D009812 2.0e-15 86.3 108 50.0
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 2.2e-14 82.8 112 49.1
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 1.1e-13 80.5 126 42.9
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 2.4e-13 79.3 122 42.6
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 3.2e-13 79.0 114 45.6
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 5.5e-13 78.2 104 46.2
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 9.3e-13 77.4 128 43.8
Ah.05g178510 Amaranthus hybridus HOM05D007776 ORTHO05D009812 1.6e-12 76.6 127 42.5
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 2.1e-12 76.3 135 43.0
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 2.1e-12 76.3 137 40.9
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 2.7e-12 75.9 128 43.0
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 6.0e-12 74.7 109 45.9
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 6.0e-12 74.7 109 44.0
Glyma.15G276200 Glycine max HOM05D007776 ORTHO05D009812 1.0e-11 73.9 86 53.5
Glyma.10G090400 Glycine max HOM05D007776 ORTHO05D009812 1.8e-11 73.2 107 44.9
TAR628G0395 Trochodendron aralioides HOM05D007776 ORTHO05D009812 1.9e-10 69.7 113 44.2
MD08G1218400 Malus domestica HOM05D007776 ORTHO05D009812 4.3e-10 68.6 98 48.0
Cc10_g10000 Coffea canephora HOM05D007776 ORTHO05D009812 1.3e-09 67.0 95 45.3
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 2.1e-09 66.2 102 47.1
EL10Ac1g00128 Beta vulgaris HOM05D007776 ORTHO05D009812 1.1e-08 63.9 130 36.9
Migut.C01313 Erythranthe guttata HOM05D007776 ORTHO05D009812 1.4e-08 63.5 122 40.2
COL.COLO4_25869 Corchorus olitorius HOM05D007776 ORTHO05D009812 3.8e-06 55.5 41 68.3


User provided reference genes

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