Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G6680 Aethionema arabicum HOM05D007942 ORTHO05D010045 6.1e-42 173.7 86 100.0
BcaC09g50992 Brassica carinata HOM05D007942 ORTHO05D010045 4.5e-29 131.0 85 75.3
Thhalv10026690m.g Eutrema salsugineum HOM05D007942 ORTHO05D010045 2.9e-28 128.3 85 76.5
C01p18220 Brassica napus HOM05D007942 ORTHO05D010045 1.1e-27 126.3 86 74.4
BolC1t01748H Brassica oleracea HOM05D007942 ORTHO05D010045 1.1e-27 126.3 86 74.4
A01p14720 Brassica napus HOM05D007942 ORTHO05D010045 3.2e-27 124.8 86 73.3
BraA01t01411Z Brassica rapa HOM05D007942 ORTHO05D010045 3.2e-27 124.8 86 73.3
AL7G29970 Arabidopsis lyrata HOM05D007942 ORTHO05D010045 4.2e-27 124.4 86 75.6
AT4G23493 Arabidopsis thaliana HOM05D007942 ORTHO05D010045 9.4e-27 123.2 86 74.4
Carub.0007s1768 Capsella rubella HOM05D007942 ORTHO05D010045 9.4e-27 123.2 85 70.6
BcaNung01050 Brassica carinata HOM05D007942 ORTHO05D010045 6.1e-26 120.6 85 70.6
BcaB03g11761 Brassica carinata HOM05D007942 ORTHO05D010045 4.0e-25 117.9 85 70.6
BcaB03g11762 Brassica carinata HOM05D007942 ORTHO05D010045 4.0e-25 117.9 85 70.6
CARHR230820 Cardamine hirsuta HOM05D007942 ORTHO05D010045 1.5e-24 115.9 86 68.6
BcaC01g00815 Brassica carinata HOM05D007942 ORTHO05D010045 4.8e-23 110.9 85 67.1
A08p16150 Brassica napus HOM05D007942 ORTHO05D010045 1.8e-22 109.0 86 67.4
C03p84680 Brassica napus HOM05D007942 ORTHO05D010045 1.8e-22 109.0 86 67.4
BolC3t20755H Brassica oleracea HOM05D007942 ORTHO05D010045 1.8e-22 109.0 86 67.4
THA.LOC104814669 Tarenaya hassleriana HOM05D007942 ORTHO05D010045 5.3e-22 107.5 91 61.5
Ciclev10023096m.g Citrus clementina HOM05D007942 ORTHO05D010045 1.0e-12 76.6 80 52.5
Nitab4.5_0002282g0090 Nicotiana tabacum HOM05D007942 ORTHO05D010045 1.7e-12 75.9 81 49.4
MD06G1089100 Malus domestica HOM05D007942 ORTHO05D010045 2.9e-12 75.1 81 51.9
Solyc08g081455.1 Solanum lycopersicum HOM05D007942 ORTHO05D010045 6.6e-12 73.9 81 49.4
PGSC0003DMG400012189 Solanum tuberosum HOM05D007942 ORTHO05D010045 8.6e-12 73.6 81 48.1
Gohir.A08G115301 Gossypium hirsutum HOM05D007942 ORTHO05D010045 1.5e-11 72.8 81 48.1
Nitab4.5_0000769g0190 Nicotiana tabacum HOM05D007942 ORTHO05D010045 1.9e-11 72.4 81 46.9
Sopen08g029790 Solanum pennellii HOM05D007942 ORTHO05D010045 2.5e-11 72.0 81 48.1
Gorai.004G139100 Gossypium raimondii HOM05D007942 ORTHO05D010045 1.6e-10 69.3 81 46.9
Hund11441 Selenicereus undatus HOM05D007942 ORTHO05D010045 2.1e-10 68.9 75 44.0
SGA_v2.0_scaffold111G31481 Striga asiatica HOM05D007942 ORTHO05D010045 4.7e-10 67.8 79 45.6
