Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 6.8e-190 667.2 335 100.0
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 4.8e-151 538.1 335 81.2
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 8.1e-151 537.3 337 81.0
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 9.0e-150 533.9 335 80.6
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 1.3e-148 530.0 339 79.6
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.3e-148 530.0 334 80.8
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.4e-147 526.6 339 79.1
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 4.2e-147 525.0 342 79.8
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 7.1e-147 524.2 342 79.8
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 2.1e-146 522.7 342 79.2
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 5.1e-145 518.1 339 78.5
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.1e-142 510.4 337 77.4
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 8.2e-135 484.2 331 71.9
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 3.7e-127 458.8 321 70.7
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.4e-126 456.8 330 69.1
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 2.4e-126 456.1 307 72.3
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 4.1e-126 455.3 312 70.5
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 6.9e-126 454.5 307 72.0
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 9.1e-126 454.1 279 77.1
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.5e-125 453.4 312 71.2
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 3.4e-125 452.2 325 69.8
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 3.4e-125 452.2 281 75.1
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.0e-124 450.7 317 70.7
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 1.0e-124 450.7 335 68.1
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.3e-124 450.3 312 70.5
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.7e-124 449.9 283 75.6
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.2e-124 449.5 312 70.5
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 2.9e-124 449.1 337 71.8
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 3.8e-124 448.7 284 74.6
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 5.0e-124 448.4 312 70.2
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 6.5e-124 448.0 328 68.3
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 8.5e-124 447.6 297 71.7
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 8.5e-124 447.6 312 69.9
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.1e-123 447.2 333 66.7
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 1.1e-123 447.2 322 69.6
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.4e-123 446.8 279 74.6
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 2.5e-123 446.0 337 66.5
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 3.2e-123 445.7 334 66.2
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 5.5e-123 444.9 347 65.7
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 5.5e-123 444.9 297 72.7
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 7.2e-123 444.5 341 66.0
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.2e-122 443.7 311 70.7
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.2e-122 443.7 323 69.7
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.6e-122 443.4 281 74.0
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.1e-122 443.0 310 69.7
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 2.1e-122 443.0 326 67.5
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 2.1e-122 443.0 320 68.4
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 4.7e-122 441.8 318 70.1
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 7.9e-122 441.0 296 72.6
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.0e-121 440.7 319 69.6
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 1.0e-121 440.7 281 74.0
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.4e-121 440.3 279 73.8
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 1.8e-121 439.9 336 65.2
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 3.0e-121 439.1 306 70.9
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.2e-121 438.3 283 74.6
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 8.8e-121 437.6 279 73.5
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.1e-120 437.2 283 73.1
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.1e-120 437.2 255 79.6
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 2.6e-120 436.0 321 67.3
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 3.3e-120 435.6 379 60.9
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.3e-119 433.7 285 74.7
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.3e-119 433.7 327 65.4
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 1.3e-119 433.7 283 72.4
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.7e-119 433.3 288 72.6
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 2.8e-119 432.6 338 63.6
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 2.8e-119 432.6 338 63.6
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 6.3e-119 431.4 308 68.2
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.6e-117 426.8 281 70.8
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.3e-116 423.7 281 70.1
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 1.3e-116 423.7 264 75.4
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 5.0e-116 421.8 264 74.2
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.5e-115 420.2 319 66.8
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 1.9e-115 419.9 280 72.5
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 2.5e-115 419.5 313 65.5
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 5.5e-115 418.3 318 66.7
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.2e-114 417.2 306 65.7
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 2.1e-114 416.4 261 74.3
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 2.1e-114 416.4 318 64.5
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 4.7e-114 415.2 308 67.9
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.3e-113 412.9 304 66.8
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 3.3e-112 409.1 293 68.3
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 7.5e-112 407.9 406 54.4
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 3.7e-111 405.6 300 67.0
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 6.3e-111 404.8 263 73.4
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.0e-108 397.5 327 61.2
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 5.0e-108 395.2 279 68.8
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 2.5e-107 392.9 261 72.8
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 2.7e-106 389.4 260 68.8
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 8.8e-105 384.4 308 62.0
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 9.8e-104 380.9 401 49.9
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 2.2e-103 379.8 307 63.5
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.3e-100 370.5 229 77.3
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 1.9e-91 340.1 318 53.8
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 1.4e-89 334.0 258 59.3
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 2.9e-87 326.2 261 58.2
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 1.2e-85 320.9 313 56.2
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 4.6e-85 318.9 247 60.3
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 5.9e-85 318.5 275 58.9
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 3.9e-84 315.8 313 55.3
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.2e-82 310.8 325 52.6
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 8.0e-82 308.1 287 56.4
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.6e-72 276.6 157 78.3
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 2.8e-66 256.5 216 60.2
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 4.9e-63 245.7 153 74.5
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 4.4e-56 222.6 155 69.7
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 3.8e-55 219.5 267 43.8
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.1e-54 218.0 134 75.4
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 5.4e-54 215.7 135 75.6
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.5e-48 197.6 280 41.8
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 2.4e-46 190.3 134 64.2
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.9e-39 166.8 97 79.4
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 4.9e-31 139.4 259 35.5
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.9e-30 137.5 279 34.4
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 3.5e-29 133.3 250 32.0
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.0e-20 105.1 99 60.6
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 2.2e-15 87.4 75 48.0
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 9.7e-11 72.0 52 63.5


User provided reference genes

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