Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G6950 Aethionema arabicum HOM05D001031 ORTHO05D000857 4.7e-68 261.2 140 100.0
Thhalv10025754m.g Eutrema salsugineum HOM05D001031 ORTHO05D000857 4.8e-36 154.8 150 56.0
BraA03t14536Z Brassica rapa HOM05D001031 ORTHO05D000857 4.0e-35 151.8 150 54.7
AT4G23720 Arabidopsis thaliana HOM05D001031 ORTHO05D000857 1.2e-34 150.2 150 54.7
C07p53030 Brassica napus HOM05D001031 ORTHO05D000857 2.0e-34 149.4 150 55.3
BolC7t45801H Brassica oleracea HOM05D001031 ORTHO05D000857 2.0e-34 149.4 150 55.3
BcaNung03188 Brassica carinata HOM05D001031 ORTHO05D000857 3.4e-34 148.7 150 55.3
Sp7g21650 Schrenkiella parvula HOM05D001031 ORTHO05D000857 5.8e-34 147.9 150 56.0
A03p54690 Brassica napus HOM05D001031 ORTHO05D000857 7.6e-34 147.5 148 54.1
Carub.0007s1740 Capsella rubella HOM05D001031 ORTHO05D000857 1.4e-32 143.3 150 54.7
AL7G29630 Arabidopsis lyrata HOM05D001031 ORTHO05D000857 4.2e-32 141.7 150 52.7
CARHR231110 Cardamine hirsuta HOM05D001031 ORTHO05D000857 7.1e-32 141.0 146 52.1
THA.LOC104814855 Tarenaya hassleriana HOM05D001031 ORTHO05D000857 2.1e-28 129.4 140 50.7
BcaNung03186 Brassica carinata HOM05D001031 ORTHO05D000857 5.8e-18 94.7 91 57.1
Phvul.002G295100 Phaseolus vulgaris HOM05D001031 ORTHO05D000857 9.3e-16 87.4 121 41.3
VMungo0251G2934 Vigna mungo HOM05D001031 ORTHO05D000857 1.6e-15 86.7 121 38.8
Glyma.08G020400 Glycine max HOM05D001031 ORTHO05D000857 2.1e-15 86.3 121 39.7
Glyma.05G213900 Glycine max HOM05D001031 ORTHO05D000857 2.7e-15 85.9 121 39.7
ClCG07G014790 Citrullus lanatus HOM05D001031 ORTHO05D000857 1.8e-14 83.2 138 35.5
Lalb_Chr05g0224331 Lupinus albus HOM05D001031 ORTHO05D000857 3.9e-14 82.0 115 38.3
CiPaw.11G125900 Carya illinoinensis HOM05D001031 ORTHO05D000857 8.7e-14 80.9 121 33.9
Prupe.5G112200 Prunus persica HOM05D001031 ORTHO05D000857 8.7e-14 80.9 125 38.4
Sed0015825 Sechium edule HOM05D001031 ORTHO05D000857 1.9e-13 79.7 138 35.5
Gohir.A02G102901 Gossypium hirsutum HOM05D001031 ORTHO05D000857 2.5e-13 79.3 117 36.8
MD14G1117800 Malus domestica HOM05D001031 ORTHO05D000857 2.5e-13 79.3 125 37.6
Gohir.D03G081000 Gossypium hirsutum HOM05D001031 ORTHO05D000857 4.3e-13 78.6 117 36.8
Gorai.003G082800 Gossypium raimondii HOM05D001031 ORTHO05D000857 4.3e-13 78.6 117 36.8
MELO3C016318.2 Cucumis melo HOM05D001031 ORTHO05D000857 5.7e-13 78.2 138 36.2
Lj4g0028162 Lotus japonicus HOM05D001031 ORTHO05D000857 7.4e-13 77.8 118 39.0
Cfa012284 Carpinus fangiana HOM05D001031 ORTHO05D000857 3.7e-12 75.5 128 35.9
Lalb_Chr16g0390401 Lupinus albus HOM05D001031 ORTHO05D000857 3.7e-12 75.5 122 37.7
CsaV3_4G006320 Cucumis sativus L. HOM05D001031 ORTHO05D000857 4.8e-12 75.1 138 33.3
Duzib205G0348 Durio zibethinus HOM05D001031 ORTHO05D000857 6.3e-12 74.7 134 34.3
Potri.001G096000 Populus trichocarpa HOM05D001031 ORTHO05D000857 6.3e-12 74.7 125 34.4
COL.COLO4_21744 Corchorus olitorius HOM05D001031 ORTHO05D000857 8.2e-12 74.3 136 32.4
Dinv37562 Davidia involucrata HOM05D001597 ORTHO05D001512 1.1e-11 73.9 119 37.0
Haze_08700 Corylus avellana HOM05D001031 ORTHO05D000857 1.8e-11 73.2 128 35.9
Nitab4.5_0000223g0020 Nicotiana tabacum HOM05D001597 ORTHO05D001512 2.4e-11 72.8 132 37.9
QL02p031937 Quercus lobata HOM05D001031 ORTHO05D000857 3.1e-11 72.4 119 36.1
Sabra01G0071600 Salix brachista HOM05D001031 ORTHO05D000857 4.1e-11 72.0 129 33.3
