Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G8640 Aethionema arabicum HOM05D004555 ORTHO05D005305 1.5e-104 382.9 195 100.0
Carub.0001s3280 Capsella rubella HOM05D004555 ORTHO05D005305 8.3e-71 270.8 180 78.9
CARHR288350 Cardamine hirsuta HOM05D004555 ORTHO05D005305 1.2e-69 266.9 180 76.7
Sp1g29900 Schrenkiella parvula HOM05D004555 ORTHO05D005305 1.6e-69 266.5 180 77.8
AL1G49880 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 2.0e-69 266.2 180 77.2
BcaB03g13672 Brassica carinata HOM05D004555 ORTHO05D005305 3.5e-69 265.4 180 77.2
A05p23860 Brassica napus HOM05D004555 ORTHO05D005305 4.5e-69 265.0 180 77.8
BraA05t21262Z Brassica rapa HOM05D004555 ORTHO05D005305 4.5e-69 265.0 180 77.8
AT1G35180 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 5.9e-69 264.6 180 76.7
Thhalv10001837m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 2.3e-68 262.7 180 76.1
BcaC05g27748 Brassica carinata HOM05D004555 ORTHO05D005305 3.8e-68 261.9 180 76.7
C05p37330 Brassica napus HOM05D004555 ORTHO05D005305 3.8e-68 261.9 180 76.7
BolC5t32477H Brassica oleracea HOM05D004555 ORTHO05D005305 1.1e-67 260.4 180 77.2
BraA02t08192Z Brassica rapa HOM05D004555 ORTHO05D005305 2.1e-66 256.1 180 74.4
AT1G35170 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 3.6e-66 255.4 180 73.9
A02p31830 Brassica napus HOM05D004555 ORTHO05D005305 1.8e-65 253.1 180 73.3
THA.LOC104812564 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 1.2e-64 250.4 173 73.4
BcaB04g17579 Brassica carinata HOM05D004555 ORTHO05D005305 9.8e-64 247.3 180 69.4
Thhalv10011751m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 9.8e-64 247.3 180 68.9
Sp1g33840 Schrenkiella parvula HOM05D004555 ORTHO05D005305 9.8e-64 247.3 180 69.4
A08p06280 Brassica napus HOM05D004555 ORTHO05D005305 8.3e-63 244.2 181 68.0
BraA08t32631Z Brassica rapa HOM05D004555 ORTHO05D005305 8.3e-63 244.2 181 68.0
CARHR036190 Cardamine hirsuta HOM05D004555 ORTHO05D005305 1.1e-62 243.8 180 68.3
BcaC07g37280 Brassica carinata HOM05D004555 ORTHO05D005305 2.4e-62 242.7 181 67.4
C08p07100 Brassica napus HOM05D004555 ORTHO05D005305 2.4e-62 242.7 181 67.4
BolC8t47554H Brassica oleracea HOM05D004555 ORTHO05D005305 2.4e-62 242.7 181 67.4
THA.LOC104814152 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 1.6e-61 240.0 174 71.3
AL1G52650 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 3.0e-60 235.7 180 67.2
CANSAT25G0954 Cannabis sativa HOM05D004555 ORTHO05D005305 1.1e-59 233.8 180 66.7
Carub.0001s3550 Capsella rubella HOM05D004555 ORTHO05D005305 1.1e-59 233.8 180 66.7
AT1G45010 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 2.5e-59 232.6 180 66.1
BcaC03g17015 Brassica carinata HOM05D004555 ORTHO05D005305 3.3e-59 232.3 185 69.2
