Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 6.1e-161 570.9 308 100.0
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 3.0e-99 365.9 283 71.0
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 2.8e-97 359.4 283 71.0
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 2.4e-96 356.3 283 71.0
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 1.3e-94 350.5 283 70.3
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 4.9e-94 348.6 283 69.6
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 1.3e-91 340.5 283 68.9
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 8.2e-89 331.3 298 65.4
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 1.4e-88 330.5 310 63.5
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 1.8e-88 330.1 308 63.6
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 2.9e-78 296.2 284 58.8
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 1.4e-77 293.9 334 56.3
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 1.8e-64 250.4 171 78.9
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 3.9e-59 232.6 310 47.1
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 7.4e-58 228.4 311 45.0
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 6.3e-57 225.3 308 46.8
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 6.3e-57 225.3 311 44.1
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 1.1e-56 224.6 295 47.8
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.1e-56 224.6 324 43.2
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 2.4e-56 223.4 311 43.7
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 1.6e-55 220.7 261 49.4
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 2.0e-55 220.3 310 46.1
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.3e-54 217.6 319 43.6
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 2.2e-54 216.9 315 44.8
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 5.0e-54 215.7 311 44.4
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 3.2e-53 213.0 311 43.7
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 1.2e-52 211.1 310 44.2
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 8.0e-52 208.4 303 43.2
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 1.0e-51 208.0 292 45.9
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 3.0e-51 206.5 303 40.6
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 6.7e-51 205.3 324 42.0
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 9.7e-50 201.4 293 43.0
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 1.7e-49 200.7 312 42.0
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 2.2e-49 200.3 244 47.5
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 2.8e-49 199.9 295 43.7
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.8e-48 197.2 313 39.6
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 2.0e-47 193.7 307 41.4
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 4.5e-47 192.6 310 41.3
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 1.3e-46 191.0 311 40.8
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 1.7e-46 190.7 301 42.2
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 3.8e-46 189.5 315 38.7
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 5.0e-46 189.1 311 40.2
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 6.5e-46 188.7 315 39.4
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 1.9e-45 187.2 311 40.5
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 3.2e-45 186.4 296 41.9
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 1.2e-44 184.5 311 39.9
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 1.2e-44 184.5 300 41.0
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 1.0e-43 181.4 310 38.4
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 1.4e-43 181.0 253 43.9
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.8e-43 180.6 362 35.1
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 5.2e-43 179.1 255 43.5
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 6.8e-43 178.7 260 43.5
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 8.8e-43 178.3 294 40.1
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 8.8e-43 178.3 317 38.2
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 1.5e-42 177.6 312 39.4
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 2.0e-42 177.2 309 39.5
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 7.5e-42 175.3 311 38.9
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 7.5e-42 175.3 290 40.3
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 7.5e-42 175.3 342 38.0
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 2.8e-41 173.3 295 41.0
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.4e-40 171.0 296 39.9
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 1.2e-39 167.9 306 37.3
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 7.7e-39 165.2 296 39.9
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.0e-38 164.9 315 38.1
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.0e-38 164.9 315 38.1
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 5.0e-38 162.5 314 36.6
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 6.6e-38 162.2 108 80.6
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 6.8e-35 152.1 176 51.1
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 8.9e-35 151.8 381 33.3
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 4.4e-34 149.4 294 35.0
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 1.4e-32 144.4 299 39.5
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.8e-32 144.1 231 42.4
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 3.1e-32 143.3 303 35.6
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 9.2e-32 141.7 249 40.6
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 7.8e-31 138.7 320 33.4
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 2.3e-30 137.1 291 33.3
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 2.9e-30 136.7 283 35.3
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 8.6e-30 135.2 258 34.5
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 1.9e-29 134.0 230 39.6
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 1.2e-28 131.3 234 39.7
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 1.6e-28 131.0 283 32.2
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 8.0e-28 128.6 310 32.6
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 1.8e-27 127.5 258 34.9
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 4.0e-27 126.3 224 37.9
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.2e-26 124.8 241 38.6
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 2.0e-26 124.0 170 44.7
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 2.6e-26 123.6 114 56.1
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 2.2e-25 120.6 373 30.0
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 6.4e-25 119.0 174 46.6
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 5.4e-24 115.9 160 44.4
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 2.0e-23 114.0 162 45.1
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 1.1e-21 108.2 162 42.0
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 1.9e-21 107.5 160 41.2
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 3.3e-21 106.7 284 32.0
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 4.3e-21 106.3 299 29.4
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 4.7e-20 102.8 231 33.3
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 2.3e-19 100.5 102 49.0
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 1.2e-18 98.2 108 44.4
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 4.4e-18 96.3 193 34.2
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 7.5e-18 95.5 115 47.0
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 1.7e-17 94.4 106 49.1
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 2.9e-17 93.6 152 42.8
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 6.4e-17 92.4 282 29.1
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 5.4e-16 89.4 119 42.0
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 6.0e-15 85.9 97 45.4
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 1.3e-14 84.7 117 42.7
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 3.9e-14 83.2 284 27.5
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 3.3e-13 80.1 162 35.2
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 2.8e-12 77.0 82 50.0
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 4.7e-12 76.3 95 46.3
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 8.1e-12 75.5 80 47.5
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 6.8e-11 72.4 68 54.4
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 8.3e-09 65.5 51 60.8
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 8.6e-06 55.5 63 47.6


User provided reference genes

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