Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G8510 Aethionema arabicum HOM05D007557 ORTHO05D009573 4.3e-37 157.5 82 100.0
AT1G34640 Arabidopsis thaliana HOM05D007557 ORTHO05D009573 3.2e-32 141.4 81 81.5
BcaC05g27757 Brassica carinata HOM05D007557 ORTHO05D009573 4.2e-32 141.0 81 82.7
Carub.0001s3264 Capsella rubella HOM05D007557 ORTHO05D009573 5.4e-32 140.6 81 81.5
C05p37510 Brassica napus HOM05D007557 ORTHO05D009573 1.6e-31 139.0 80 82.5
BolC5t32491H Brassica oleracea HOM05D007557 ORTHO05D009573 1.6e-31 139.0 80 82.5
BraA05t21266Z Brassica rapa HOM05D007557 ORTHO05D009573 1.6e-31 139.0 80 82.5
Sp1g29760 Schrenkiella parvula HOM05D007557 ORTHO05D009573 1.6e-31 139.0 81 81.5
CARHR033940 Cardamine hirsuta HOM05D007557 ORTHO05D009573 2.1e-31 138.7 81 81.5
BcaB03g13675 Brassica carinata HOM05D007557 ORTHO05D009573 6.0e-31 137.1 81 81.5
Thhalv10001839m.g Eutrema salsugineum HOM05D007557 ORTHO05D009573 1.3e-30 136.0 80 80.0
A05p23900 Brassica napus HOM05D007557 ORTHO05D009573 2.4e-27 125.2 70 82.9
THA.LOC104816752 Tarenaya hassleriana HOM05D007557 ORTHO05D009573 1.2e-26 122.9 81 70.4
Cpa.g.sc36.133 Carica papaya HOM05D007557 ORTHO05D009573 2.4e-19 98.6 81 59.3
Gohir.A05G267100 Gossypium hirsutum HOM05D007557 ORTHO05D009573 5.3e-19 97.4 81 59.3
Duzib041G0047 Durio zibethinus HOM05D007557 ORTHO05D009573 6.9e-19 97.1 81 55.6
COL.COLO4_16396 Corchorus olitorius HOM05D007557 ORTHO05D009573 2.6e-18 95.1 77 58.4
Gorai.009G281300 Gossypium raimondii HOM05D007557 ORTHO05D009573 3.4e-18 94.7 81 56.8
Duzib093G0460 Durio zibethinus HOM05D007557 ORTHO05D009573 5.8e-18 94.0 81 55.6
TWI12G0426 Tripterygium wilfordii HOM05D007557 ORTHO05D009573 7.6e-18 93.6 81 54.3
Thecc.08G106600 Theobroma cacao HOM05D007557 ORTHO05D009573 1.0e-17 93.2 77 58.4
Ciclev10003485m.g Citrus clementina HOM05D007557 ORTHO05D009573 1.3e-17 92.8 78 55.1
Duzib093G1199 Durio zibethinus HOM05D007557 ORTHO05D009573 1.7e-17 92.4 81 55.6
Atru.chr13.1185 Acer truncatum HOM05D007557 ORTHO05D009573 3.8e-17 91.3 77 54.5
Manes.02G152600 Manihot esculenta HOM05D007557 ORTHO05D009573 4.9e-17 90.9 79 51.9
Eucgr.F00324 Eucalyptus grandis HOM05D007557 ORTHO05D009573 6.5e-17 90.5 81 51.9
Duzib116G0255 Durio zibethinus HOM05D007557 ORTHO05D009573 1.4e-16 89.4 81 50.6
Gohir.D05G268700 Gossypium hirsutum HOM05D007557 ORTHO05D009573 1.4e-16 89.4 81 55.6
RcHm_v2.0_Chr7g0238961 Rosa chinensis HOM05D007557 ORTHO05D009573 1.4e-16 89.4 79 53.2
Cfa013637 Carpinus fangiana HOM05D007557 ORTHO05D009573 1.9e-16 89.0 81 51.9
CiPaw.07G179800 Carya illinoinensis HOM05D007557 ORTHO05D009573 9.3e-16 86.7 81 53.1
