Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G7520 Aethionema arabicum HOM05D008703 ORTHO05D006961 2.3e-38 161.8 83 100.0
AL1G47210 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 6.7e-22 107.1 84 71.4
AT1G32928 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 1.3e-20 102.8 86 68.6
Thhalv10009742m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 3.1e-19 98.2 87 65.5
Sp1g28080 Schrenkiella parvula HOM05D008703 ORTHO05D006961 7.0e-19 97.1 83 66.3
Carub.0001s3124 Capsella rubella HOM05D008703 ORTHO05D006961 1.6e-18 95.9 85 65.9
A09p33470 Brassica napus HOM05D008703 ORTHO05D006961 1.1e-16 89.7 83 65.1
BraA09t38889Z Brassica rapa HOM05D008703 ORTHO05D006961 1.1e-16 89.7 83 65.1
CARHR032250 Cardamine hirsuta HOM05D008703 ORTHO05D006961 1.9e-16 89.0 85 62.4
A05p24420 Brassica napus HOM05D008703 ORTHO05D006961 7.5e-13 77.0 84 56.0
BolC5t32543H Brassica oleracea HOM05D008703 ORTHO05D006961 7.5e-13 77.0 84 56.0
BraA05t21333Z Brassica rapa HOM05D008703 ORTHO05D006961 7.5e-13 77.0 84 56.0
BcaC05g27316 Brassica carinata HOM05D008703 ORTHO05D006961 2.2e-12 75.5 88 55.7
BolC5t31969H Brassica oleracea HOM05D008703 ORTHO05D006961 2.2e-12 75.5 88 55.7
BcaC05g27814 Brassica carinata HOM05D008703 ORTHO05D006961 3.7e-12 74.7 84 54.8
C05p38160 Brassica napus HOM05D008703 ORTHO05D006961 3.7e-12 74.7 84 54.8
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 1.1e-11 73.2 83 51.8
Aa31LG6G7510 Aethionema arabicum HOM05D008703 ORTHO05D006961 1.4e-11 72.8 86 52.3
CARHR032240 Cardamine hirsuta HOM05D008703 ORTHO05D006961 1.4e-11 72.8 83 51.8
Thhalv10009230m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 1.8e-11 72.4 88 55.7
AL1G47200 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 2.7e-10 68.6 83 48.2
AT1G32920 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 2.7e-10 68.6 83 49.4
Thecc.03G217500 Theobroma cacao HOM05D008613 ORTHO05D006961 3.5e-10 68.2 82 41.5
A09p33480 Brassica napus HOM05D008703 ORTHO05D006961 4.5e-10 67.8 85 48.2
BraA09t38890Z Brassica rapa HOM05D008703 ORTHO05D006961 4.5e-10 67.8 85 48.2
Gohir.A02G099100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 5.9e-10 67.4 86 44.2
Gorai.003G077900 Gossypium raimondii HOM05D008613 ORTHO05D006961 5.9e-10 67.4 86 44.2
BcaC05g27315 Brassica carinata HOM05D008703 ORTHO05D006961 7.7e-10 67.0 85 48.2
C05p32370 Brassica napus HOM05D008703 ORTHO05D006961 7.7e-10 67.0 83 45.8
BolC5t31968H Brassica oleracea HOM05D008703 ORTHO05D006961 7.7e-10 67.0 83 45.8
Gohir.D03G084800 Gossypium hirsutum HOM05D008613 ORTHO05D006961 7.7e-10 67.0 86 44.2
BcaC07g37617 Brassica carinata HOM05D008703 ORTHO05D006961 1.0e-09 66.6 85 50.6
BolC8t47976H Brassica oleracea HOM05D008703 ORTHO05D006961 1.0e-09 66.6 85 50.6
BcaB04g17983 Brassica carinata HOM05D008703 ORTHO05D006961 1.3e-09 66.2 84 48.8
A08p09220 Brassica napus HOM05D008703 ORTHO05D006961 1.3e-09 66.2 85 50.6
BraA08t32922Z Brassica rapa HOM05D008703 ORTHO05D006961 1.3e-09 66.2 85 50.6
Thhalv10009241m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 6.5e-09 63.9 83 48.2
Prupe.5G133100 Prunus persica HOM05D008613 ORTHO05D006961 6.5e-09 63.9 88 38.6
BcaC07g37618 Brassica carinata HOM05D008703 ORTHO05D006961 8.5e-09 63.5 85 49.4
Sabra16G0303500 Salix brachista HOM05D008613 ORTHO05D006961 8.5e-09 63.5 88 42.0
