Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G60 Aethionema arabicum HOM05D004683 ORTHO05D005388 1.7e-203 712.6 397 100.0
AT4G17240 Arabidopsis thaliana HOM05D004683 ORTHO05D005388 2.3e-107 393.3 399 62.7
AL7G37470 Arabidopsis lyrata HOM05D004683 ORTHO05D005388 2.9e-107 392.9 399 62.9
Carub.0007s2417 Capsella rubella HOM05D004683 ORTHO05D005388 2.5e-106 389.8 399 61.7
CARHR223850 Cardamine hirsuta HOM05D004683 ORTHO05D005388 3.3e-106 389.4 399 63.2
Thhalv10025641m.g Eutrema salsugineum HOM05D004683 ORTHO05D005388 1.6e-105 387.1 398 61.3
THA.LOC104806735 Tarenaya hassleriana HOM05D004683 ORTHO05D005388 2.1e-105 386.7 410 59.5
Sp7g16950 Schrenkiella parvula HOM05D004683 ORTHO05D005388 3.4e-103 379.4 394 62.2
BcaC09g50454 Brassica carinata HOM05D004683 ORTHO05D005388 7.8e-100 368.2 400 61.0
C01p25270 Brassica napus HOM05D004683 ORTHO05D005388 7.8e-100 368.2 400 61.0
BolC1t02477H Brassica oleracea HOM05D004683 ORTHO05D005388 1.0e-99 367.9 400 61.0
A01p20140 Brassica napus HOM05D004683 ORTHO05D005388 3.9e-99 365.9 400 60.8
BraA01t01938Z Brassica rapa HOM05D004683 ORTHO05D005388 2.2e-94 350.1 357 62.7
Manes.09G081701 Manihot esculenta HOM05D004683 ORTHO05D005388 3.2e-77 293.1 412 49.8
Duzib160G0680 Durio zibethinus HOM05D004683 ORTHO05D005388 1.0e-75 288.1 412 49.5
MD10G1336700 Malus domestica HOM05D004683 ORTHO05D005388 5.1e-75 285.8 391 50.1
RcHm_v2.0_Chr5g0000761 Rosa chinensis HOM05D004683 ORTHO05D005388 3.3e-74 283.1 332 54.5
FAN25G2373 Fragaria x ananassa HOM05D004683 ORTHO05D005388 5.6e-74 282.3 330 54.2
Prupe.4G006700 Prunus persica HOM05D004683 ORTHO05D005388 2.8e-73 280.0 392 49.5
Potri.016G008400 Populus trichocarpa HOM05D004683 ORTHO05D005388 3.6e-73 279.6 413 49.4
Duzib235G0361 Durio zibethinus HOM05D004683 ORTHO05D005388 1.1e-72 278.1 407 49.4
ClCG01G010700 Citrullus lanatus HOM05D004683 ORTHO05D005388 1.4e-72 277.7 406 49.0
MELO3C025532.2 Cucumis melo HOM05D004683 ORTHO05D005388 1.4e-72 277.7 409 48.7
Cfa000066 Carpinus fangiana HOM05D004683 ORTHO05D005388 5.2e-72 275.8 414 46.4
Gorai.010G188900 Gossypium raimondii HOM05D004683 ORTHO05D005388 5.2e-72 275.8 339 53.1
FvH4_3g00551 Fragaria vesca HOM05D004683 ORTHO05D005388 6.8e-72 275.4 331 52.9
Sed0018998 Sechium edule HOM05D004683 ORTHO05D005388 6.8e-72 275.4 408 49.3
Gohir.A10G008300 Gossypium hirsutum HOM05D004683 ORTHO05D005388 1.5e-71 274.2 337 53.7
Dinv04407 Davidia involucrata HOM05D004683 ORTHO05D005388 4.4e-71 272.7 350 51.4
CSS0018655 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.8e-71 272.3 349 51.3
Potri.006G017200 Populus trichocarpa HOM05D004683 ORTHO05D005388 5.8e-71 272.3 410 47.6
Gohir.A06G155500 Gossypium hirsutum HOM05D004683 ORTHO05D005388 9.9e-71 271.6 339 52.5
MD00G1058000 Malus domestica HOM05D004683 ORTHO05D005388 9.9e-71 271.6 408 46.8
Sabra06G0012200 Salix brachista HOM05D004683 ORTHO05D005388 9.9e-71 271.6 408 47.5
Gohir.D06G161900 Gossypium hirsutum HOM05D004683 ORTHO05D005388 2.2e-70 270.4 338 52.1
Nn1g07478 Nelumbo nucifera HOM05D004683 ORTHO05D005388 2.2e-70 270.4 433 46.7
Gohir.D10G008100 Gossypium hirsutum HOM05D004683 ORTHO05D005388 3.8e-70 269.6 350 53.1
CsaV3_UNG061480 Cucumis sativus L. HOM05D004683 ORTHO05D005388 4.9e-70 269.2 405 48.4