BolC2t11011H Brassica oleracea HOM05D004555 ORTHO05D005305 3.3e-59 232.3 185 69.2
QL02p009623 Quercus lobata HOM05D004555 ORTHO05D005305 1.6e-58 229.9 173 64.2
C02p49220 Brassica napus HOM05D004555 ORTHO05D005305 2.1e-58 229.6 185 68.1
Actinidia29807 Actinidia chinensis HOM05D004555 ORTHO05D005305 2.8e-58 229.2 173 65.9
Actinidia29808 Actinidia chinensis HOM05D004555 ORTHO05D005305 3.6e-58 228.8 173 65.3
Prupe.1G374200 Prunus persica HOM05D004555 ORTHO05D005305 4.7e-58 228.4 180 65.0
Sc02g0005680 Simmondsia chinensis HOM05D004555 ORTHO05D005305 1.1e-57 227.3 173 63.6
QL02p009638 Quercus lobata HOM05D004555 ORTHO05D005305 1.5e-56 223.4 173 63.0
COL.COLO4_26241 Corchorus olitorius HOM05D004555 ORTHO05D005305 2.6e-56 222.6 180 61.7
MSTRG.1250 Avicennia marina HOM05D004555 ORTHO05D005305 4.4e-56 221.9 173 63.0
Aqoxy5G01553 Aquilegia oxysepala HOM05D004555 ORTHO05D005305 5.8e-56 221.5 173 63.0
CANSAT25G2211 Cannabis sativa HOM05D004555 ORTHO05D005305 5.8e-56 221.5 177 62.1
SGA_v2.0_scaffold201G41359 Striga asiatica HOM05D004555 ORTHO05D005305 5.8e-56 221.5 173 62.4
Dinv39456 Davidia involucrata HOM05D004555 ORTHO05D005305 7.5e-56 221.1 173 63.6
FAN27G1022 Fragaria x ananassa HOM05D004555 ORTHO05D005305 7.5e-56 221.1 173 65.9
Atru.chr13.407 Acer truncatum HOM05D004555 ORTHO05D005305 9.8e-56 220.7 173 60.1
CiPaw.07G156800 Carya illinoinensis HOM05D004555 ORTHO05D005305 9.8e-56 220.7 173 63.6
CAN.G847.6 Capsicum annuum HOM05D004555 ORTHO05D005305 1.3e-55 220.3 180 61.1
ClCG08G014730 Citrullus lanatus HOM05D004555 ORTHO05D005305 1.3e-55 220.3 173 64.2
Haze_22549 Corylus avellana HOM05D004555 ORTHO05D005305 1.3e-55 220.3 200 57.5
QL02p009603 Quercus lobata HOM05D004555 ORTHO05D005305 1.3e-55 220.3 172 62.8
Migut.C00768 Erythranthe guttata HOM05D004555 ORTHO05D005305 2.2e-55 219.5 173 61.3
HanXRQChr09g0269571 Helianthus annuus HOM05D004555 ORTHO05D005305 2.2e-55 219.5 170 62.4
Sabra02G0025300 Salix brachista HOM05D004555 ORTHO05D005305 2.2e-55 219.5 173 62.4
FAN15G3036 Fragaria x ananassa HOM05D004555 ORTHO05D005305 2.9e-55 219.2 173 65.3
FAN26G3263 Fragaria x ananassa HOM05D004555 ORTHO05D005305 2.9e-55 219.2 173 65.3
HanXRQChr16g0501461 Helianthus annuus HOM05D004555 ORTHO05D005305 3.7e-55 218.8 172 63.4
Thecc.08G033500 Theobroma cacao HOM05D004555 ORTHO05D005305 3.7e-55 218.8 180 61.1
vmacro04301 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 4.9e-55 218.4 174 65.5
vmacro22853 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 4.9e-55 218.4 174 65.5
GSVIVG01009773001 Vitis vinifera HOM05D004555 ORTHO05D005305 4.9e-55 218.4 174 59.8
CsaV3_2G029030 Cucumis sativus L. HOM05D004555 ORTHO05D005305 6.4e-55 218.0 174 63.8