Lalb_Chr23g0270571 Lupinus albus HOM05D007557 ORTHO05D009573 1.2e-15 86.3 82 50.0
PGR042G1134 Punica granatum HOM05D007557 ORTHO05D009573 2.1e-15 85.5 82 53.7
Lj1g0024074 Lotus japonicus HOM05D007557 ORTHO05D009573 2.7e-15 85.1 81 48.1
MD08G1183000 Malus domestica HOM05D007557 ORTHO05D009573 6.0e-15 84.0 77 49.4
MD15G1369400 Malus domestica HOM05D007557 ORTHO05D009573 6.0e-15 84.0 77 50.6
FAN08G0381 Fragaria x ananassa HOM05D007557 ORTHO05D009573 7.9e-15 83.6 72 54.2
Glyma.06G103500 Glycine max HOM05D007557 ORTHO05D009573 1.0e-14 83.2 70 54.3
Prupe.1G519000 Prunus persica HOM05D007557 ORTHO05D009573 1.8e-14 82.4 81 46.9
FvH4_5g37320 Fragaria vesca HOM05D007557 ORTHO05D009573 2.3e-14 82.0 72 52.8
FAN18G1226 Fragaria x ananassa HOM05D007557 ORTHO05D009573 2.3e-14 82.0 72 52.8
Glyma.04G102200 Glycine max HOM05D007557 ORTHO05D009573 3.9e-14 81.3 70 52.9
TPR.G34528 Trifolium pratense HOM05D007557 ORTHO05D009573 3.9e-14 81.3 72 48.6
FAN04G0616 Fragaria x ananassa HOM05D007557 ORTHO05D009573 5.1e-14 80.9 72 52.8
MELO3C003576.2 Cucumis melo HOM05D007557 ORTHO05D009573 6.7e-14 80.5 69 56.5
Prupe.1G517300 Prunus persica HOM05D007557 ORTHO05D009573 6.7e-14 80.5 81 46.9
Medtr3g074500 Medicago truncatula HOM05D007557 ORTHO05D009573 1.1e-13 79.7 72 50.0
Potri.002G096700 Populus trichocarpa HOM05D007557 ORTHO05D009573 1.1e-13 79.7 75 49.3
Sc26g0000100 Simmondsia chinensis HOM05D007557 ORTHO05D009573 1.1e-13 79.7 81 45.7
VMungo1309G0845 Vigna mungo HOM05D007557 ORTHO05D009573 1.1e-13 79.7 70 52.9
Phvul.009G031100 Phaseolus vulgaris HOM05D007557 ORTHO05D009573 1.5e-13 79.3 70 50.0
Hund26963 Selenicereus undatus HOM05D007557 ORTHO05D009573 2.5e-13 78.6 68 52.9
arahy.Tifrunner.gnm1.ann1.JHL0SX Arachis hypogaea HOM05D007557 ORTHO05D009573 3.3e-13 78.2 71 49.3
arahy.Tifrunner.gnm1.ann1.VD5D9J Arachis hypogaea HOM05D007557 ORTHO05D009573 3.3e-13 78.2 71 49.3
Dinv44776 Davidia involucrata HOM05D007557 ORTHO05D009573 4.3e-13 77.8 81 45.7
EL10Ac1g01212 Beta vulgaris HOM05D007557 ORTHO05D009573 5.7e-13 77.4 68 51.5
CDE06G2682 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 5.7e-13 77.4 81 46.9
CsaV3_3G047480 Cucumis sativus L. HOM05D007557 ORTHO05D009573 5.7e-13 77.4 69 55.1
CANSAT25G0704 Cannabis sativa HOM05D007557 ORTHO05D009573 7.4e-13 77.0 82 48.8
ClCG11G014080 Citrullus lanatus HOM05D007557 ORTHO05D009573 7.4e-13 77.0 82 51.2
Hund16904 Selenicereus undatus HOM05D007557 ORTHO05D009573 7.4e-13 77.0 66 51.5
CDE03G0188 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 1.3e-12 76.3 81 46.9