Oeu023687.1 Olea europaea HOM05D008613 ORTHO05D006961 1.5e-08 62.8 89 40.4
Duzib205G1760 Durio zibethinus HOM05D008613 ORTHO05D006961 1.9e-08 62.4 82 42.7
Sabra16G0303900 Salix brachista HOM05D008613 ORTHO05D006961 1.9e-08 62.4 91 42.9
Manes.01G055100 Manihot esculenta HOM05D008613 ORTHO05D006961 5.5e-08 60.8 80 42.5
Manes.01G055000 Manihot esculenta HOM05D008613 ORTHO05D006961 7.2e-08 60.5 80 42.5
Aa31LG9G11460 Aethionema arabicum HOM05D008703 ORTHO05D006961 9.4e-08 60.1 84 46.4
AL6G44550 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 9.4e-08 60.1 83 50.6
ClCG01G001400 Citrullus lanatus HOM05D018156 ORTHO05D006961 9.4e-08 60.1 83 47.0
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 9.4e-08 60.1 88 40.9
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 9.4e-08 60.1 88 40.9
Sp6g06920 Schrenkiella parvula HOM05D008703 ORTHO05D006961 9.4e-08 60.1 80 46.2
CiPaw.11G110000 Carya illinoinensis HOM05D008613 ORTHO05D006961 1.2e-07 59.7 85 40.0
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.2e-07 59.7 89 43.8
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.2e-07 59.7 89 43.8
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 1.2e-07 59.7 87 42.5
Sabra16G0303700 Salix brachista HOM05D008613 ORTHO05D006961 1.6e-07 59.3 88 39.8
Aa31LG9G11510 Aethionema arabicum HOM05D008703 ORTHO05D006961 2.1e-07 58.9 84 45.2
Carub.0001s3123 Capsella rubella HOM05D008703 ORTHO05D006961 2.7e-07 58.5 92 42.4
CARHR256120 Cardamine hirsuta HOM05D008703 ORTHO05D006961 2.7e-07 58.5 82 47.6
Thhalv10029203m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 2.7e-07 58.5 83 44.6
vmacro11487 Vaccinium macrocarpon HOM05D008613 ORTHO05D006961 2.7e-07 58.5 96 36.5
QL02p027286 Quercus lobata HOM05D008613 ORTHO05D006961 3.6e-07 58.2 95 35.8
Sed0012511 Sechium edule HOM05D018156 ORTHO05D006961 3.6e-07 58.2 86 46.5
FvH4_5g10560 Fragaria vesca HOM05D008613 ORTHO05D006961 4.7e-07 57.8 85 43.5
FAN04G2016 Fragaria x ananassa HOM05D008613 ORTHO05D006961 4.7e-07 57.8 85 43.5
FAN08G0050 Fragaria x ananassa HOM05D008613 ORTHO05D006961 4.7e-07 57.8 85 43.5
FAN18G1327 Fragaria x ananassa HOM05D008613 ORTHO05D006961 4.7e-07 57.8 85 43.5
Gohir.A08G109100 Gossypium hirsutum HOM05D008613 ORTHO05D006961 6.1e-07 57.4 83 41.0
Gohir.D08G121900 Gossypium hirsutum HOM05D008613 ORTHO05D006961 6.1e-07 57.4 83 41.0
Sp6g06940 Schrenkiella parvula HOM05D008703 ORTHO05D006961 8.0e-07 57.0 78 44.9
Sed0004803 Sechium edule HOM05D018156 ORTHO05D006961 1.0e-06 56.6 85 44.7
Sed0021198 Sechium edule HOM05D018156 ORTHO05D006961 1.4e-06 56.2 83 43.4
CSS0022315 Camellia sinensis var. sinensis HOM05D008613 ORTHO05D006961 1.8e-06 55.8 87 39.1
Cpa.g.sc37.99 Carica papaya HOM05D008613 ORTHO05D006961 1.8e-06 55.8 88 42.0
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 1.8e-06 55.8 88 40.9
Gorai.004G128500 Gossypium raimondii HOM05D008613 ORTHO05D006961 2.3e-06 55.5 83 39.8
Sopen03g022050 Solanum pennellii HOM05D008837 ORTHO05D006961 2.3e-06 55.5 87 40.2
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 3.0e-06 55.1 86 39.5
Atru.chr9.1866 Acer truncatum HOM05D008613 ORTHO05D006961 4.0e-06 54.7 82 41.5
TWI15G0337 Tripterygium wilfordii HOM05D008613 ORTHO05D006961 8.8e-06 53.5 83 43.4


User provided reference genes

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