QL02p009656 Quercus lobata HOM05D004555 ORTHO05D005305 6.4e-55 218.0 173 61.8
Thecc.08G033700 Theobroma cacao HOM05D004555 ORTHO05D005305 6.4e-55 218.0 180 62.2
arahy.Tifrunner.gnm1.ann1.MX0J1Q Arachis hypogaea HOM05D004555 ORTHO05D005305 8.3e-55 217.6 180 60.6
Sed0025869 Sechium edule HOM05D004555 ORTHO05D005305 8.3e-55 217.6 173 63.0
Solyc12g089230.2 Solanum lycopersicum HOM05D000012 ORTHO05D000567 1.1e-54 217.2 180 60.6
Sopen12g031110 Solanum pennellii HOM05D004555 ORTHO05D005305 1.1e-54 217.2 180 60.6
PGSC0003DMG400015428 Solanum tuberosum HOM05D004555 ORTHO05D005305 1.1e-54 217.2 180 60.6
FvH4_2g39310 Fragaria vesca HOM05D004555 ORTHO05D005305 1.4e-54 216.9 173 64.7
Glyma.17G253500 Glycine max HOM05D004555 ORTHO05D005305 1.4e-54 216.9 174 63.2
Psat6g009720 Pisum sativum HOM05D004555 ORTHO05D005305 1.4e-54 216.9 179 60.3
Rhsim07G0242300 Rhododendron simsii HOM05D004555 ORTHO05D005305 1.4e-54 216.9 174 64.4
Rhsim07G0242900 Rhododendron simsii HOM05D004555 ORTHO05D005305 1.4e-54 216.9 174 64.4
EL10Ac1g00613 Beta vulgaris HOM05D004555 ORTHO05D005305 2.4e-54 216.1 174 59.8
Hma1.2p1_1194F.1_g265760 Hydrangea macrophylla HOM05D004555 ORTHO05D005305 2.4e-54 216.1 175 62.3
Glyma.14G071100 Glycine max HOM05D004555 ORTHO05D005305 4.1e-54 215.3 174 63.2
MD08G1024400 Malus domestica HOM05D004555 ORTHO05D005305 4.1e-54 215.3 180 61.1
Potri.005G231600 Populus trichocarpa HOM05D004555 ORTHO05D005305 4.1e-54 215.3 180 60.0
Lj5g0004312 Lotus japonicus HOM05D004555 ORTHO05D005305 9.2e-54 214.2 174 60.3
PGSC0003DMG400003702 Solanum tuberosum HOM05D004555 ORTHO05D005305 9.2e-54 214.2 173 58.4
arahy.Tifrunner.gnm1.ann1.LAIT0P Arachis hypogaea HOM05D004555 ORTHO05D005305 1.6e-53 213.4 181 60.2
Ciclev10002388m.g Citrus clementina HOM05D004555 ORTHO05D005305 1.6e-53 213.4 173 59.0
Duzib093G2146 Durio zibethinus HOM05D004555 ORTHO05D005305 1.6e-53 213.4 173 59.0
Medtr1g022950 Medicago truncatula HOM05D004555 ORTHO05D005305 1.6e-53 213.4 181 60.2
Solyc04g080750.4 Solanum lycopersicum HOM05D004555 ORTHO05D005305 1.6e-53 213.4 173 57.2
Cfa013876 Carpinus fangiana HOM05D004555 ORTHO05D005305 2.7e-53 212.6 174 61.5
VMungo0647G2091 Vigna mungo HOM05D004555 ORTHO05D005305 2.7e-53 212.6 174 63.2
TPR.G30491 Trifolium pratense HOM05D004555 ORTHO05D005305 3.5e-53 212.2 179 60.3
DCAR_022455 Daucus carota HOM05D004555 ORTHO05D005305 4.6e-53 211.8 179 57.5
Gohir.A05G190600 Gossypium hirsutum HOM05D004555 ORTHO05D005305 4.6e-53 211.8 173 59.5
Lalb_Chr22g0354561 Lupinus albus HOM05D004555 ORTHO05D005305 6.0e-53 211.5 178 60.1
CSS0029656 Camellia sinensis var. sinensis HOM05D004555 ORTHO05D005305 1.0e-52 210.7 173 61.3
RcHm_v2.0_Chr6g0301691 Rosa chinensis HOM05D004555 ORTHO05D005305 1.0e-52 210.7 170 63.5