PGR004G0928 Punica granatum HOM05D004683 ORTHO05D005388 4.9e-70 269.2 425 48.9
CsaV3_1G015800 Cucumis sativus L. HOM05D004683 ORTHO05D005388 6.4e-70 268.9 357 51.8
MBI19_g44082_MAGBIO Magnolia biondii HOM05D004683 ORTHO05D005388 1.9e-69 267.3 418 46.7
CSS0016540 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.4e-69 266.9 389 47.8
Gorai.011G008800 Gossypium raimondii HOM05D004683 ORTHO05D005388 9.3e-69 265.0 350 52.9
COL.COLO4_15259 Corchorus olitorius HOM05D004683 ORTHO05D005388 2.1e-68 263.8 416 51.2
Thecc.06G237400 Theobroma cacao HOM05D004683 ORTHO05D005388 4.6e-68 262.7 414 50.0
Phvul.006G141000 Phaseolus vulgaris HOM05D004683 ORTHO05D005388 1.3e-67 261.2 398 49.0
GSVIVG01007216001 Vitis vinifera HOM05D004683 ORTHO05D005388 1.3e-67 261.2 355 48.2
TAR626G1909 Trochodendron aralioides HOM05D004683 ORTHO05D005388 8.7e-67 258.5 429 45.7
Atru.chr1.2335 Acer truncatum HOM05D004683 ORTHO05D005388 1.5e-66 257.7 424 46.9
Sabra16G0012800 Salix brachista HOM05D004683 ORTHO05D005388 2.5e-66 256.9 426 46.2
Actinidia11898 Actinidia chinensis HOM05D004683 ORTHO05D005388 1.3e-65 254.6 402 46.5
Lsat_1_v5_gn_7_14120 Lactuca sativa HOM05D004683 ORTHO05D005388 3.6e-65 253.1 346 49.7
Actinidia39280 Actinidia chinensis HOM05D004683 ORTHO05D005388 8.1e-65 251.9 392 46.7
CAN.G696.10 Capsicum annuum HOM05D004683 ORTHO05D005388 1.8e-64 250.8 426 45.8
Lj6g0001835 Lotus japonicus HOM05D004683 ORTHO05D005388 1.8e-64 250.8 397 50.6
Aqoxy4G02236 Aquilegia oxysepala HOM05D004683 ORTHO05D005388 2.4e-64 250.4 434 43.8
Nitab4.5_0001668g0040 Nicotiana tabacum HOM05D004683 ORTHO05D005388 3.1e-64 250.0 413 45.5
CANSAT56G4109 Cannabis sativa HOM05D004683 ORTHO05D005388 9.0e-64 248.4 415 44.6
CiPaw.09G105900 Carya illinoinensis HOM05D004683 ORTHO05D005388 1.5e-63 247.7 422 44.1
Peaxi162Scf00352g01036 Petunia axillaris HOM05D004683 ORTHO05D005388 2.6e-63 246.9 396 46.2
Solyc11g012610.2 Solanum lycopersicum HOM05D004683 ORTHO05D005388 5.8e-63 245.7 419 45.1
Lj2A259T33 Lonicera japonica HOM05D004683 ORTHO05D005388 1.7e-62 244.2 415 46.3
CSS0042800 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.9e-62 243.4 321 51.4
SalBow8G0627 Salvia bowleyana HOM05D004683 ORTHO05D005388 6.4e-62 242.3 347 48.7
PGSC0003DMG400013358 Solanum tuberosum HOM05D004683 ORTHO05D005388 8.4e-62 241.9 420 44.8
BcaNung00108 Brassica carinata HOM05D004683 ORTHO05D005388 1.1e-61 241.5 236 63.6
TWI38G0781 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 1.9e-61 240.7 418 43.8
SGA_v2.0_scaffold7G03714 Striga asiatica HOM05D004683 ORTHO05D005388 2.4e-61 240.4 338 49.1
Lsat_1_v5_gn_0_24381 Lactuca sativa HOM05D004683 ORTHO05D005388 9.3e-61 238.4 338 49.7
PGSC0003DMG400023555 Solanum tuberosum HOM05D004683 ORTHO05D005388 9.3e-61 238.4 402 44.8
Eucgr.D01443 Eucalyptus grandis HOM05D004683 ORTHO05D005388 1.2e-60 238.0 343 47.8
Peaxi162Scf01544g00025 Petunia axillaris HOM05D004683 ORTHO05D005388 2.7e-60 236.9 343 48.1
Sc05g0009730 Simmondsia chinensis HOM05D004683 ORTHO05D005388 1.7e-59 234.2 334 46.1
Oeu052866.1 Olea europaea HOM05D004683 ORTHO05D005388 3.9e-59 233.0 430 47.2
Oeu052851.1 Olea europaea HOM05D004683 ORTHO05D005388 1.5e-58 231.1 420 47.9