CAN.G532.20 Capsicum annuum HOM05D007942 ORTHO05D010045 1.4e-09 66.2 67 50.7
AUR62010730 Chenopodium quinoa HOM05D007942 ORTHO05D010045 2.3e-09 65.5 74 40.5
Peaxi162Scf00074g01832 Petunia axillaris HOM05D007942 ORTHO05D010045 5.2e-09 64.3 63 47.6
Psat2g183000 Pisum sativum HOM05D007942 ORTHO05D010045 6.8e-09 63.9 80 40.0
Thecc.03G284800 Theobroma cacao HOM05D007942 ORTHO05D010045 1.5e-08 62.8 81 43.2
Cpa.g.sc180.26 Carica papaya HOM05D007942 ORTHO05D010045 2.0e-08 62.4 81 40.7
EL10Ac5g12820 Beta vulgaris HOM05D007942 ORTHO05D010045 2.6e-08 62.0 75 40.0
TWI81G0525 Tripterygium wilfordii HOM05D007942 ORTHO05D010045 2.6e-08 62.0 79 46.8
Cc03_g15820 Coffea canephora HOM05D007942 ORTHO05D010045 4.4e-08 61.2 67 46.3
Cc08_g15120 Coffea canephora HOM05D007942 ORTHO05D010045 4.4e-08 61.2 67 46.3
SalBow8G0610 Salvia bowleyana HOM05D007942 ORTHO05D010045 4.4e-08 61.2 81 43.2
GSVIVG01019402001 Vitis vinifera HOM05D007942 ORTHO05D010045 5.7e-08 60.8 81 43.2
Haze_08827 Corylus avellana HOM05D007942 ORTHO05D010045 7.5e-08 60.5 81 44.4
Manes.02G018400 Manihot esculenta HOM05D007942 ORTHO05D010045 9.8e-08 60.1 81 42.0
Prupe.5G105000 Prunus persica HOM05D007942 ORTHO05D010045 9.8e-08 60.1 82 45.1
ClCG01G002420 Citrullus lanatus HOM05D007942 ORTHO05D010045 1.3e-07 59.7 78 43.6
Eucgr.E00650 Eucalyptus grandis HOM05D007942 ORTHO05D010045 1.7e-07 59.3 81 39.5
Ah.07g196590 Amaranthus hybridus HOM05D007942 ORTHO05D010045 2.2e-07 58.9 72 36.1
Dinv37608 Davidia involucrata HOM05D007942 ORTHO05D010045 2.2e-07 58.9 81 39.5
RcHm_v2.0_Chr7g0196851 Rosa chinensis HOM05D007942 ORTHO05D010045 2.2e-07 58.9 83 43.4
Atru.chr9.2136 Acer truncatum HOM05D007942 ORTHO05D010045 2.8e-07 58.5 81 40.7
Lsat_1_v5_gn_6_85240 Lactuca sativa HOM05D007942 ORTHO05D010045 3.7e-07 58.2 75 41.3
Potri.003G131550 Populus trichocarpa HOM05D007942 ORTHO05D010045 3.7e-07 58.2 81 42.0
HanXRQChr13g0415991 Helianthus annuus HOM05D007942 ORTHO05D010045 1.1e-06 56.6 85 35.3
Lsat_1_v5_gn_6_85200 Lactuca sativa HOM05D007942 ORTHO05D010045 1.1e-06 56.6 60 43.3
Glyma.01G221800 Glycine max HOM05D007942 ORTHO05D010045 1.4e-06 56.2 82 37.8
Medtr5g010040 Medicago truncatula HOM05D007942 ORTHO05D010045 3.1e-06 55.1 80 36.2
TPR.G6630 Trifolium pratense HOM05D007942 ORTHO05D010045 3.1e-06 55.1 75 41.3
Ca_24542_v3 Cicer arietinum L. HOM05D007942 ORTHO05D010045 5.4e-06 54.3 80 37.5
MELO3C005703.2 Cucumis melo HOM05D007942 ORTHO05D010045 5.4e-06 54.3 78 41.0
DCAR_004614 Daucus carota HOM05D007942 ORTHO05D010045 5.4e-06 54.3 59 52.5


User provided reference genes

Program Settings