Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 1.6e-189 666.8 607 100.0
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 1.2e-131 474.6 614 78.0
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 2.1e-128 463.8 609 77.3
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 2.2e-122 443.7 608 62.8
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 2.2e-122 443.7 608 62.8
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 2.2e-122 443.7 608 63.2
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 3.2e-121 439.9 610 61.5
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 3.2e-121 439.9 610 61.5
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 2.8e-117 426.8 608 65.6
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 1.2e-115 421.4 605 71.9
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 7.2e-113 412.1 603 71.5
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 8.8e-111 405.2 604 70.2
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 2.2e-101 374.0 604 63.6
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 1.0e-90 338.6 550 66.0
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 5.5e-73 279.6 594 55.9
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 4.7e-72 276.6 594 49.5
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 1.0e-71 275.4 592 55.4
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 2.9e-69 267.3 604 44.5
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 3.2e-68 263.8 596 47.7
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 9.2e-68 262.3 590 49.2
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 1.0e-66 258.8 585 48.2
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 3.9e-66 256.9 613 36.5
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 2.5e-65 254.2 590 48.5
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 9.5e-65 252.3 583 51.1
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.0e-63 248.8 596 49.8
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 2.3e-63 247.7 591 46.4
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 1.5e-62 245.0 576 38.7
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 1.5e-62 245.0 603 48.8
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 2.0e-62 244.6 591 45.7
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 7.5e-62 242.7 589 52.6
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 7.5e-62 242.7 629 45.0
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 9.8e-62 242.3 590 52.7
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 6.4e-61 239.6 604 48.2
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 6.4e-61 239.6 619 38.3
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 2.4e-60 237.7 588 47.8
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 4.1e-60 236.9 586 44.0
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 9.2e-60 235.7 598 35.8
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 1.2e-59 235.3 596 56.4
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 1.2e-59 235.3 581 48.7
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 2.0e-59 234.6 604 51.5
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 4.6e-59 233.4 603 53.2
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 1.3e-58 231.9 587 46.7
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 2.3e-58 231.1 594 51.9
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 2.3e-58 231.1 606 53.5
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 3.9e-58 230.3 594 46.3
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 5.0e-58 229.9 590 43.6
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 1.1e-57 228.8 592 55.7
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 5.6e-57 226.5 604 50.7
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 9.5e-57 225.7 603 36.0
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 1.2e-56 225.3 586 47.6
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.6e-56 224.9 613 29.9
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 2.8e-56 224.2 595 51.6
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.4e-55 221.9 609 41.2
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 3.1e-55 220.7 604 50.8
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 4.0e-55 220.3 595 50.4
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 4.0e-55 220.3 604 50.7
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 4.0e-55 220.3 608 37.2
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 5.2e-55 219.9 580 50.3
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 5.2e-55 219.9 586 53.4
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 1.5e-54 218.4 579 44.9
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 2.0e-54 218.0 609 37.6
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 3.4e-54 217.2 607 42.8
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 4.4e-54 216.9 619 40.1
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 9.8e-54 215.7 536 58.4
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 1.3e-53 215.3 603 51.4
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.7e-53 214.9 614 46.9
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 1.7e-53 214.9 591 44.5
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 2.2e-53 214.5 585 53.5
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 2.2e-53 214.5 530 49.6
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 3.7e-53 213.8 581 44.1
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 4.9e-53 213.4 328 51.8
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 6.4e-53 213.0 602 47.5
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 6.4e-53 213.0 329 50.2
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 8.3e-53 212.6 583 54.5
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 1.9e-52 211.5 326 65.3
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 7.8e-51 206.1 526 50.2
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 3.9e-50 203.8 580 53.3
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 5.1e-50 203.4 626 40.1
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 3.3e-49 200.7 606 45.2
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 4.3e-49 200.3 589 47.0
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 7.3e-49 199.5 626 42.2
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 4.4e-46 190.3 621 44.6
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 4.4e-46 190.3 329 58.1
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 5.8e-46 189.9 580 42.6
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 1.4e-44 185.3 536 42.5
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 3.9e-42 177.2 590 46.6
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 2.5e-41 174.5 614 53.3
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 1.6e-40 171.8 613 45.4
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 9.9e-38 162.5 595 44.2
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 1.7e-37 161.8 540 44.1
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 3.5e-35 154.1 150 52.7
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 3.5e-35 154.1 150 52.7
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 1.3e-34 152.1 589 44.8
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 1.1e-33 149.1 605 46.8
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 8.1e-32 142.9 529 37.2
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 9.9e-30 136.0 374 41.7
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 2.4e-28 131.3 552 48.7
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 1.0e-26 125.9 526 42.8
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 1.0e-26 125.9 326 43.9
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 8.7e-26 122.9 516 45.7
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 1.5e-25 122.1 373 36.2
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 1.6e-24 118.6 153 45.1
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 3.3e-17 94.4 371 36.1
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 1.2e-14 85.9 322 21.7
BcaNung04238 Brassica carinata HOM05D006572 ORTHO05D008181 1.3e-13 82.4 86 55.8
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.7e-13 82.0 338 37.6
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 7.4e-09 66.6 109 37.6
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 1.3e-08 65.9 58 55.2
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 3.7e-08 64.3 58 53.4
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.5e-06 58.9 104 40.4
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 4.5e-06 57.4 90 35.6
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 1.0e-05 56.2 103 35.0


User provided reference genes

Program Settings