Medtr2g026550 Medicago truncatula HOM05D004683 ORTHO05D005388 3.6e-57 226.5 367 45.5
Hma1.2p1_0657F.1_g196900 Hydrangea macrophylla HOM05D004683 ORTHO05D005388 6.2e-57 225.7 425 42.6
Cc09_g00590 Coffea canephora HOM05D004683 ORTHO05D005388 8.1e-57 225.3 360 46.7
DCAR_030854 Daucus carota HOM05D004683 ORTHO05D005388 1.8e-56 224.2 408 43.1
Lalb_Chr15g0088101 Lupinus albus HOM05D004683 ORTHO05D005388 1.8e-56 224.2 396 46.5
Cpa.g.sc27.252 Carica papaya HOM05D004683 ORTHO05D005388 2.4e-56 223.8 311 49.8
arahy.Tifrunner.gnm1.ann1.5M71YA Arachis hypogaea HOM05D004683 ORTHO05D005388 1.2e-55 221.5 397 43.3
AUR62012829 Chenopodium quinoa HOM05D004683 ORTHO05D005388 2.6e-55 220.3 333 45.9
AUR62021828 Chenopodium quinoa HOM05D004683 ORTHO05D005388 2.6e-55 220.3 333 46.2
arahy.Tifrunner.gnm1.ann1.L4TARN Arachis hypogaea HOM05D004683 ORTHO05D005388 9.9e-55 218.4 397 43.1
PSO541G4951 Papaver somniferum HOM05D004683 ORTHO05D005388 9.9e-55 218.4 363 46.0
Haze_06980 Corylus avellana HOM05D004683 ORTHO05D005388 6.4e-54 215.7 384 40.4
PSO675G6369 Papaver somniferum HOM05D004683 ORTHO05D005388 6.4e-54 215.7 363 45.5
Nitab4.5_0004646g0030 Nicotiana tabacum HOM05D004683 ORTHO05D005388 1.9e-53 214.2 339 46.9
HanXRQChr15g0470281 Helianthus annuus HOM05D004683 ORTHO05D005388 3.5e-52 209.9 360 44.7
TWI63G0041 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 4.6e-52 209.5 413 41.9
Sabra16G0012500 Salix brachista HOM05D004683 ORTHO05D005388 7.9e-52 208.8 266 54.5
ATR0624G003 Amborella trichopoda HOM05D004683 ORTHO05D005388 1.0e-51 208.4 326 45.4
QL05p068304 Quercus lobata HOM05D004683 ORTHO05D005388 3.0e-51 206.8 427 40.7
TPR.G10575 Trifolium pratense HOM05D004683 ORTHO05D005388 1.5e-50 204.5 369 42.5
CDE04G2289 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 1.9e-50 204.1 323 45.8
Psat1g173720 Pisum sativum HOM05D004683 ORTHO05D005388 2.5e-50 203.8 328 43.9
Oeu030103.1 Olea europaea HOM05D004683 ORTHO05D005388 5.6e-50 202.6 413 40.0
Ah.14g087460 Amaranthus hybridus HOM05D004683 ORTHO05D005388 7.4e-50 202.2 418 39.5
HPP92_014031 Vanilla planifolia HOM05D004683 ORTHO05D005388 1.3e-49 201.4 336 44.0
HPP92_028363 Vanilla planifolia HOM05D004683 ORTHO05D005388 1.6e-49 201.1 396 40.2
QL05p068796 Quercus lobata HOM05D004683 ORTHO05D005388 2.1e-49 200.7 418 40.7
Migut.M01430 Erythranthe guttata HOM05D004683 ORTHO05D005388 1.1e-48 198.4 338 44.1
Hund21139 Selenicereus undatus HOM05D004683 ORTHO05D005388 4.0e-48 196.4 418 39.7
Sopen04g006980 Solanum pennellii HOM05D004683 ORTHO05D005388 4.5e-47 193.0 394 40.4
EL10Ac8g20240 Beta vulgaris HOM05D004683 ORTHO05D005388 2.2e-46 190.7 414 39.4
Solyc04g014850.3 Solanum lycopersicum HOM05D004683 ORTHO05D005388 6.5e-46 189.1 394 40.1
Glyma.15G117000 Glycine max HOM05D004683 ORTHO05D005388 1.2e-44 184.9 404 40.3
Glyma.09G012400 Glycine max HOM05D004683 ORTHO05D005388 6.0e-44 182.6 391 42.5
CDE06G0298 Ceratophyllum demersum HOM05D000165 ORTHO05D005388 2.3e-43 180.6 241 50.2
unitig_37.g12183 Utricularia gibba HOM05D004683 ORTHO05D005388 8.7e-43 178.7 226 50.9
Rhsim02G0091200 Rhododendron simsii HOM05D004683 ORTHO05D005388 4.3e-42 176.4 426 38.5
Ah.09g234040 Amaranthus hybridus HOM05D004683 ORTHO05D005388 9.6e-42 175.3 342 39.8