QL12p036790 Quercus lobata HOM05D007557 ORTHO05D009573 1.6e-12 75.9 82 46.3
TAR625G0198 Trochodendron aralioides HOM05D007557 ORTHO05D009573 1.6e-12 75.9 81 43.2
Zm00001eb109640 Zea mays HOM05D007557 ORTHO05D009573 2.1e-12 75.5 72 48.6
Actinidia30774 Actinidia chinensis HOM05D007557 ORTHO05D009573 2.8e-12 75.1 67 50.7
Psat5g138560 Pisum sativum HOM05D007557 ORTHO05D009573 2.8e-12 75.1 82 43.9
Psat5g138640 Pisum sativum HOM05D007557 ORTHO05D009573 2.8e-12 75.1 82 43.9
Cc10_g07180 Coffea canephora HOM05D007557 ORTHO05D009573 4.8e-12 74.3 80 41.2
Sed0005506 Sechium edule HOM05D007557 ORTHO05D009573 6.2e-12 73.9 82 47.6
Zm00001eb327820 Zea mays HOM05D007557 ORTHO05D009573 6.2e-12 73.9 72 47.2
PSO447G0314 Papaver somniferum HOM05D007557 ORTHO05D009573 1.4e-11 72.8 67 49.3
Migut.N02896 Erythranthe guttata HOM05D007557 ORTHO05D009573 1.8e-11 72.4 60 55.0
HPP92_005842 Vanilla planifolia HOM05D007557 ORTHO05D009573 2.4e-11 72.0 72 50.0
Aqoxy6G00779 Aquilegia oxysepala HOM05D007557 ORTHO05D009573 3.1e-11 71.6 67 46.3
Os07g0622900 Oryza sativa ssp. japonica HOM05D007557 ORTHO05D009573 3.1e-11 71.6 72 44.4
PSO210G0208 Papaver somniferum HOM05D007557 ORTHO05D009573 4.0e-11 71.2 67 47.8
AUR62027760 Chenopodium quinoa HOM05D007557 ORTHO05D009573 6.9e-11 70.5 81 42.0
Nn1g05358 Nelumbo nucifera HOM05D007557 ORTHO05D009573 6.9e-11 70.5 80 41.2
DCAR_012735 Daucus carota HOM05D007557 ORTHO05D009573 2.6e-10 68.6 65 46.2
Lj4A102T59 Lonicera japonica HOM05D007557 ORTHO05D009573 3.4e-10 68.2 68 50.0
HanXRQChr05g0162891 Helianthus annuus HOM05D007557 ORTHO05D009573 4.5e-10 67.8 65 46.2
Nitab4.5_0000232g0140 Nicotiana tabacum HOM05D007557 ORTHO05D009573 5.8e-10 67.4 68 45.6
Lsat_1_v5_gn_6_103041 Lactuca sativa HOM05D007557 ORTHO05D009573 7.6e-10 67.0 65 43.1
Ah.05g169950 Amaranthus hybridus HOM05D007557 ORTHO05D009573 2.2e-09 65.5 81 38.3
Rhsim06G0081800 Rhododendron simsii HOM05D007557 ORTHO05D009573 2.9e-09 65.1 66 43.9
vmacro21268 Vaccinium macrocarpon HOM05D007557 ORTHO05D009573 5.0e-09 64.3 79 38.0
MBI05_g37049_MAGBIO Magnolia biondii HOM05D007557 ORTHO05D009573 1.1e-08 63.2 75 40.0
Haze_22270 Corylus avellana HOM05D007557 ORTHO05D009573 1.9e-08 62.4 59 49.2
Nitab4.5_0003631g0020 Nicotiana tabacum HOM05D007557 ORTHO05D009573 7.1e-08 60.5 66 40.9
PGSC0003DMG400008555 Solanum tuberosum HOM05D007557 ORTHO05D009573 7.1e-08 60.5 58 48.3
CAN.G222.163 Capsicum annuum HOM05D007557 ORTHO05D009573 4.6e-07 57.8 65 43.1
Solyc12g057030.2 Solanum lycopersicum HOM05D007557 ORTHO05D009573 7.9e-07 57.0 72 40.3


User provided reference genes

Program Settings