AUR62034520 Chenopodium quinoa HOM05D004555 ORTHO05D005305 1.3e-52 210.3 173 59.0
PSO724G1102 Papaver somniferum HOM05D004555 ORTHO05D005305 1.7e-52 209.9 173 58.4
Atru.chr13.408 Acer truncatum HOM05D004555 ORTHO05D005305 2.3e-52 209.5 173 59.0
Gohir.D05G194000 Gossypium hirsutum HOM05D004555 ORTHO05D005305 2.3e-52 209.5 173 59.0
Gorai.009G199000 Gossypium raimondii HOM05D004555 ORTHO05D005305 2.3e-52 209.5 173 59.0
Peaxi162Scf00189g00812 Petunia axillaris HOM05D004555 ORTHO05D005305 2.3e-52 209.5 173 56.6
Cfa013877 Carpinus fangiana HOM05D004555 ORTHO05D005305 3.0e-52 209.1 174 60.3
Phvul.001G011500 Phaseolus vulgaris HOM05D004555 ORTHO05D005305 3.9e-52 208.8 174 62.6
Lsat_1_v5_gn_4_117401 Lactuca sativa HOM05D004555 ORTHO05D005305 6.6e-52 208.0 172 59.9
Duzib116G0274 Durio zibethinus HOM05D004555 ORTHO05D005305 1.1e-51 207.2 155 64.5
Nn1g05806 Nelumbo nucifera HOM05D004555 ORTHO05D005305 1.5e-51 206.8 172 57.6
AUR62014481 Chenopodium quinoa HOM05D004555 ORTHO05D005305 1.9e-51 206.5 173 57.8
SalBow7G0356 Salvia bowleyana HOM05D004555 ORTHO05D005305 3.3e-51 205.7 173 62.4
Lj4P789T31 Lonicera japonica HOM05D004555 ORTHO05D005305 1.2e-50 203.8 172 58.7
COL.COLO4_26242 Corchorus olitorius HOM05D004555 ORTHO05D005305 3.6e-50 202.2 143 67.8
PSO729G0189 Papaver somniferum HOM05D004555 ORTHO05D005305 4.7e-50 201.8 199 51.3
ECA232G1060 Erigeron canadensis HOM05D004555 ORTHO05D005305 8.1e-50 201.1 153 63.4
Eucgr.F01860 Eucalyptus grandis HOM05D004555 ORTHO05D005305 8.1e-50 201.1 180 56.7
MBI16_g23832_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 2.3e-49 199.5 172 58.7
Hund17186 Selenicereus undatus HOM05D004555 ORTHO05D005305 5.2e-49 198.4 173 57.2
TWI56G1140 Tripterygium wilfordii HOM05D004555 ORTHO05D005305 6.8e-49 198.0 203 52.2
Cc10_g14070 Coffea canephora HOM05D004555 ORTHO05D005305 1.5e-48 196.8 173 57.8
Nitab4.5_0000577g0020 Nicotiana tabacum HOM05D004555 ORTHO05D005305 2.6e-48 196.1 165 59.4
Hund17243 Selenicereus undatus HOM05D004555 ORTHO05D005305 3.4e-48 195.7 173 55.5
Cpa.g.sc99.8 Carica papaya HOM05D004555 ORTHO05D005305 5.8e-48 194.9 172 61.6
MELO3C010969.2 Cucumis melo HOM05D004555 ORTHO05D005305 9.9e-48 194.1 159 62.3
unitig_26.g9839 Utricularia gibba HOM05D004555 ORTHO05D005305 1.3e-47 193.7 173 56.6
TPR.G17924 Trifolium pratense HOM05D004555 ORTHO05D005305 1.4e-46 190.3 164 59.1
Peaxi162Scf00064g00530 Petunia axillaris HOM05D000012 ORTHO05D000567 7.1e-46 188.0 157 59.9
ATR1154G019 Amborella trichopoda HOM05D004555 ORTHO05D005305 1.2e-45 187.2 182 51.1
Os01g0262500 Oryza sativa ssp. japonica HOM05D004555 ORTHO05D005305 8.6e-44 181.0 168 57.1
Nitab4.5_0007928g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 4.3e-43 178.7 206 48.1
