Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G7350 Aethionema arabicum HOM05D003976 ORTHO05D004711 6.6e-105 384.0 193 100.0
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 5.4e-14 82.0 62 74.2
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
BraA05t22669Z Brassica rapa HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 1.6e-13 80.5 53 79.2
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 3.5e-13 79.3 53 77.4
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 3.5e-13 79.3 53 77.4
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 4.6e-13 79.0 85 52.9
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 7.8e-13 78.2 53 75.5
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 7.8e-13 78.2 68 61.8
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 7.8e-13 78.2 87 49.4
Cpa.g.sc53.132 Carica papaya HOM05D003976 ORTHO05D004711 1.0e-12 77.8 66 63.6
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 1.3e-12 77.4 79 55.7
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 1.7e-12 77.0 68 60.3
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 2.3e-12 76.6 68 58.8
CiPaw.02G172200 Carya illinoinensis HOM05D003976 ORTHO05D004711 2.3e-12 76.6 69 62.3
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 2.3e-12 76.6 69 62.3
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 2.3e-12 76.6 68 63.2
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 2.3e-12 76.6 68 63.2
QL08p054329 Quercus lobata HOM05D003976 ORTHO05D004711 3.9e-12 75.9 68 60.3
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 5.1e-12 75.5 53 69.8
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 5.1e-12 75.5 68 60.3
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 5.1e-12 75.5 68 60.3
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 6.6e-12 75.1 68 61.8
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 6.6e-12 75.1 68 57.4
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 6.6e-12 75.1 78 55.1
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 6.6e-12 75.1 78 55.1
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 6.6e-12 75.1 68 58.8
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 6.6e-12 75.1 68 58.8
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 6.6e-12 75.1 68 58.8
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 6.6e-12 75.1 68 60.3
vmacro00383 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 6.6e-12 75.1 53 69.8
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 6.6e-12 75.1 66 62.1
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 8.6e-12 74.7 68 60.3
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 8.6e-12 74.7 54 66.7
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 8.6e-12 74.7 68 57.4
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 8.6e-12 74.7 53 67.9
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 8.6e-12 74.7 68 58.8
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.6e-12 74.7 68 58.8
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.6e-12 74.7 68 58.8
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.6e-12 74.7 68 58.8
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.6e-12 74.7 68 58.8
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.6e-12 74.7 68 58.8
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 8.6e-12 74.7 68 58.8
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 1.1e-11 74.3 53 67.9
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 1.1e-11 74.3 53 67.9
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.1e-11 74.3 69 53.6
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 1.1e-11 74.3 53 67.9
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 1.1e-11 74.3 68 58.8
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 1.1e-11 74.3 53 67.9
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 1.1e-11 74.3 53 67.9
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 1.1e-11 74.3 53 66.0
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 1.5e-11 73.9 68 58.8
COL.COLO4_34214 Corchorus olitorius HOM05D003976 ORTHO05D004711 1.5e-11 73.9 68 60.3
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 1.5e-11 73.9 53 69.8
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.5e-11 73.9 53 66.0
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.5e-11 73.9 53 69.8
Gohir.A10G202400 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.5e-11 73.9 53 69.8
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.5e-11 73.9 53 69.8
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 1.5e-11 73.9 53 69.8
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 1.5e-11 73.9 53 66.0
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 1.5e-11 73.9 68 60.3
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 1.5e-11 73.9 53 66.0
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 1.9e-11 73.6 53 66.0
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 2.5e-11 73.2 53 69.8
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 2.5e-11 73.2 53 67.9
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 2.5e-11 73.2 53 66.0
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 2.5e-11 73.2 53 64.2
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 2.5e-11 73.2 53 64.2
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 2.5e-11 73.2 53 66.0
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 2.5e-11 73.2 68 57.4
Hund17145 Selenicereus undatus HOM05D003976 ORTHO05D004711 2.5e-11 73.2 66 57.6
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 2.5e-11 73.2 53 67.9
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 2.5e-11 73.2 53 67.9
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 2.5e-11 73.2 53 66.0
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 3.3e-11 72.8 53 64.2
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 3.3e-11 72.8 53 66.0
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 3.3e-11 72.8 53 67.9
Peaxi162Scf00145g01215 Petunia axillaris HOM05D003976 ORTHO05D004711 3.3e-11 72.8 53 67.9
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 3.3e-11 72.8 66 57.6
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 3.3e-11 72.8 66 57.6
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 4.3e-11 72.4 53 66.0
Rhsim03G0115800 Rhododendron simsii HOM05D003976 ORTHO05D004711 4.3e-11 72.4 53 67.9
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 4.3e-11 72.4 53 69.8
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 5.6e-11 72.0 75 56.0
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 5.6e-11 72.0 53 66.0
TPR.G33031 Trifolium pratense HOM05D003976 ORTHO05D004711 5.6e-11 72.0 71 53.5
Cc02_g10920 Coffea canephora HOM05D003976 ORTHO05D004711 7.3e-11 71.6 53 67.9
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 7.3e-11 71.6 53 66.0
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 1.2e-10 70.9 53 64.2
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 1.6e-10 70.5 53 66.0
Lalb_Chr21g0313551 Lupinus albus HOM05D003976 ORTHO05D004711 1.6e-10 70.5 54 61.1
Lalb_Chr21g0313681 Lupinus albus HOM05D003976 ORTHO05D004711 1.6e-10 70.5 54 61.1
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 2.1e-10 70.1 103 42.7
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 2.1e-10 70.1 103 42.7
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 2.8e-10 69.7 61 60.7
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 3.6e-10 69.3 77 46.8
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 4.7e-10 68.9 72 48.6
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 4.7e-10 68.9 53 62.3
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 8.1e-10 68.2 53 64.2
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 1.1e-09 67.8 66 53.0
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 1.8e-09 67.0 53 60.4
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 6.8e-09 65.1 53 62.3
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 7.6e-08 61.6 48 68.8
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 9.9e-08 61.2 68 48.5
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 3.7e-07 59.3 68 45.6
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 4.9e-07 58.9 68 44.1


User provided reference genes

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