Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 9.8e-141 503.4 251 100.0
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 1.2e-103 380.2 256 77.0
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 2.1e-103 379.4 262 77.1
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 6.8e-102 374.4 262 76.3
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 1.2e-101 373.6 253 76.7
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 3.4e-101 372.1 256 76.6
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 8.4e-100 367.5 254 75.2
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 1.9e-99 366.3 251 75.7
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 3.5e-98 362.1 251 74.9
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 8.7e-97 357.5 253 72.7
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 1.6e-95 353.2 252 71.8
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 4.8e-95 351.7 253 72.3
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 4.8e-95 351.7 253 72.3
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 1.5e-93 346.7 253 71.9
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 2.1e-90 336.3 251 70.5
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 8.7e-89 330.9 251 70.1
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 5.8e-77 291.6 204 73.0
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 8.4e-76 287.7 243 61.3
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 8.4e-76 287.7 240 62.9
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 1.6e-74 283.5 243 57.6
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 1.6e-74 283.5 243 57.6
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 1.6e-74 283.5 240 61.7
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 2.3e-73 279.6 244 59.8
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 3.9e-73 278.9 239 59.8
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 2.5e-72 276.2 241 60.6
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 3.3e-72 275.8 244 59.4
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 7.4e-72 274.6 245 58.4
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 7.4e-72 274.6 242 60.3
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 7.4e-72 274.6 249 57.8
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 4.8e-71 271.9 247 56.3
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 1.8e-70 270.0 248 56.9
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.3e-70 268.5 247 55.9
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 2.6e-69 266.2 237 58.6
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.7e-68 263.5 246 54.9
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 3.8e-68 262.3 253 55.3
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.0e-68 261.9 246 54.9
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 8.4e-68 261.2 246 54.9
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 2.5e-67 259.6 252 55.6
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 1.6e-66 256.9 186 70.4
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 2.1e-66 256.5 246 56.5
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 2.1e-66 256.5 248 56.9
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 3.5e-66 255.8 246 56.5
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 3.5e-66 255.8 243 54.3
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 7.9e-66 254.6 240 54.6
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 1.3e-65 253.8 247 56.7
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 3.9e-65 252.3 243 56.8
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 1.1e-64 250.8 241 55.6
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 1.1e-64 250.8 245 55.9
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 2.5e-64 249.6 253 53.8
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 2.5e-64 249.6 249 54.2
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 4.3e-64 248.8 246 53.3
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 4.3e-64 248.8 233 54.1
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 4.3e-64 248.8 243 56.0
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 7.4e-64 248.1 251 55.8
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 7.4e-64 248.1 229 55.0
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 6.3e-63 245.0 236 54.2
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 8.2e-63 244.6 186 67.2
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 1.4e-62 243.8 235 57.0
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 1.8e-62 243.4 243 51.4
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 1.2e-61 240.7 243 53.9
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 1.2e-61 240.7 245 54.7
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 2.0e-61 240.0 249 54.6
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 2.6e-61 239.6 241 52.3
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 3.4e-61 239.2 243 54.3
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 4.5e-61 238.8 231 54.1
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 5.9e-61 238.4 244 53.7
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 5.9e-61 238.4 243 52.7
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 7.7e-61 238.0 243 54.3
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 7.7e-61 238.0 243 53.1
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 1.4e-59 233.8 241 53.5
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 7.2e-59 231.5 185 62.7
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 2.1e-58 229.9 230 53.9
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 2.7e-58 229.6 243 50.6
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 3.6e-58 229.2 245 53.1
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 1.0e-57 227.6 240 53.8
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 1.4e-57 227.3 225 55.1
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 5.1e-57 225.3 264 44.7
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 6.7e-57 224.9 231 51.9
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 8.8e-57 224.6 232 50.9
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 5.7e-56 221.9 264 44.7
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 9.7e-56 221.1 214 53.3
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 4.8e-55 218.8 186 60.2
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 1.8e-54 216.9 233 54.5
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 2.2e-52 209.9 233 47.6
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 2.9e-52 209.5 256 49.2
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 2.9e-52 209.5 239 47.7
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 3.8e-52 209.1 251 48.2
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 6.5e-52 208.4 244 47.1
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 2.7e-50 203.0 242 48.8
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 3.0e-49 199.5 240 46.2
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 3.9e-49 199.1 135 70.4
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 2.0e-48 196.8 218 48.2
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 2.0e-48 196.8 196 50.5
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 1.4e-46 190.7 178 62.9
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 1.4e-46 190.7 178 62.9
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 3.1e-46 189.5 178 62.4
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 1.8e-41 173.7 222 43.7
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 1.5e-40 170.6 232 44.0
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 2.6e-40 169.9 240 43.8
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 5.9e-37 158.7 226 38.5
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 9.4e-35 151.4 189 46.0
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 3.6e-34 149.4 241 41.1
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 8.5e-28 128.3 137 49.6
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 2.3e-25 120.2 134 46.3
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 1.5e-24 117.5 247 35.6
Psat3g111760 Pisum sativum HOM05D006578 ORTHO05D008100 1.1e-22 111.3 135 46.7
VMungo1383G2377 Vigna mungo HOM05D006578 ORTHO05D008100 1.4e-22 110.9 143 46.9
Glyma.09G263100 Glycine max HOM05D006578 ORTHO05D008100 2.4e-22 110.2 139 47.5
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 5.9e-21 105.5 124 45.2
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 7.7e-21 105.1 136 45.6
arahy.Tifrunner.gnm1.ann1.6WXN94 Arachis hypogaea HOM05D006578 ORTHO05D008100 1.3e-20 104.4 127 48.0
Phvul.008G068900 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 5.0e-20 102.4 139 45.3
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 1.1e-19 101.3 192 33.9
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 1.1e-19 101.3 192 33.9
Lj1g0003243 Lotus japonicus HOM05D006578 ORTHO05D008100 1.2e-18 97.8 142 43.7
arahy.Tifrunner.gnm1.ann1.UYM9MT Arachis hypogaea HOM05D006578 ORTHO05D008100 2.1e-18 97.1 128 46.9
Glyma.18G229100 Glycine max HOM05D006578 ORTHO05D008100 3.6e-18 96.3 147 41.5
Nn4g25270 Nelumbo nucifera HOM05D006578 ORTHO05D008100 4.7e-18 95.9 122 47.5
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 2.0e-16 90.5 148 39.2
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 9.8e-16 88.2 140 42.1
Sabra15G0075700 Salix brachista HOM05D000345 ORTHO05D000215 2.2e-15 87.0 104 47.1
Sc07g0010050 Simmondsia chinensis HOM05D006578 ORTHO05D008100 6.4e-15 85.5 129 38.8
Aa31LG9G9020 Aethionema arabicum HOM05D006578 ORTHO05D008100 2.1e-10 70.5 41 90.2
Glyma.03G015000 Glycine max HOM05D006578 ORTHO05D008100 6.2e-10 68.9 129 35.7
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 3.1e-09 66.6 64 51.6


User provided reference genes

Program Settings