Thecc.03G290900 Theobroma cacao HOM05D001031 ORTHO05D000857 4.1e-11 72.0 136 33.8
Manes.02G013832 Manihot esculenta HOM05D001031 ORTHO05D000857 5.3e-11 71.6 130 35.4
Nitab4.5_0002564g0060 Nicotiana tabacum HOM05D001597 ORTHO05D001512 5.3e-11 71.6 132 37.9
TPR.G3390 Trifolium pratense HOM05D001031 ORTHO05D000857 5.3e-11 71.6 134 33.6
Oeu003350.1 Olea europaea HOM05D001031 ORTHO05D000857 6.9e-11 71.2 132 34.1
Solyc08g081850.1 Solanum lycopersicum HOM05D001031 ORTHO05D000857 1.2e-10 70.5 138 31.9
Sabra01G0071800 Salix brachista HOM05D001031 ORTHO05D000857 1.5e-10 70.1 129 32.6
Actinidia04221 Actinidia chinensis HOM05D001597 ORTHO05D001512 2.0e-10 69.7 134 36.6
Peaxi162Scf00074g00142 Petunia axillaris HOM05D001031 ORTHO05D000857 2.0e-10 69.7 131 33.6
Psat7g028520 Pisum sativum HOM05D001031 ORTHO05D000857 2.0e-10 69.7 118 36.4
RcHm_v2.0_Chr7g0195831 Rosa chinensis HOM05D001031 ORTHO05D000857 2.0e-10 69.7 126 35.7
Cpa.g.sc122.19 Carica papaya HOM05D001031 ORTHO05D000857 3.4e-10 68.9 135 33.3
Ciclev10024134m.g Citrus clementina HOM05D001031 ORTHO05D000857 4.5e-10 68.6 121 33.9
Ca_17503_v3 Cicer arietinum L. HOM05D001031 ORTHO05D000857 5.9e-10 68.2 118 36.4
Rhsim02G0239500 Rhododendron simsii HOM05D001031 ORTHO05D000857 1.3e-09 67.0 134 35.8
Cpa.g.sc184.2 Carica papaya HOM05D001031 ORTHO05D000857 2.9e-09 65.9 131 32.8
CANSAT21G0739 Cannabis sativa HOM05D001031 ORTHO05D000857 3.8e-09 65.5 128 35.2
Cc08_g15590 Coffea canephora HOM05D001597 ORTHO05D001512 6.5e-09 64.7 117 33.3
SGA_v2.0_scaffold4G02261 Striga asiatica HOM05D001031 ORTHO05D000857 6.5e-09 64.7 114 36.0
FAN04G0816 Fragaria x ananassa HOM05D001031 ORTHO05D000857 1.4e-08 63.5 125 33.6
CAN.G532.59 Capsicum annuum HOM05D001031 ORTHO05D000857 2.5e-08 62.8 135 32.6
Potri.003G135400 Populus trichocarpa HOM05D001031 ORTHO05D000857 3.2e-08 62.4 120 30.0
Sopen08g030160 Solanum pennellii HOM05D001031 ORTHO05D000857 3.2e-08 62.4 134 29.9
Cc02_g38870 Coffea canephora HOM05D001031 ORTHO05D000857 5.5e-08 61.6 143 28.7
FvH4_5g03780 Fragaria vesca HOM05D001031 ORTHO05D000857 7.2e-08 61.2 125 32.8
FAN13G1297 Fragaria x ananassa HOM05D001031 ORTHO05D000857 7.2e-08 61.2 125 32.8
FAN18G1936 Fragaria x ananassa HOM05D001031 ORTHO05D000857 7.2e-08 61.2 125 32.8
MSTRG.11942 Avicennia marina HOM05D001031 ORTHO05D000857 9.3e-08 60.8 117 34.2
Duzib268G1251 Durio zibethinus HOM05D001031 ORTHO05D000857 9.3e-08 60.8 136 31.6
Sabra03G0097600 Salix brachista HOM05D001031 ORTHO05D000857 9.3e-08 60.8 98 31.6
Thecc.01G348700 Theobroma cacao HOM05D001031 ORTHO05D000857 9.3e-08 60.8 135 32.6
Oeu063056.1 Olea europaea HOM05D001031 ORTHO05D000857 1.2e-07 60.5 139 33.1
FAN13G2932 Fragaria x ananassa HOM05D001031 ORTHO05D000857 1.6e-07 60.1 125 32.8
Aqoxy7G00211 Aquilegia oxysepala HOM05D001031 ORTHO05D000857 4.6e-07 58.5 122 36.1
Manes.05G026800 Manihot esculenta HOM05D001031 ORTHO05D000857 6.1e-07 58.2 120 29.2
Ciclev10023512m.g Citrus clementina HOM05D001031 ORTHO05D000857 1.0e-06 57.4 127 30.7
Eucgr.D01780 Eucalyptus grandis HOM05D001031 ORTHO05D000857 1.3e-06 57.0 137 29.2
SalBow8G2934 Salvia bowleyana HOM05D001031 ORTHO05D000857 2.3e-06 56.2 135 30.4
PGR031G0286 Punica granatum HOM05D001031 ORTHO05D000857 6.7e-06 54.7 123 31.7
Hma1.2p1_0216F.1_g091380 Hydrangea macrophylla HOM05D001031 ORTHO05D000857 8.7e-06 54.3 123 30.9


User provided reference genes

Program Settings