Zm00001eb333330 Zea mays HOM05D004555 ORTHO05D005305 4.3e-43 178.7 192 50.5
Oeu030598.1 Olea europaea HOM05D004555 ORTHO05D005305 9.5e-43 177.6 133 65.4
Manes.18G021200 Manihot esculenta HOM05D004555 ORTHO05D005305 3.6e-42 175.6 169 52.7
Sed0024456 Sechium edule HOM05D004555 ORTHO05D005305 5.4e-38 161.8 130 63.1
MBI16_g23833_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 7.1e-38 161.4 189 49.2
SEGI_11700 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 6.6e-36 154.8 168 47.6
Cc10_g02450 Coffea canephora HOM05D004555 ORTHO05D005305 4.0e-33 145.6 107 64.5
Sopen04g034340 Solanum pennellii HOM05D004555 ORTHO05D005305 3.4e-32 142.5 104 62.5
Nitab4.5_0001091g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 8.4e-31 137.9 173 41.0
HanXRQChr09g0269541 Helianthus annuus HOM05D004555 ORTHO05D005305 9.3e-30 134.4 108 61.1
TPR.G29885 Trifolium pratense HOM05D004555 ORTHO05D005305 1.2e-29 134.0 124 55.6
AagrBONN_evm.TU.Sc2ySwM_369.584 Anthoceros agrestis HOM05D004555 ORTHO05D005305 1.6e-29 133.7 172 44.2
Lalb_Chr14g0369521 Lupinus albus HOM05D004555 ORTHO05D005305 3.5e-29 132.5 117 53.0
FAN20G2579 Fragaria x ananassa HOM05D004555 ORTHO05D005305 2.3e-28 129.8 117 58.1
Nitab4.5_0001861g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.5e-27 127.1 115 53.0
Mapoly0020s0017 Marchantia polymorpha HOM05D004555 ORTHO05D005305 4.8e-26 122.1 170 40.6
SEGI_31948 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 1.5e-24 117.1 109 48.6
SMO259G0011 Selaginella moellendorffii HOM05D004555 ORTHO05D005305 3.4e-24 115.9 167 42.5
CBR_g32335 Chara braunii HOM05D004555 ORTHO05D005305 7.6e-24 114.8 178 38.2
Nitab4.5_0007928g0040 Nicotiana tabacum HOM05D004555 ORTHO05D005305 8.4e-23 111.3 108 49.1
Pp3c7_6700 Physcomitrium patens HOM05D004555 ORTHO05D005305 1.2e-21 107.5 157 36.9
CARHR263530 Cardamine hirsuta HOM05D004555 ORTHO05D005305 1.8e-17 93.6 69 73.9
MCO11G540 Micromonas commoda HOM05D004555 ORTHO05D005305 4.0e-17 92.4 164 34.8
Cc11_g05350 Coffea canephora HOM05D004555 ORTHO05D005305 1.9e-11 73.6 62 59.7
Haze_22557 Corylus avellana HOM05D004555 ORTHO05D005305 3.3e-11 72.8 44 72.7
Lalb_Chr14g0369531 Lupinus albus HOM05D004555 ORTHO05D005305 1.2e-08 64.3 43 65.1
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 2.0e-08 63.5 47 59.6
vmacro04300 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.9e-07 59.7 49 59.2
vmacro22852 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 2.9e-07 59.7 49 59.2
PGR031G0233 Punica granatum HOM05D004555 ORTHO05D005305 4.9e-07 58.9 53 49.1
Hund17190 Selenicereus undatus HOM05D004555 ORTHO05D005305 4.2e-06 55.8 76 40.8


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