VMungo0540G0168 Vigna mungo HOM05D004683 ORTHO05D005388 9.6e-42 175.3 397 39.5
MSTRG.7144 Avicennia marina HOM05D004683 ORTHO05D005388 4.8e-41 172.9 294 43.5
Ca_00746_v3 Cicer arietinum L. HOM05D004683 ORTHO05D005388 4.8e-41 172.9 255 47.8
TAR341G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 8.2e-41 172.2 285 47.0
TAR485G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 8.2e-41 172.2 285 47.0
Ciclev10017876m.g Citrus clementina HOM05D004683 ORTHO05D005388 2.6e-39 167.2 350 42.3
vmacro15736 Vaccinium macrocarpon HOM05D004683 ORTHO05D005388 4.2e-37 159.8 369 39.3
CAN.G1263.24 Capsicum annuum HOM05D004683 ORTHO05D005388 3.5e-36 156.8 346 38.2
ECA246G4668 Erigeron canadensis HOM05D004683 ORTHO05D005388 1.3e-33 148.3 276 40.6
Zm00001eb057420 Zea mays HOM05D004683 ORTHO05D005388 9.0e-32 142.1 391 35.3
Nitab4.5_0001109g0120 Nicotiana tabacum HOM05D004683 ORTHO05D005388 2.0e-31 141.0 403 36.2
Zm00001eb214850 Zea mays HOM05D004683 ORTHO05D005388 5.9e-31 139.4 332 37.7
SEGI_35929 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 4.2e-29 133.3 276 38.0
Sopen11g007340 Solanum pennellii HOM05D004683 ORTHO05D005388 6.1e-28 129.4 193 45.6
PSO339G0967 Papaver somniferum HOM05D004683 ORTHO05D005388 8.8e-27 125.6 99 66.7
MSTRG.16041 Avicennia marina HOM05D004683 ORTHO05D005388 4.3e-26 123.2 196 45.4
MSTRG.14824 Avicennia marina HOM05D004683 ORTHO05D005388 1.7e-25 121.3 118 61.9
Os03g0750900 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 3.1e-24 117.1 198 43.4
CDE04G1899 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 1.4e-21 108.2 392 30.9
BcaNung00109 Brassica carinata HOM05D004683 ORTHO05D005388 9.4e-21 105.5 150 54.0
CDE07G1645 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 3.3e-18 97.1 186 40.3
CSS0001859 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.1e-16 92.0 219 37.9
CSS0027604 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.1e-16 92.0 219 37.9
A09p40660 Brassica napus HOM05D004683 ORTHO05D005388 5.9e-15 86.3 79 67.1
Sopen00g010710 Solanum pennellii HOM05D004683 ORTHO05D005388 5.0e-14 83.2 190 40.0
CSS0022133 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 8.5e-14 82.4 201 37.8
COL.COLO4_30227 Corchorus olitorius HOM05D001156 ORTHO05D001006 7.2e-13 79.3 102 51.0
CSS0011389 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.0e-11 75.5 106 43.4
SMO351G0434 Selaginella moellendorffii HOM05D025386 ORTHO05D005388 1.1e-10 72.0 211 32.2
Sabra19G0093600 Salix brachista HOM05D000057 ORTHO05D005388 4.4e-10 70.1 99 47.5
Os05g0547100 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 1.3e-09 68.6 165 37.0
AagrBONN_evm.TU.Sc2ySwM_117.2428 Anthoceros agrestis HOM05D025386 ORTHO05D026614 2.9e-06 57.4 136 33.8
Zm00001eb365900 Zea mays HOM05D004683 ORTHO05D005388 2.9e-06 57.4 115 36.5
CSS0009085 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.0e-06 56.6 200 31.5
FAN11G0338 Fragaria x ananassa HOM05D004683 ORTHO05D035386 5.0e-06 56.6 161 36.6
CSS0004114 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 6.5e-06 56.2 199 31.7
CSS0022243 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 6.5e-06 56.2 199 31.7


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